Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00264 ATGCTCGGAGACGGAATTATCCACTTAGTTATGCTCGGAGACAGAATTATCCACTCAGGTATGCTTAGAGACGGAATTATCCATCCAGCTATGCTCGGAGATGGAATTATCCACTCAGGTATGCTCAGAGACGGAATTATCCATTCAGTTATGCTTGGAGATGGAATTATCCACTTAGCGAATTCGCTAACTGCTCCATTTCTGAATCCAAATCCGCCATTGTTGACACTCCCTTCAATCCTTACTTCAAATCCCTTCTTCTTCTTCCCTTTTCCCCTGACTTCGCCATTTCAATTTCTTCTCTTCCGCCGATTTTTTTGTTTGTTTTTGGTTCTTCTTCAATCCAAATTTCACTTCAATTCGGCTCCCAATCGACCCCATTTCCTCGATTTTACTGACGGATTCGACCCAGATCCAATCGGAGAGCTGGATCCGACTCCCGAAGCACCGCAGTCCTTGAAGGCTCCCGCTGCCTCCAATTCCACTGGAAACGGTCAGATCCGTTACCGATCTCCGTCTTCCGCCGAGCTTCTTGACGGCCAATCGGCGTCTCTTCCACTTCAAGATCAACAGAAACTACTTCAGTTGGAGTTTGACAAGATGCATAAACGTCCTGGGAAGCAACAATCGGAATCGTTGTCCAACAAGATCTATAGATTCAGAGGGGTGTTATTGCTCACCTCTCTTTCTCTTTTCCTTATCTTCTTTATTCTCTATTTCATGCCGGCTCGTGAGGATTACTCCTTCAACCACCGCAAAGTTTCCCCTGATCACAGGTCGTCTTCTTCTTCTAAGACCTCTTTTGCTGTAATTTTTGATGCTGGTAGCTCTGGGAGTCGCGTCCATGTCTTTTGCTTCGATCATAATCTCGATCTCCTCCCTGTTGGCAAGGACATCGAACTTTTCGAACAACTTAAACCAGGATTGAGTGCATATGCTGACAACCCCAAGAATGCTGCAGCATCTCTAATTTCCCTATTGGAAAAGGCAGAAAATGTTGTTCCAAAAAGGCTGCGGCAAATGACCCCTGTTAGAGTTGGGGCAACTGCAGGCTTGAGGGCCCTGAAAGGTGATACATCTGATAGAATTTTGCAGGCGGTTAGGGATCTCCTGCGAGACAAAAGTGACCTCAGGTTGGAGGGAAATGCTGTGTCTGTAATTGATGGAACTCAAGAAGGTTCTTACCTTTGGGTGACGTTAAACTATCTGCTTGGGAACTTGGGTAAGAAATATTCGGATACAGTTGGAGTTGTAGATCTTGGGGGAGGATCTGTTCAAATGGCATACGCTATCTCAGAAAAGGATGCTTCTCGGCTATCAACTGCAGAGGGCGTATACATCAAAAAGATGTATCTGAAGGGAGCAACTTATTATCTCTATGTTCACAGTTATTTGCATTATGGGTTACTCGCTGCTCGAGCAGAGGTTTTGAGTGTCTCAGAAGATTCTAGCAATGATTGCATCCTATCTGGCTACGAAGGAGCGTACCATTACGGGGGAAAGGACTACAAAGCATCGGCCTCTTCATCAGGCTCCAGCTTGAATGGATGCAGGAGGACAGTTTTGAAGGCCCTCAAGGTTAATGAATCCTCATGTACTCACATGAAGTGCACTTTTGGTGGCGTTTGGAATGGCGGAGGAGGAGACGGGCAGAAGAATCTCTTCGTTGCTTCGTTTTTCTTCGACAGGGCGGCTGAGGCTGGTTTTGCTGACCCCAATAAGCCCGTCGCTGAAGTTCGCCCTTCAGACTTCAACGATGCAGCAAAGCAAGCCTGCCAAATCAAAGTCGAAGACACCAGTACATATCCGAATGTCGAGAAGGATAACCTGCCGTACTTGTGTTTGGATCTTGTGTATCAGTACACACTACTCGTAGACGGATTCGGCTTGGATCCCTGGCAAGAGATCACATTGGTGAAGAAGGTTAAATACCAGAATTCCTTAGTTGAAGCAGCATGGCCTCTAGGCAGTGCCATCGAAGCTGTCTCGTCGTTAGCCTAA 2001 46.43 MLGDGIIHLVMLGDRIIHSGMLRDGIIHPAMLGDGIIHSGMLRDGIIHSVMLGDGIIHLANSLTAPFLNPNPPLLTLPSILTSNPFFFFPFPLTSPFQFLLFRRFFCLFLVLLQSKFHFNSAPNRPHFLDFTDGFDPDPIGELDPTPEAPQSLKAPAASNSTGNGQIRYRSPSSAELLDGQSASLPLQDQQKLLQLEFDKMHKRPGKQQSESLSNKIYRFRGVLLLTSLSLFLIFFILYFMPAREDYSFNHRKVSPDHRSSSSSKTSFAVIFDAGSSGSRVHVFCFDHNLDLLPVGKDIELFEQLKPGLSAYADNPKNAAASLISLLEKAENVVPKRLRQMTPVRVGATAGLRALKGDTSDRILQAVRDLLRDKSDLRLEGNAVSVIDGTQEGSYLWVTLNYLLGNLGKKYSDTVGVVDLGGGSVQMAYAISEKDASRLSTAEGVYIKKMYLKGATYYLYVHSYLHYGLLAARAEVLSVSEDSSNDCILSGYEGAYHYGGKDYKASASSSGSSLNGCRRTVLKALKVNESSCTHMKCTFGGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPNKPVAEVRPSDFNDAAKQACQIKVEDTSTYPNVEKDNLPYLCLDLVYQYTLLVDGFGLDPWQEITLVKKVKYQNSLVEAAWPLGSAIEAVSSLA 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3926741 3933732 + CmoCh03G002640.1 Cmo03g00264 377727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00264 666 CDD NBD_sugar-kinase_HSP70_actin 270 450 - -
Cmo03g00264 666 Gene3D - 268 659 - -
Cmo03g00264 666 PANTHER APYRASE-LIKE PROTEIN 202 664 - -
Cmo03g00264 666 Pfam GDA1/CD39 (nucleoside phosphatase) family 263 664 IPR000407 GO:0016787
Cmo03g00264 666 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 387 402 IPR000407 GO:0016787
Cmo03g00264 666 MobiDBLite consensus disorder prediction 139 166 - -
Cmo03g00264 666 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 202 664 IPR000407 GO:0016787
Cmo03g00264 666 Gene3D Exopolyphosphatase. Domain 2 388 643 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00264 Cmo-Chr3:3926741 Cmo09g01060 Cmo-Chr9:5758340 1.09E-176 dispersed
Cmo05g00866 Cmo-Chr5:5657289 Cmo03g00264 Cmo-Chr3:3926741 1.28E-39 transposed
Cmo03g00264 Cmo-Chr3:3926741 Cmo07g01222 Cmo-Chr7:6653630 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00264 K14641 - csv:101220305 833.943