Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00203 ATGGATTTCTTACAGTCTTTAGATCCGCAAGTCCTTCTGGGTTTGGCTGTGGCTGTTTTAGCCCTTGCCGTTGGTTCTCTCTATGTATTATCCTCGTCTAAAAAAAGCAAATCCAGAGGTTGCTTGGATCCAGAGATATTCAAGGAGTTTAAACTTATTAAACGCGTGCAGCTGAGCCATAATGTGGCGAAGTTTACATTTACACTCCCCAATCCTACTTCAGTTTTGGGTCTTCCCATTGGACAACATATCAGTTGCAGGGGCAAGGATGGCCAAGGTGAAGAGGTCATCAAACCGTACACACCGATTACTTTGGACTCTGATGTTGGATATTTTGAGCTCGTCATAAAGATGTATCCCCAAGGAAGGATGTCGCATCATTTCCGACAGATGCGTGTTGGCGATTTTCTTGCTGTAAAGGGGCCCAAGGGGCGTTTCAGGTATCAACCTGGGCAGGTCCGAGCATTTGGGATGCTCGCTGGAGGCTCCGGCATTACTCCTATGTATCAAGTTGCTCGAGCAATATTAGAAAATCCAAATGACGAGACGAAAGTACATCTCATTTATGCCAACGTCACCTATGAGGACATTCTTTTAAAGGAGGAGTTGGATCTTCTTGCCAAAAGTTACCCAGATAGCTTCAAGCTCTATTATGTCTTAAACCAGCCTCCTGAAGAATGGGATGGTGGCGTCGGATTCGTATCGAAGGAGATGATTCAAACCCACTGCCCCGCTCCTGCTTCTGATATTCAGGTTTTAAGATGTGGGCCACCGCCAATGAATAAGGCCATGGGTGCTCATCTTGAAGCTCTTGGATATGCACCTGAGATGCTGTTCATGTTCTGA 846 45.86 MDFLQSLDPQVLLGLAVAVLALAVGSLYVLSSSKKSKSRGCLDPEIFKEFKLIKRVQLSHNVAKFTFTLPNPTSVLGLPIGQHISCRGKDGQGEEVIKPYTPITLDSDVGYFELVIKMYPQGRMSHHFRQMRVGDFLAVKGPKGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDETKVHLIYANVTYEDILLKEELDLLAKSYPDSFKLYYVLNQPPEEWDGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMGAHLEALGYAPEMLFMF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3329411 3335016 - CmoCh03G002030.1 Cmo03g00203 377666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00203 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Cmo03g00203 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 - -
Cmo03g00203 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 280 IPR039261 -
Cmo03g00203 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491
Cmo03g00203 281 CDD cyt_b5_reduct_like 50 281 - -
Cmo03g00203 281 Gene3D - 140 281 IPR039261 -
Cmo03g00203 281 SUPERFAMILY Riboflavin synthase domain-like 42 150 IPR017938 -
Cmo03g00203 281 Pfam Oxidoreductase NAD-binding domain 158 263 IPR001433 GO:0016491
Cmo03g00203 281 Gene3D Translation factors 40 139 - -
Cmo03g00203 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Cmo03g00203 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Cmo03g00203 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Cmo03g00203 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Cmo03g00203 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Cmo03g00203 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Cmo03g00203 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 281 IPR001834 GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00203 Cmo07g01169 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00203 Cmo-Chr3:3329411 Cmo06g00047 Cmo-Chr6:299972 1.81E-156 dispersed
Cmo03g00203 Cmo-Chr3:3329411 Cmo07g01169 Cmo-Chr7:6270399 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00203 K00326 - csv:101212569 504.212