Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00384 | ATGGACTTAAATGCCTCGCCGGTGCCTGAAGAGGATGAAGAGACGTTTGATAGACATGAAGTGGTGTATAGTGCTCCAGAGGATCATATAGAGACTGGTGCCAGTATTGCACGGCGGGAACGAGAAGAAAGAAAAAGGCGGTTGAAAAGAGATCGCTCTATTGAGAGACCGGTGCATGAATACCAACAGCCGGCACGGGATCAGTCTTACCCTGCTAAAAACCAAAAAACTGTTAGAAGCAGGCTTCCTCCAGGTTGGTTGGATTGCCCTGCTTTTGGTCAAGAAATATGTTGCATGATTCCTTCCAAAGTTCCTCTGGGCGACACCTTCAGTGATTGTGTAGCACCTGGTAAAAGATATGCATTTAAGCAAGCGATCCATCAGCAGCAGAGAGTTTGGGGGAGAAAACTCGGTTTGGTGATTGATTTGACAAATTCTTATCGTTATTATACAACGACAGATTTGAATAAAGAGGGTATCAAGTATGTTAAGATTCCTTGCAAGGGGAGGGATTCTGTACCTGACAACAAATCGGTCAATATGTTCGTTTACGAGGTCAGTCAGTTTATTTCTCGTCAGAAACACTCAAAGAAGTATATTCTTGTCCATTGCACGCATGGCCATAATCGCACTGGATATATGATCATAAATTATCTTGCGCGTGCACTATCCATTTCTGTTACCCAGGCTCTTAAAATGTTTTCCGATGCACGTCCTCCTGGAATTTACAAGCCAGATTACATTGATGCATTATATGCCTTCTATCATGAAAAAAAACCTGAATTGGTTGTTTGCCCACCCACACCTGAGTGGAAGAGATCCTCAGATCTTGATCTTAATGGTGAAGCAGTTCCGGATGATGACGATGATGGAGGTTCTGCTGCTCCTTTGAATGAAAATCATGATGATGCTGCTCAAGTGATGACAAATGATGATATATTGGGTGATGAGATACCTGAGGACCAAGAACGTGCTTTTAAACACTTCTGCTATCAAATGCTTAAAATGAATGCAGGAGCAAGAGCGAATTTGCAATTTCCCGGGTCGCATCCTGTGTCTCTTAACAGAGAGAATCTTCAACTGCTAAGGCAACGCTATTATTATGCCACGTGGAAAGCTGATGGAACAAGATATATGATGCTAATAACCATGGATGGATGCTACTTGATTGACAGGGGTTTTAAATTTAGAAGAGTCCAAATGAGATTTCCGTACAGAAATGCAAATGATGGCCTAGTTGAGAAGATTCACAACTACACACTCCTTGATGGAGAAATGATCATTGACACTCTGCCGGACTCACAGAAGCAAGAGAGAAGATATCTTATATATGATATGATGGCAATTAATCATGTTTCAGTCACTGAGCGTCCTTTCTATGAACGGTGGAAGATGCTTGAGAAAGAAGTGATCGAACCTCGTAATTACGAGCGCCAGAATATTTACCAAAGTAGGAACCCTCAGTATAGATATGACCTAGAGCCATTCAGGGTGAGGAGGAAAGACTTTTGGTTGCTCTCCACAGTTACCAAACTTTTGAAGGAGTTCATACCGAGGCTTTCACATGATGCCGATGGTCTAATATTTCAGGGGTGGGATGATGCTTATGTTCCTCGAACTCATGAGGGTCTTTTAAAGTGGAAATATCCGGAAATGAATTCAGTCGACTTCCTTTTTGAGATGGGGGACGATGATTCTCAGACGCTTATTTTGTTCGAACGAGGAAAGAGGAAAACAATGGAAGGAAATAGGGTTAAGTTCAAAGATGGCGACCCCTCCTTCTATTCAGGAAAGATTGTTGAGTGCTCTTGGGATTCTGATGAACGAGTATGGGTCTGCATGCGTATCAGGACAGACAAAACAACTCCTAATGATTTCAATACATATAGAAAGGTTATGCGGAGCATTAAAGACAACATCACGGAGGAGGATTTGTTGAAGGAAATTCATGAGATCATACGCTTGCCTATGTATGCTGATAGGATAAGGAATGATAGTAAAGCAGCCCAACATACGAATTCAACACGACGGAGGAGTTCCTACAGGATGTTGTTTGCCATAGCTTTGCCTTGTTGCTATCGTCGTGTGTGCAGCTGGCGTGTCTATGATCATCCAGTCATTGCACTTTATAGATGTTTTCAGTTAGAGCTTTGA | 2154 | 42.29 | MDLNASPVPEEDEETFDRHEVVYSAPEDHIETGASIARREREERKRRLKRDRSIERPVHEYQQPARDQSYPAKNQKTVRSRLPPGWLDCPAFGQEICCMIPSKVPLGDTFSDCVAPGKRYAFKQAIHQQQRVWGRKLGLVIDLTNSYRYYTTTDLNKEGIKYVKIPCKGRDSVPDNKSVNMFVYEVSQFISRQKHSKKYILVHCTHGHNRTGYMIINYLARALSISVTQALKMFSDARPPGIYKPDYIDALYAFYHEKKPELVVCPPTPEWKRSSDLDLNGEAVPDDDDDGGSAAPLNENHDDAAQVMTNDDILGDEIPEDQERAFKHFCYQMLKMNAGARANLQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRGFKFRRVQMRFPYRNANDGLVEKIHNYTLLDGEMIIDTLPDSQKQERRYLIYDMMAINHVSVTERPFYERWKMLEKEVIEPRNYERQNIYQSRNPQYRYDLEPFRVRRKDFWLLSTVTKLLKEFIPRLSHDADGLIFQGWDDAYVPRTHEGLLKWKYPEMNSVDFLFEMGDDDSQTLILFERGKRKTMEGNRVKFKDGDPSFYSGKIVECSWDSDERVWVCMRIRTDKTTPNDFNTYRKVMRSIKDNITEEDLLKEIHEIIRLPMYADRIRNDSKAAQHTNSTRRRSSYRMLFAIALPCCYRRVCSWRVYDHPVIALYRCFQLEL | 717 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4741476 | 4751787 | - | CmoCh03G003840.1 | Cmo03g00384 | 377847 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00384 | 717 | MobiDBLite | consensus disorder prediction | 275 | 302 | - | - | |
Cmo03g00384 | 717 | Pfam | mRNA capping enzyme, catalytic domain | 350 | 548 | IPR001339 | GO:0004484|GO:0005524|GO:0006370 | |
Cmo03g00384 | 717 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 109 | 261 | IPR020422 | GO:0006470|GO:0008138 | |
Cmo03g00384 | 717 | PANTHER | MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED | 1 | 678 | - | - | |
Cmo03g00384 | 717 | MobiDBLite | consensus disorder prediction | 11 | 62 | - | - | |
Cmo03g00384 | 717 | Gene3D | DNA ligase/mRNA capping enzyme | 303 | 546 | - | - | |
Cmo03g00384 | 717 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 180 | 249 | IPR000387 | GO:0016311|GO:0016791 | |
Cmo03g00384 | 717 | SUPERFAMILY | DNA ligase/mRNA capping enzyme, catalytic domain | 310 | 549 | - | - | |
Cmo03g00384 | 717 | CDD | Adenylation_mRNA_capping | 343 | 549 | IPR001339 | GO:0004484|GO:0005524|GO:0006370 | |
Cmo03g00384 | 717 | Gene3D | - | 547 | 655 | IPR012340 | - | |
Cmo03g00384 | 717 | Pfam | mRNA capping enzyme, C-terminal domain | 552 | 646 | IPR013846 | - | |
Cmo03g00384 | 717 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Cmo03g00384 | 717 | PIRSF | mRNA_capping_HCE | 69 | 680 | IPR017074 | GO:0004484|GO:0006370|GO:0140818 | |
Cmo03g00384 | 717 | Gene3D | Protein tyrosine phosphatase superfamily | 78 | 291 | IPR029021 | - | |
Cmo03g00384 | 717 | SUPERFAMILY | Nucleic acid-binding proteins | 551 | 663 | IPR012340 | - | |
Cmo03g00384 | 717 | ProSiteProfiles | ATP-dependent DNA ligase family profile. | 432 | 577 | IPR012310 | GO:0003910|GO:0005524|GO:0006281|GO:0006310 | |
Cmo03g00384 | 717 | CDD | RNA_5'-triphosphatase | 85 | 252 | - | - | |
Cmo03g00384 | 717 | Pfam | Dual specificity phosphatase, catalytic domain | 135 | 255 | IPR000340 | GO:0008138|GO:0016311 | |
Cmo03g00384 | 717 | PANTHER | MRNA-CAPPING ENZYME | 1 | 678 | - | - | |
Cmo03g00384 | 717 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 82 | 272 | IPR029021 | - | |
Cmo03g00384 | 717 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 202 | 212 | IPR016130 | GO:0016311|GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00384 | Cmo-Chr3:4741476 | Cmo07g01089 | Cmo-Chr7:5664956 | 1.09E-111 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00384 | K13917 | - | csv:101209960 | 1255.74 |