Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00330 | ATGGGAGCCTGCTGCACAAAAGATCACATCCATGGAGGAGGCTACATGACCTATGATAGAGATGAGAGGGATTCCAATGCCGGCGACGACGGAGAAGAGGTCCGACGCGGTGACGACGGCGAGACTGTTAGACTCCGTGGATCCTCTGCCTTCACATCAATGTTCACTCAACGAGGAAGAAAAGGAGTCAATCAAGATTCAATGACGATTTGGGAGGATTTCTCAGGGGAGAAAGATTTGGTGTTTTGTGGAGTTTTTGATGGTCATGGTCCTTCTGGTCATAGGGTTGCTCGTTATGCACGAGATGTGCTACCCACGAAGCTCTCTAAAGCAATCAAAAAACACCCATCGAAACCCGAAGATGGATTGGTTTCTATTTGGGAAGCTGCTTTTGAAGAATCTTTCAAAGAATTTGATCAAGAACTCGGCTATGATTCTTCTATTGATTGTTTCTGTAGTGGAGCAACAGCCGTGACCATTATCAAACAGGGAGAGCATTTGGTGGTGGCTAACTTGGGTGACTCCCGGGCGGTTCTCTGCACCAGAGGAGATAAACATCAACATATTCCCATCCAATTAACAGTCGATCACAAACCAAATATTCCATGCGAGGCAGAAAGAATACACAACAGCCATGGCAGAATCACAGCAGAAAAAGAAGACCCAGATATACACAGAGTATGGGTACCAGATGCAGATTACCCAGGCCTGGCCATGTCAAGATCCTTAGGCGATTTTTGCCTAAAAGATTATGGCGTTATCTCAAACCCTCAAATCTCCTACAGAAATCTCACAAGAAAAGACGAGTTCATCGTTCTAGCAACAGATGGGGTATGGGATGTGTTGACGAACAAGCAAGTAATCAACATAGTTGCATCAGCAAAGAACCGATCCACGGCAGCGAAATTGGTAGTGAAACTAGCAGTTCGAGAATGGAAACGGCGATTTCCAGGGTCGATGATCGACGATTGTGCAGTGATTTGCGTGTTCTTCAAGAACCCACCAATGTTGATGAAATCAATGACGAGCGTGGGGCGGCGGAACGTGAGAAGCCACCCAGAATTTGCAGTTTCAAGAAGCTGTAAATCAATGGGGAATGATAGAACAAGAGAAGAAGCAGGTGGGTCTGTGAACAGAGATTCTTCCAAGGAAGAGCAGGGAATTTGCAGAAGCAATTCACTGACGAGAGGTCCGCCATTTTCGAGGGCTTTGAGCCATAATCTGAAAATGGGTAAGTCTTGTCGTGAAGTTGAAGCATGTTGA | 1263 | 45.92 | MGACCTKDHIHGGGYMTYDRDERDSNAGDDGEEVRRGDDGETVRLRGSSAFTSMFTQRGRKGVNQDSMTIWEDFSGEKDLVFCGVFDGHGPSGHRVARYARDVLPTKLSKAIKKHPSKPEDGLVSIWEAAFEESFKEFDQELGYDSSIDCFCSGATAVTIIKQGEHLVVANLGDSRAVLCTRGDKHQHIPIQLTVDHKPNIPCEAERIHNSHGRITAEKEDPDIHRVWVPDADYPGLAMSRSLGDFCLKDYGVISNPQISYRNLTRKDEFIVLATDGVWDVLTNKQVINIVASAKNRSTAAKLVVKLAVREWKRRFPGSMIDDCAVICVFFKNPPMLMKSMTSVGRRNVRSHPEFAVSRSCKSMGNDRTREEAGGSVNRDSSKEEQGICRSNSLTRGPPFSRALSHNLKMGKSCREVEAC | 420 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4439194 | 4441754 | + | CmoCh03G003300.1 | Cmo03g00330 | 377793 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00330 | 420 | MobiDBLite | consensus disorder prediction | 15 | 38 | - | - | |
Cmo03g00330 | 420 | ProSiteProfiles | PPM-type phosphatase domain profile. | 51 | 331 | IPR001932 | - | |
Cmo03g00330 | 420 | Gene3D | - | 41 | 333 | IPR036457 | - | |
Cmo03g00330 | 420 | PANTHER | PROTEIN PHOSPHATASE 2C 65-RELATED | 1 | 378 | - | - | |
Cmo03g00330 | 420 | SUPERFAMILY | PP2C-like | 49 | 334 | IPR036457 | - | |
Cmo03g00330 | 420 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 378 | - | - | |
Cmo03g00330 | 420 | SMART | PP2C_4 | 41 | 329 | IPR001932 | - | |
Cmo03g00330 | 420 | MobiDBLite | consensus disorder prediction | 364 | 386 | - | - | |
Cmo03g00330 | 420 | CDD | PP2Cc | 53 | 331 | IPR001932 | - | |
Cmo03g00330 | 420 | Pfam | Protein phosphatase 2C | 71 | 309 | IPR001932 | - | |
Cmo03g00330 | 420 | MobiDBLite | consensus disorder prediction | 360 | 402 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo03g00330 | Cmo07g01285 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00330 | Cmo-Chr3:4439194 | Cmo05g00859 | Cmo-Chr5:5570993 | 2.31E-108 | dispersed | |
Cmo14g01709 | Cmo-Chr14:13411004 | Cmo03g00330 | Cmo-Chr3:4439194 | 3.20E-30 | dispersed | |
Cmo17g00274 | Cmo-Chr17:1648265 | Cmo03g00330 | Cmo-Chr3:4439194 | 3.26E-30 | dispersed | |
Cmo03g00330 | Cmo-Chr3:4439194 | Cmo07g01285 | Cmo-Chr7:7102504 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00330 | - | - | csv:101209063 | 662.529 |