Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00359 ATGGAGAATTGTGATCGCCGTGCTTTTCTTCATCGGCGGACGAATCGGATCGGCGTCAATGCGGAGGCAGAGGCGGCGGCGGCGGATAGGTTTCCGGCGTGGAGCGTACCGGAGACGAAGGAACTGCTTGCGATAAGAGAGGCGCTGGATAGAAGGTTCTCGGAAATGAAACAGAATAGGATGCTTTGGATTTCGGTGGCCGGCAAGATGAAGGCGAAAGGCTTTAATCGGAACGACGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACGCGCTATAAGGGGTGTGAAACTATGGATCCTAAAGCTTTCAAGCAACAATTTCCATTTTACGACGATCTCCACGCCATTTTCACCGCAAGGATGCAAAAGAATTGGTGGATCGAACCCGAAAACCGAGCGAAAGACTCGAAAAGGAAAGCCACGATTGAGCGGTTGTCTAGCGAGGACCCGAAAAGGGGAAAAAGGAGGAGAGAAGAAGATGAGAGAAGCAATTTGAAGGAAATAATGAAGGGGTTTGTGGAAAGAGAGAAGGAAATGGAGAGGCAATGGAGAGAAGCGTTTAGGGTTAGAGAGGAAGAGAGAAGGTTGAAGGAGAAGGAATGGAGGATGAAAATGGAAGGTCTAGAGAGAGAGAAGATGATGACGTGGATAATGTGGAGAGAGAAAGATGCTGAGAGGAGAGAGAGAGAGGAAGCAAGGGCTTTGAACACTCATGCTTTCATCTCTGCCTTGTTAAGGAGCTTCACATAA 753 48.74 MENCDRRAFLHRRTNRIGVNAEAEAAAADRFPAWSVPETKELLAIREALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKAFKQQFPFYDDLHAIFTARMQKNWWIEPENRAKDSKRKATIERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDAERREREEARALNTHAFISALLRSFT 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4567499 4569538 - CmoCh03G003590.1 Cmo03g00359 377822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00359 250 PANTHER - 161 249 - -
Cmo03g00359 250 PANTHER - 9 162 - -
Cmo03g00359 250 Gene3D - 34 95 - -
Cmo03g00359 250 Pfam Myb/SANT-like DNA-binding domain 33 117 IPR044822 -
Cmo03g00359 250 ProSiteProfiles Myb-like domain profile. 34 90 IPR001005 -
Cmo03g00359 250 PANTHER - 9 162 - -
Cmo03g00359 250 PANTHER - 161 249 - -
Cmo03g00359 250 MobiDBLite consensus disorder prediction 138 163 - -
Cmo03g00359 250 CDD GT1 34 97 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00359 Cmo14g00054 CCT
Cmo03g00359 Cmo06g00219 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00359 Cmo-Chr3:4567499 Cmo04g00623 Cmo-Chr4:3097281 5.81E-28 dispersed
Cmo14g00054 Cmo-Chr14:270457 Cmo03g00359 Cmo-Chr3:4567499 2.96E-52 wgd
Cmo03g00359 Cmo-Chr3:4567499 Cmo06g00219 Cmo-Chr6:1181729 3.29E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9375 PF13837 Myb_DNA-bind_4 4.60E-18 CL0123 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00359 - - csv:101218250 311.227