Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00334 ATGGAAGACGAATCGTTGCAGAAGGTTGCGATTTCAGGGCCAATCTTAGCCTCTTTGATCCAACGCTGCTCCTCCTCCTCCTCCGGCGCCGTTGATGGTCTTCTCTTCGGCCATGTCTCCGAAACTACGCCCTTATCCCTCTCCGATGATCCATCTTCTTCATCCAACATCGAACCATCGGTACGTGTCGCCACTGTCACCGGATTTCTCTGCTCTGGTACCACGAATAGTTTTTACGATTCTTCTGGACAAGTAGATTCACAATTGCTTAACCGCCTTCTCGGCCGAAACCTGTCCGACGGCCAAGCTCAACCTAACGATTCTTTGGTCGGTTGGTTTGCCGGCCGCCGGAGAACTCAGCTTCGACCTTCCATGCGTGAATACTTAGTGAGTGCCTCTCTGTCTTCGATGAAGCAATTGTCGTTTCCTGTCAAAGACTCTGTGAAACCTACCAATCTAATCCCTAGTTTGTTTCTGCTTCTGACTTCGCCGATATCTGATCAAATTATCCACACACACGAGTACCGTGCTTTTCAATTTCGGTCCTCCAATGAGTTCTTTGAGCCGAAATCAATTGACATTGTGAACATCGGACCGGCATTTCGTGGCCACTATGGGTCGTTTACCCCTAATTCTCCTTTCCCTCATTTGCCTTGCGAGATGAGAGCTTCTCCGATGAATGTAGATAAGATTGATGGGAATTTGAATCTGATGAAGCAAAACTTGAAAGATCAGAAGCAACTGAATATGTGTGCTGAAGGATTCGAGATTGGGAACTTGACCCGGTTACTGGGTTCTGAGGCAGCAAATTATACTGCTGGGCTGGAGGATTTATACGAAAAAATGCTTGCCAAGACTGAGAGCTTGGCACGGCTCGTTGAGAAGAGCTCTGCTCAGGTTCTTGATCAGGAAAATCACAACAGAAAGTTGAGATATAAACTTGCGAGGTACCCTGGATTTGAGAACTGCAAGAACATCGACCTTGTAACGAAATTACGAACTTTTGGCATCAAAACCCGAATGCTGCATGCCGTTGACATTAAAATGGCGACTTTCTGA 1059 46.84 MEDESLQKVAISGPILASLIQRCSSSSSGAVDGLLFGHVSETTPLSLSDDPSSSSNIEPSVRVATVTGFLCSGTTNSFYDSSGQVDSQLLNRLLGRNLSDGQAQPNDSLVGWFAGRRRTQLRPSMREYLVSASLSSMKQLSFPVKDSVKPTNLIPSLFLLLTSPISDQIIHTHEYRAFQFRSSNEFFEPKSIDIVNIGPAFRGHYGSFTPNSPFPHLPCEMRASPMNVDKIDGNLNLMKQNLKDQKQLNMCAEGFEIGNLTRLLGSEAANYTAGLEDLYEKMLAKTESLARLVEKSSAQVLDQENHNRKLRYKLARYPGFENCKNIDLVTKLRTFGIKTRMLHAVDIKMATF 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4458588 4461111 + CmoCh03G003340.1 Cmo03g00334 377797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00334 352 PANTHER ABRAXAS FAMILY MEMBER 1 315 IPR023238 -
Cmo03g00334 352 PANTHER OS07G0540200 PROTEIN 1 315 - -
Cmo03g00334 352 PRINTS Protein family FAM175 signature 111 127 IPR023238 -
Cmo03g00334 352 PRINTS Protein family FAM175 signature 191 205 IPR023238 -
Cmo03g00334 352 PRINTS Protein family FAM175 signature 11 29 IPR023238 -
Cmo03g00334 352 PRINTS Protein family FAM175 signature 77 96 IPR023238 -
Cmo03g00334 352 PRINTS Plant protein family FAM175 signature 199 219 IPR023241 -
Cmo03g00334 352 PRINTS Plant protein family FAM175 signature 276 302 IPR023241 -
Cmo03g00334 352 PRINTS Plant protein family FAM175 signature 1 22 IPR023241 -
Cmo03g00334 352 PRINTS Plant protein family FAM175 signature 47 71 IPR023241 -
Cmo03g00334 352 PRINTS Plant protein family FAM175 signature 162 182 IPR023241 -
Cmo03g00334 352 PRINTS Plant protein family FAM175 signature 227 247 IPR023241 -
Cmo03g00334 352 PRINTS Plant protein family FAM175 signature 253 273 IPR023241 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00334 Cmo06g00205 CCT
Cmo03g00334 Cmo14g00037 CCT
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00334 K20799 - csv:101208097 532.717