Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00394 | ATGGCGGAAGAGTTGCAGGTCTTCGGTTTCTGGGCAAGCCCCTTCAGCCGCAGAGTGGAGCTTGCTCTGAAGCTCAAAGGCGTCGAATACCAACACATCGAGGAAGACTTACCCCACAACAAGAGCCATTTGCTCCTCCAATACAACCCAATTCACAAGAAGGTTCCTGTCCTCGTCCACCATGGAAAACCCATTTCTGAGTCTCTTGTGATCCTCGAATACATCGATGAAATCTGGAAAAACAACCCCCTGTTGCCCCAAAATCCGTACGAACGAGCTCTGGCTAGGTTTTGGGCTAAGTATATTGAGGACAAGGTTGTGGTTGCGATGCTGAAGGCTGCAAAAGCCAAAATTGAAGACAGGGAAAAGGGGTTGGAGGAAGCAGGGGAGGCGTTGGAACCGCTTGAGAAGGAGCTTGGAAGCAAGAGGTTCTTTGGGGGAGAGAAGATTGGGTTTGTGGATGTTGTTGGCACTGTGGTAGCTTACTGGGCTCCTGCCATTGATGAAGCTGTCGGGATTGAGATGATTGGAAGTGACAGGTTCCCGAATATAAAGAAATGGAGTGAAGAGGTTGTGAATCATGGCGTGGTGAAACAGATTCTGCCGCCAAAAGATAAGCTCGTGCCTTATTTGCGAACTGTTCTAAGCAGGAACTAG | 657 | 49.16 | MAEELQVFGFWASPFSRRVELALKLKGVEYQHIEEDLPHNKSHLLLQYNPIHKKVPVLVHHGKPISESLVILEYIDEIWKNNPLLPQNPYERALARFWAKYIEDKVVVAMLKAAKAKIEDREKGLEEAGEALEPLEKELGSKRFFGGEKIGFVDVVGTVVAYWAPAIDEAVGIEMIGSDRFPNIKKWSEEVVNHGVVKQILPPKDKLVPYLRTVLSRN | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4801084 | 4802143 | + | CmoCh03G003940.1 | Cmo03g00394 | 377857 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00394 | 218 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 3 | 213 | IPR045073 | - | |
Cmo03g00394 | 218 | Gene3D | Glutaredoxin | 1 | 84 | - | - | |
Cmo03g00394 | 218 | PANTHER | GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN | 3 | 213 | - | - | |
Cmo03g00394 | 218 | Coils | Coil | 108 | 131 | - | - | |
Cmo03g00394 | 218 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 210 | IPR010987 | - | |
Cmo03g00394 | 218 | SFLD | Main (cytGST) | 2 | 213 | - | - | |
Cmo03g00394 | 218 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 83 | IPR004045 | - | |
Cmo03g00394 | 218 | Gene3D | - | 85 | 217 | - | - | |
Cmo03g00394 | 218 | Pfam | Glutathione S-transferase, C-terminal domain | 104 | 193 | IPR004046 | - | |
Cmo03g00394 | 218 | CDD | GST_C_Tau | 89 | 212 | IPR045074 | GO:0004364|GO:0006749 | |
Cmo03g00394 | 218 | SUPERFAMILY | GST C-terminal domain-like | 77 | 215 | IPR036282 | - | |
Cmo03g00394 | 218 | CDD | GST_N_Tau | 5 | 79 | - | - | |
Cmo03g00394 | 218 | SFLD | Main.3: Omega- and Tau-like | 2 | 213 | IPR045073 | - | |
Cmo03g00394 | 218 | SUPERFAMILY | Thioredoxin-like | 5 | 106 | IPR036249 | - | |
Cmo03g00394 | 218 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 77 | IPR004045 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00394 | Cmo-Chr3:4801084 | Cmo07g01074 | Cmo-Chr7:5557747 | 1.50E-98 | dispersed | |
Cmo06g01161 | Cmo-Chr6:8901168 | Cmo03g00394 | Cmo-Chr3:4801084 | 1.42E-14 | dispersed | |
Cmo16g00499 | Cmo-Chr16:2411394 | Cmo03g00394 | Cmo-Chr3:4801084 | 2.01E-47 | dispersed | |
Cmo03g00394 | Cmo-Chr3:4801084 | Cmo03g00395 | Cmo-Chr3:4803152 | 7.53E-108 | tandem | |
Cmo03g00394 | Cmo-Chr3:4801084 | Cmo07g01072 | Cmo-Chr7:5533132 | 8.88E-78 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00394 | K00799 | - | csv:105435246 | 288.115 |