Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00375 ATGCGTTCATCCAATAATCCAACGGATACAAAACCACGCAACAGATTATGTGGCTCTTGCCGATCACAAGCCCCCTCTCTCAGCCACATAACAACCCAACCAGAATCCCAAATCCCATCTCACACTCTTCAATTCCCCTCTCAACTCATCGTCGCAATGGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACACGCCTCGTCGACGTGCGGCCGAGTTCCGCCCGAGTCCAAGCCCGATTCGGATTCGGTAAGAAAAAAGCTCCAGCAAAGAAATCGCCGTCATCGAAGACGATATCCGACCGTCCGCTGTGGTTTCCGGGAGCCAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGCGACTACGGATTCGATCCGTTCGGGCTGGGGAAACCAGCAGAGTATTTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATAATCGGGACGAGATTTGAGAGCGCCGACGTGAAATCGACGCCGTTTCAGCCGTACTCGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTGATCCATGGAAGATGGGCGATGTTGGCCACACTCGGCGCTCTCGCCGTTGAAGGCCTCACTGTAATATAA 639 55.09 MRSSNNPTDTKPRNRLCGSCRSQAPSLSHITTQPESQIPSHTLQFPSQLIVAMATATAAATSSFIGTRLVDVRPSSARVQARFGFGKKKAPAKKSPSSKTISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESADVKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGALAVEGLTVI 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4670633 4671352 - CmoCh03G003750.1 Cmo03g00375 377838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00375 212 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 53 210 IPR001344 GO:0009765|GO:0016020
Cmo03g00375 212 SUPERFAMILY Chlorophyll a-b binding protein 98 211 - -
Cmo03g00375 212 Pfam Chlorophyll A-B binding protein 113 209 IPR022796 -
Cmo03g00375 212 Gene3D Chlorophyll a/b binding protein domain 104 212 - -
Cmo03g00375 212 MobiDBLite consensus disorder prediction 1 39 - -
Cmo03g00375 212 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.1, CHLOROPLASTIC 53 210 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00375 Cmo-Chr3:4670633 Cmo11g00756 Cmo-Chr11:3676214 1.03E-14 dispersed
Cmo03g00375 Cmo-Chr3:4670633 Cmo07g01093 Cmo-Chr7:5721158 2.91E-100 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00375 K08915 - csv:101208740 275.018