Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00263 | ATGTTGACCCAATTCCGATTTCCGTTCAATTATTTTACGGCTGTAATCATGATCGATGCTATTAAGGGTGCGATCGGCGATGCCGTTCTCACTTCCATGTGGATTTTCTGCGCTTCGTCTCTTGGAGTTCTTACCTCTGTCCTGTACTCGGTTGCTGGTGTTTATGGCATTCCGCTTCACCCGCTTTTTATCACTACTGCTCTCGTCTTCGTTCTTGTTTTCGTTTTTAATATAATTGGCGCTGCTTTGGGTGGGGCTAGCTTTAATCCCACTGCTACTGCCGCTTTCTATGCTGCTGGCGTTGGTCCGACCTCTCTCCTCTCCATGGCTCTCCGTTTCCCTGCTCAGGCAGCTGGTGCGGTTGCTGGTGCTGTGGCGATCAAGGAGGTGATGCCAATACAATACAAGCACATGCTTGGTGGACCTACTCTAAAAGTTGACATTCATTCTGGAGCCACAGCTGAAGGAGTTTTGACATTTCTAATCAGTTTTGCTGTTCTTCTAATTGTACTCAGAGGCCCCTCCAGTCCAGTTATTCAAACATGGTTGATGGCAGTGGCTACCGTAGCGTTAATCGTTGCTGGTTCCGATTACACAGGACCTTCCATGAATCCTGCAAATGCGTTTGGATGGGCATATCTAAACAACACGCACGATACATGGGAGCAGTTGTACGTGTACTGGATCGCCCCGTTCATAGGAGCCATTTTGGCTGCTTGGCTTTTCAGAATCATCTTCCCACCACCAGCCCCAGCCCCAGCCAAGCAGAAGAAAGCTTGA | 780 | 48.72 | MLTQFRFPFNYFTAVIMIDAIKGAIGDAVLTSMWIFCASSLGVLTSVLYSVAGVYGIPLHPLFITTALVFVLVFVFNIIGAALGGASFNPTATAAFYAAGVGPTSLLSMALRFPAQAAGAVAGAVAIKEVMPIQYKHMLGGPTLKVDIHSGATAEGVLTFLISFAVLLIVLRGPSSPVIQTWLMAVATVALIVAGSDYTGPSMNPANAFGWAYLNNTHDTWEQLYVYWIAPFIGAILAAWLFRIIFPPPAPAPAKQKKA | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3918355 | 3922097 | + | CmoCh03G002630.1 | Cmo03g00263 | 377726 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00263 | 259 | Pfam | Major intrinsic protein | 20 | 242 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g00263 | 259 | Gene3D | Glycerol uptake facilitator protein. | 15 | 254 | IPR023271 | - | |
Cmo03g00263 | 259 | PANTHER | AQUAPORIN SIP1-1 | 19 | 258 | IPR044222 | GO:0015250 | |
Cmo03g00263 | 259 | PANTHER | AQUAPORIN SIP1-1 | 19 | 258 | - | - | |
Cmo03g00263 | 259 | PRINTS | Major intrinsic protein family signature | 22 | 41 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g00263 | 259 | PRINTS | Major intrinsic protein family signature | 69 | 93 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g00263 | 259 | PRINTS | Major intrinsic protein family signature | 108 | 127 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g00263 | 259 | PRINTS | Major intrinsic protein family signature | 154 | 172 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g00263 | 259 | PRINTS | Major intrinsic protein family signature | 185 | 207 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g00263 | 259 | PRINTS | Major intrinsic protein family signature | 225 | 245 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g00263 | 259 | SUPERFAMILY | Aquaporin-like | 16 | 255 | IPR023271 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo03g00263 | Cmo06g00036 | CCT | |
Cmo03g00263 | Cmo07g01221 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00263 | Cmo-Chr3:3918355 | Cmo06g00036 | Cmo-Chr6:241017 | 1.44E-30 | dispersed | |
Cmo03g00263 | Cmo-Chr3:3918355 | Cmo07g01221 | Cmo-Chr7:6647349 | 1.93E-140 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00263 | K09875 | - | csv:101220534 | 410.994 |