Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00384 ATGGACTTAAATGCCTCGCCGGTGCCTGAAGAGGATGAAGAGACGTTTGATAGACATGAAGTGGTGTATAGTGCTCCAGAGGATCATATAGAGACTGGTGCCAGTATTGCACGGCGGGAACGAGAAGAAAGAAAAAGGCGGTTGAAAAGAGATCGCTCTATTGAGAGACCGGTGCATGAATACCAACAGCCGGCACGGGATCAGTCTTACCCTGCTAAAAACCAAAAAACTGTTAGAAGCAGGCTTCCTCCAGGTTGGTTGGATTGCCCTGCTTTTGGTCAAGAAATATGTTGCATGATTCCTTCCAAAGTTCCTCTGGGCGACACCTTCAGTGATTGTGTAGCACCTGGTAAAAGATATGCATTTAAGCAAGCGATCCATCAGCAGCAGAGAGTTTGGGGGAGAAAACTCGGTTTGGTGATTGATTTGACAAATTCTTATCGTTATTATACAACGACAGATTTGAATAAAGAGGGTATCAAGTATGTTAAGATTCCTTGCAAGGGGAGGGATTCTGTACCTGACAACAAATCGGTCAATATGTTCGTTTACGAGGTCAGTCAGTTTATTTCTCGTCAGAAACACTCAAAGAAGTATATTCTTGTCCATTGCACGCATGGCCATAATCGCACTGGATATATGATCATAAATTATCTTGCGCGTGCACTATCCATTTCTGTTACCCAGGCTCTTAAAATGTTTTCCGATGCACGTCCTCCTGGAATTTACAAGCCAGATTACATTGATGCATTATATGCCTTCTATCATGAAAAAAAACCTGAATTGGTTGTTTGCCCACCCACACCTGAGTGGAAGAGATCCTCAGATCTTGATCTTAATGGTGAAGCAGTTCCGGATGATGACGATGATGGAGGTTCTGCTGCTCCTTTGAATGAAAATCATGATGATGCTGCTCAAGTGATGACAAATGATGATATATTGGGTGATGAGATACCTGAGGACCAAGAACGTGCTTTTAAACACTTCTGCTATCAAATGCTTAAAATGAATGCAGGAGCAAGAGCGAATTTGCAATTTCCCGGGTCGCATCCTGTGTCTCTTAACAGAGAGAATCTTCAACTGCTAAGGCAACGCTATTATTATGCCACGTGGAAAGCTGATGGAACAAGATATATGATGCTAATAACCATGGATGGATGCTACTTGATTGACAGGGGTTTTAAATTTAGAAGAGTCCAAATGAGATTTCCGTACAGAAATGCAAATGATGGCCTAGTTGAGAAGATTCACAACTACACACTCCTTGATGGAGAAATGATCATTGACACTCTGCCGGACTCACAGAAGCAAGAGAGAAGATATCTTATATATGATATGATGGCAATTAATCATGTTTCAGTCACTGAGCGTCCTTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATCGAACCTCGTAATTACGAGCGCCAGAATATTTACCAAAGTAGGAACCCTCAGTATAGATATGACCTAGAGCCATTCAGGGTGAGGAGGAAAGACTTTTGGTTGCTCTCCACAGTTACCAAACTTTTGAAGGAGTTCATACCGAGGCTTTCACATGATGCCGATGGTCTAATATTTCAGGGGTGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTAAAGTGGAAATATCCGGAAATGAATTCAGTCGACTTCCTTTTTGAGATGGGGGACGATGATTCTCAGACGCTTATTTTGTTCGAACGAGGAAAGAGGAAAACAATGGAAGGAAATAGGGTTAAGTTCAAAGATGGCGACCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGCTCTTGGGATTCTGATGAACGAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACATATAGAAAGGTTATGCGGAGCATTAAAGACAACATCACGGAGGAGGATTTGTTGAAGGAAATTCATGAGATCATACGCTTGCCTATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCCCAACATACGAATTCAACACGACGGAGGAGTTCCTACAGGATGTTGTTTGCCATAGCTTTGCCTTGTTGCTATCGTCGTGTGTGCAGCTGGCGTGTCTATGATCATCCAGTCATTGCACTTTATAGATGTTTTCAGTTAGAGCTTTGA 2154 42.29 MDLNASPVPEEDEETFDRHEVVYSAPEDHIETGASIARREREERKRRLKRDRSIERPVHEYQQPARDQSYPAKNQKTVRSRLPPGWLDCPAFGQEICCMIPSKVPLGDTFSDCVAPGKRYAFKQAIHQQQRVWGRKLGLVIDLTNSYRYYTTTDLNKEGIKYVKIPCKGRDSVPDNKSVNMFVYEVSQFISRQKHSKKYILVHCTHGHNRTGYMIINYLARALSISVTQALKMFSDARPPGIYKPDYIDALYAFYHEKKPELVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPLNENHDDAAQVMTNDDILGDEIPEDQERAFKHFCYQMLKMNAGARANLQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRGFKFRRVQMRFPYRNANDGLVEKIHNYTLLDGEMIIDTLPDSQKQERRYLIYDMMAINHVSVTERPFYERWKMLEKEVIEPRNYERQNIYQSRNPQYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEMGDDDSQTLILFERGKRKTMEGNRVKFKDGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRRSSYRMLFAIALPCCYRRVCSWRVYDHPVIALYRCFQLEL 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4741476 4751787 - CmoCh03G003840.1 Cmo03g00384 377847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00384 717 MobiDBLite consensus disorder prediction 275 302 - -
Cmo03g00384 717 Pfam mRNA capping enzyme, catalytic domain 350 548 IPR001339 GO:0004484|GO:0005524|GO:0006370
Cmo03g00384 717 ProSiteProfiles Dual specificity protein phosphatase domain profile. 109 261 IPR020422 GO:0006470|GO:0008138
Cmo03g00384 717 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 1 678 - -
Cmo03g00384 717 MobiDBLite consensus disorder prediction 11 62 - -
Cmo03g00384 717 Gene3D DNA ligase/mRNA capping enzyme 303 546 - -
Cmo03g00384 717 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 180 249 IPR000387 GO:0016311|GO:0016791
Cmo03g00384 717 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 310 549 - -
Cmo03g00384 717 CDD Adenylation_mRNA_capping 343 549 IPR001339 GO:0004484|GO:0005524|GO:0006370
Cmo03g00384 717 Gene3D - 547 655 IPR012340 -
Cmo03g00384 717 Pfam mRNA capping enzyme, C-terminal domain 552 646 IPR013846 -
Cmo03g00384 717 MobiDBLite consensus disorder prediction 1 75 - -
Cmo03g00384 717 PIRSF mRNA_capping_HCE 69 680 IPR017074 GO:0004484|GO:0006370|GO:0140818
Cmo03g00384 717 Gene3D Protein tyrosine phosphatase superfamily 78 291 IPR029021 -
Cmo03g00384 717 SUPERFAMILY Nucleic acid-binding proteins 551 663 IPR012340 -
Cmo03g00384 717 ProSiteProfiles ATP-dependent DNA ligase family profile. 432 577 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Cmo03g00384 717 CDD RNA_5'-triphosphatase 85 252 - -
Cmo03g00384 717 Pfam Dual specificity phosphatase, catalytic domain 135 255 IPR000340 GO:0008138|GO:0016311
Cmo03g00384 717 PANTHER MRNA-CAPPING ENZYME 1 678 - -
Cmo03g00384 717 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 82 272 IPR029021 -
Cmo03g00384 717 ProSitePatterns Tyrosine specific protein phosphatases active site. 202 212 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00384 Cmo-Chr3:4741476 Cmo07g01089 Cmo-Chr7:5664956 1.09E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00384 K13917 - csv:101209960 1255.74