Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00303 | ATGACATCTGATCAGCCCCTGCTGGCTTCATCAGAATCCCCATCTCAAAATCGTGGTTCCTTTGGTTGTCTATGTCGCAGTGCTTCTTTTACCTCTTCCAGTTACGACGATTCTCAGAATGACATTGTGGATGTGAAGGAAACCTGCTTTCCTTTTGCATACCCCACCCAGGATAGAAGACGCCTGGTCAAGTGGGGTGCAATGGAGCTACATAATATTAATGATAACCCTGCAAGCTTTGAACTCTCCAGGGTCCAGGAGAAGTTACATAAGGCACAAAGAAGTCGTCATAAAAGTATACAGTTTGAGGATAATTTACAGCATGACGATAATCCAAGGTTGATATACATCAATGATCCAAGGAGAACTAATGATAAGTATGAGTTCACAGGAAATGAGATAACCACCAGCAAGTATACATTGATTACCTTCTTGCCGAAGAATCTCTTTATTCAGTTCCATAGGGTTGCCTATCTTTATTTTCTTGCTATTGCAGCTCTTAACCAGCTTCCACCTTTGGCAGTCTTTGGGAGAACGGTATCTCTTTTCCCCCTCCTGTTTGTGCTATGTGTTACAGCTATTAAAGATGGCTACGAGGATTGGCGTAGACATAGATCTGATCGTAATGAGAACAATAGACAGGCTCTCGTGCTTCAATCCGATGAATTCCAATTGAAAGTGTGGAAAAAAATACGAGCAGGTGAAGTTGTGAAGATCTGTGCAGACGAGGTCATTCCTTGTGACATGGTTTTATTGGGGACAAGTGATCCTAGTGGTCTTGCTTACATACAAACAATGAATTTGGACGGTGAATCAAACTTGAAGACAAGGTATGCTAGGCAGGAAACAGCATTTGCAGTAGCCGAGGGGTGTTCATATTCTGGTCTTATTCGATGTGAACAACCTAATAGGAACATTTATGAGTTCACTGCCAATATGGAGTTCAACAACCATAAATTTCCCCTCAGCCAGTCAAACATAGTCTTGCGTGGTTGTCAGCTGAAGAACACTGAATGGATTATTGGGGTGGTTGTCTATGCCGGACAAGAGACAAAAGCCATGTTAAACAGTGCAATGTCTCCTGCCAAGCGAAGTAAACTGGAGGGTTACATGAACAGGGAAACATTGTGGTTGTCAATCTTCCTCTTTGTCATGTGTCTAGTTGTGGCCCTTGGAATGGGGTTATGGCTTGTTCGGCACAAGGAACAGCTTGATACCTTGCCATATTATAGGAAAAGGTATTTCACAAATGGGGCCGACGATGGTAAGAAGTACAGGTTTTATGGAATACCTATGGAAACCTTTTTCTCCTTTTTGAGTTCTATTATAGTGTTCCAGATTATGATACCGATATCCCTTTATATTACAATGGAGATGGTGAGACTGGGGCAGTCATATTTCATGATTGAAGATAAGCACATGTACTGCAGAATCTCTTGCTCAAGGTTTCAGTGCAGATCATTGAATATCAATGAGGATCTTGGTCAAGTTCGCTACATTTTTTCTGATAAAACAGGAACACTTACTGAAAATAAGATGGAATTTAAAAGAGCAAGTGTGTACGGGAAGAATTACGGGAACAACTTGACTGAGGGTTATTCATCAATGTATTCCATTCCAGCAACTATAGGGGGGAGGAGGAGGAAACTTAAATCTGAAGTTGCTGTTGATACTGAACTTCTCAAATTATTGCACAAGGACCTAAATGGAGATGAAAAGATTGCTGCACATGAATTTTTTCTTACATTGGCTGCATGCAATACTGTAATTCCTATTCTCATGGATGACAAATCTAGTTATGAAAATGGTGAATTGCACGAGGATGTCGAAACTATTGGTTATCAGGGGGAATCCCCTGACGAGCAGGCACTAGTTGCTGCAGCCGCTGCTTATGGATATACCCTTTTCGAGCGCACATCTGGGCATATTGTTATAGATGTCAATGGTGAGAACTTAAGGTTGGATGTTTTGGGTTTACATGAGTTTGATAGCATTCGCAAAAGAATGTCTGTTGTCATCAGATTCCCTGACAATACTATAAAGGTGCTGGTAAAAGGTGCCGATACTTCGATGTTGAGTATTTTAGGCAATGACTCTGATAGGGAAGAATTTATCAAGCATGCTACTCGACGCCATTTGAGTGAATATTCAATGGAAGGTTTGCGAACACTTGTAGTTGCTGCCAGAGACCTGAAAGATTCTGAATTTGAGCTGTGGCAGAGCAGATATGAGGATGCTAGCACTTCACTGACTGATAGAGCAGTAAAACTACGTCAGACAGCAGCCCTTATAGAATGTGATCTAAAGCTTTTGGGTGCAACTGCTATTGAGGACAAGCTTCAAGACGGTGTACCTGAAGCCATTGAATCTCTTCGACAGGCTGGAATAAAGGTCTGGATTCTGACGGGAGATAAGCAGGAGACAGCCATATCAATCGGTCTCTCCTGCAAATTGCTGACTCCCGATATGCAGTCAATTATTGTCAATGGAAATTCCGAGTATGATTGCAGGAAACTTTTAGCTGATGCTATAGAAAAATATGGTATTAAATCAACACAGGGCAGAAGTCAAACACAGAAGATGAATTGTGAGAATGAACGCCATGATACACCAAAGATATCCGGTATGTCAGATTTTAATGAAGAGAAAGAAGAAGTGACCGATAAACCACTAGCTCTAATAATTGATGGAAACAGTTTGGTGTACATTTTGGAAAAGGAATTGGAGTCAGAGCTTTTTGAACTTGCAACTTCATGCAACGTTGTGCTATGCTGTCGTGTCGCTCCTTTGCAGAAAGCTGGAATTGTTGATCTGATTAAGAGTAGAACTGATGATATGACATTGGCAATTGGCGATGGGGCCAATGATGTCTCAATGATTCAGATGGCCGACGTAGGCGTTGGTATATGTGGACAGGAAGGGCGTCAAGCGGTAATGGCATCTGATTTTGCCATGGGACAATTTCGCTTTTTAAAAAGATTACTTCTAGTGCATGGACATTGGAACTATCAACGTGTAGGCTACATGGTTCTATACAACTTCTACCGCAATGCTGTTTTCGTCTTGATGCTCTTCTGGTACATTCTATGCACAGCATTCTCAACAACTTCAGCTTTGACTGATTGGAGTAGTGTGTTTTACTCTGTTATTTATACGTCTATCCCCACTATTTTTGTTGGTATTCTGGACAAAGACTTGAGTCACAAAACCCTACTCCAATATCCTAAGCTCTATGGTGCTGGCCATAGACAGGAGGCATACAATTTGCGTCTCTTTTGGTTCACAATGATTGATACCCTTTGGCAGAGTCTTGTTCTCTTCTATGTGCCATTGTTCATTTACAAGGAGAGTTCCATTGATATATGGAGCTTGGGAAGTTTGTGGACCATAGCTGTTGTTATCCTTGTGAACGTACACTTAGCGATGGATGTTCAACGTTGGGTATATATTACACATGCTGCAGTCTGGGGATCCATAGTCATAACGTACGCATGCATGGTGGTGTTGGATTCGATACCCGTTTTTCCTAATTACTGGACGATCTTTCATCTGGCTAAGTCCCCAACATATTGGTTGTCTATATTGCTCATAATAGTTGTTGCATTGCTTCCACGCTATCTTTTTAAAGTTGTGCACCAAAGATTCTGGCCCTCGGATATTCAGATAGCCAGAGAAGCCGAGGTACTGAGAAAACGAAAAGGTCGTGAACAGTTTAGTTCAAAGCAAGGTCGAGATTCCAATTAA | 3744 | 41.53 | MTSDQPLLASSESPSQNRGSFGCLCRSASFTSSSYDDSQNDIVDVKETCFPFAYPTQDRRRLVKWGAMELHNINDNPASFELSRVQEKLHKAQRSRHKSIQFEDNLQHDDNPRLIYINDPRRTNDKYEFTGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRQALVLQSDEFQLKVWKKIRAGEVVKICADEVIPCDMVLLGTSDPSGLAYIQTMNLDGESNLKTRYARQETAFAVAEGCSYSGLIRCEQPNRNIYEFTANMEFNNHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAMSPAKRSKLEGYMNRETLWLSIFLFVMCLVVALGMGLWLVRHKEQLDTLPYYRKRYFTNGADDGKKYRFYGIPMETFFSFLSSIIVFQIMIPISLYITMEMVRLGQSYFMIEDKHMYCRISCSRFQCRSLNINEDLGQVRYIFSDKTGTLTENKMEFKRASVYGKNYGNNLTEGYSSMYSIPATIGGRRRKLKSEVAVDTELLKLLHKDLNGDEKIAAHEFFLTLAACNTVIPILMDDKSSYENGELHEDVETIGYQGESPDEQALVAAAAAYGYTLFERTSGHIVIDVNGENLRLDVLGLHEFDSIRKRMSVVIRFPDNTIKVLVKGADTSMLSILGNDSDREEFIKHATRRHLSEYSMEGLRTLVVAARDLKDSEFELWQSRYEDASTSLTDRAVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIGLSCKLLTPDMQSIIVNGNSEYDCRKLLADAIEKYGIKSTQGRSQTQKMNCENERHDTPKISGMSDFNEEKEEVTDKPLALIIDGNSLVYILEKELESELFELATSCNVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIFVGILDKDLSHKTLLQYPKLYGAGHRQEAYNLRLFWFTMIDTLWQSLVLFYVPLFIYKESSIDIWSLGSLWTIAVVILVNVHLAMDVQRWVYITHAAVWGSIVITYACMVVLDSIPVFPNYWTIFHLAKSPTYWLSILLIIVVALLPRYLFKVVHQRFWPSDIQIAREAEVLRKRKGREQFSSKQGRDSN | 1247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4214054 | 4219417 | + | CmoCh03G003030.1 | Cmo03g00303 | 377766 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00303 | 1247 | Pfam | haloacid dehalogenase-like hydrolase | 498 | 812 | - | - | |
Cmo03g00303 | 1247 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 978 | 1218 | IPR032630 | - | |
Cmo03g00303 | 1247 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 507 | 784 | IPR023299 | GO:0000166 | |
Cmo03g00303 | 1247 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 503 | 509 | IPR018303 | - | |
Cmo03g00303 | 1247 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 434 | 529 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo03g00303 | 1247 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 920 | 1036 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo03g00303 | 1247 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 104 | 1242 | - | - | |
Cmo03g00303 | 1247 | Pfam | E1-E2 ATPase | 212 | 459 | - | - | |
Cmo03g00303 | 1247 | Gene3D | - | 191 | 358 | - | - | |
Cmo03g00303 | 1247 | SUPERFAMILY | Calcium ATPase, transduction domain A | 212 | 354 | IPR008250 | - | |
Cmo03g00303 | 1247 | SFLD | Haloacid Dehalogenase | 485 | 1001 | - | - | |
Cmo03g00303 | 1247 | Gene3D | - | 498 | 510 | IPR023214 | - | |
Cmo03g00303 | 1247 | CDD | P-type_ATPase_APLT_Dnf-like | 131 | 1110 | - | - | |
Cmo03g00303 | 1247 | Gene3D | - | 511 | 528 | IPR023299 | GO:0000166 | |
Cmo03g00303 | 1247 | Gene3D | - | 768 | 990 | IPR023214 | - | |
Cmo03g00303 | 1247 | Gene3D | - | 613 | 751 | IPR023299 | GO:0000166 | |
Cmo03g00303 | 1247 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 104 | 1242 | - | - | |
Cmo03g00303 | 1247 | SUPERFAMILY | HAD-like | 496 | 996 | IPR036412 | - | |
Cmo03g00303 | 1247 | SFLD | p-type atpase | 485 | 1001 | IPR044492 | - | |
Cmo03g00303 | 1247 | Pfam | haloacid dehalogenase-like hydrolase | 846 | 967 | - | - | |
Cmo03g00303 | 1247 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 129 | 1217 | IPR023298 | - | |
Cmo03g00303 | 1247 | MobiDBLite | consensus disorder prediction | 861 | 876 | - | - | |
Cmo03g00303 | 1247 | Pfam | Phospholipid-translocating ATPase N-terminal | 115 | 180 | IPR032631 | - | |
Cmo03g00303 | 1247 | MobiDBLite | consensus disorder prediction | 855 | 876 | - | - | |
Cmo03g00303 | 1247 | Gene3D | - | 481 | 497 | - | - | |
Cmo03g00303 | 1247 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 129 | 1225 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo03g00303 | Cmo07g01262 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00303 | Cmo-Chr3:4214054 | Cmo15g00548 | Cmo-Chr15:2610755 | 0 | dispersed | |
Cmo18g01081 | Cmo-Chr18:11365450 | Cmo03g00303 | Cmo-Chr3:4214054 | 0 | dispersed | |
Cmo03g00303 | Cmo-Chr3:4214054 | Cmo07g01262 | Cmo-Chr7:6898040 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00303 | K14802 | - | csv:101206692 | 2251.86 |