Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00426 ATGGCATCCTCTGTTTTGTTCATCACAATTTTCTCTGCTCTAATTTTCCTGTCCACCCAAACGCTGTCTCAGCACAACCAACTGTTCTATCCTGGATTCAATGCATCCACCAACTTGACTTTGAAGCAATATGCAGGAATCGAGAACAATGGAGTTTTGAGACTCACCAATTATGCCCCTGATATCATCGGCCAGGCCTTTTACGCCTCTCCAATTCAGTTCAAAAACTCCTCCACCGCCGCACACGGCGGTAGTAGCAACGGCAAAGCTTTTTCTTTCTCCACCTGTTTTGCCTTCTGCATCATCCCCGAGGACGATAACTATGTCGGCCATGGCTTCACTTTCGCTATTGTACCTTCTAAAAATCTCGGTGCTCTTTCACAGACGTATCTCGGCCTCTTCAACAGAAAACCCTCAACCCATATCTTCGCGGTTGAATTCGATACCATCCAGACGGTTGAGGTTAAAGACATCGACAACAATCATGTGGGTATCGATTTAAATAGCTTGATTTCCAATGTCTCTAAACAGGCTGCTTATTTTGATGATTCTGGTCAGCTTCATAATCTGACTCTCAAAAGTGGGAAGCCTGTTAAAGCTTGGATTGATTATGATTCTCGTGAAATCACTCTCAATGTTACGATTTCTCCTTTTTCTTCAAAACCCAGAAAGCCACTTCTGTCGTACAGAGTGGATCTTTCGTCAATTTTTAATGAAAATATGTACGTTGGATTTACTGCTTCAACGGGTATACTGGCTTATAGCTCGCAGTATATTTTGGGGTGGAGTTTCGCCATTAATGGCGAAGCCCGAGATCTTGAGCTCTCTTCGCTTCCATTACCCAAACAGAGGAAAACAGGGGCGAAAATCGGTCTCTCTGTTTATTTGTCTGTAACAGCGGCGAGTTTTTTTGCGATCTCTGTTTTCGCTTTTGGTATTTATTTCTTAAGAAAGCATAAGAAATCTAATGAAATCGAGCTGTGGGAGCTTCAAATGGGACCCCATCGATATTCCTACAGAGAACTCAAAAAGGGTACTAGAAATTTCAGCGAGAAGGAGATTCTTGGGTTTGGTGGATCTGGGAAAGTATACAGAGGAACCCTTCCGGTTTCGAAAACAGAAATCGCCGTGAAGCGAATTTTTCATAATTCGAAACAGGGTCTCCGGGAATTTGTGACGGAAATCGCTACAATCGGAAGGCTCCGTCACCGGAATCTGGTTCAGTTGCTCGGGTGGTGTCGGCGGGGGCAGGATCTGCTTATTGTTTACGAATTTATGGCGAATGGGAGCTTGGATAACTATCTATTCGACGATCCGAAAACAATTTTGAATTGGGAACAGAGATTCAAAATCATTAAAGGGGTTGCCTCTGCTCTGCTTTATCTTCACGAAGGGTACAAACAGGTGGTGATACACAGAGACGTGAAGGCGAGCAATGTGTTGTTAGACGGCGAATTGAACGGGAGATTGGGGGATTTCGGGCTTGCGAAGGTGTACGATCATGGGTCTGTTCCGGTTACGACTCGAGTCGTCGGAACTTTGGGTTATTTGGCACCGGAGCTGCCAAGAACAGGGAAACCAACGACGAGCTCCGACGTATACGCGTTTGGGGCTCTGATGTTGGAGGTGGTTTGTGGGCGGCGGCCAGTGGAAGTGAAGGCGCTGCCGGAGGAGATGACGTTAGTGGATTGGGTTTGGGACAAATACAGAGAAGGGCAGCTTTTGGTCGTCGTCGATCCGAAGCTTCGGGGAGACTACGACGAGGTTGAGGCGGCATTGGTATTGAAATTGGGGGTTTTGTGTTCGAATAATGAGCCGAAGCAACGGCCGAGTATGAGGCAGATTGTGCAGTGTTTGGACGGAGAAATTGGCGTCGCCGACGAGTGGAAGGCGCCCGACGGGGGGAGCAACGGTGGGGCGGTGGGGGATTTTGTCGTGTCTTTTACGTCTTTATCCATTACCTGA 1965 46.92 MASSVLFITIFSALIFLSTQTLSQHNQLFYPGFNASTNLTLKQYAGIENNGVLRLTNYAPDIIGQAFYASPIQFKNSSTAAHGGSSNGKAFSFSTCFAFCIIPEDDNYVGHGFTFAIVPSKNLGALSQTYLGLFNRKPSTHIFAVEFDTIQTVEVKDIDNNHVGIDLNSLISNVSKQAAYFDDSGQLHNLTLKSGKPVKAWIDYDSREITLNVTISPFSSKPRKPLLSYRVDLSSIFNENMYVGFTASTGILAYSSQYILGWSFAINGEARDLELSSLPLPKQRKTGAKIGLSVYLSVTAASFFAISVFAFGIYFLRKHKKSNEIELWELQMGPHRYSYRELKKGTRNFSEKEILGFGGSGKVYRGTLPVSKTEIAVKRIFHNSKQGLREFVTEIATIGRLRHRNLVQLLGWCRRGQDLLIVYEFMANGSLDNYLFDDPKTILNWEQRFKIIKGVASALLYLHEGYKQVVIHRDVKASNVLLDGELNGRLGDFGLAKVYDHGSVPVTTRVVGTLGYLAPELPRTGKPTTSSDVYAFGALMLEVVCGRRPVEVKALPEEMTLVDWVWDKYREGQLLVVVDPKLRGDYDEVEAALVLKLGVLCSNNEPKQRPSMRQIVQCLDGEIGVADEWKAPDGGSNGGAVGDFVVSFTSLSIT 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4932837 4934801 - CmoCh03G004260.1 Cmo03g00426 377889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00426 654 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 9 631 - -
Cmo03g00426 654 ProSiteProfiles Protein kinase domain profile. 349 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g00426 654 CDD STKc_IRAK 355 621 - -
Cmo03g00426 654 PANTHER - 9 631 - -
Cmo03g00426 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Cmo03g00426 654 CDD lectin_legume_LecRK_Arcelin_ConA 30 268 IPR001220 GO:0030246
Cmo03g00426 654 Pfam Legume lectin domain 27 278 IPR001220 GO:0030246
Cmo03g00426 654 SUPERFAMILY Protein kinase-like (PK-like) 323 619 IPR011009 -
Cmo03g00426 654 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Cmo03g00426 654 Pfam Protein kinase domain 349 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g00426 654 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 281 IPR013320 -
Cmo03g00426 654 Gene3D - 27 274 - -
Cmo03g00426 654 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Cmo03g00426 654 SMART serkin_6 349 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g00426 654 Gene3D Transferase(Phosphotransferase) domain 1 426 629 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00426 Cmo14g00123 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00426 Cmo-Chr3:4932837 Cmo14g00123 Cmo-Chr14:542648 0 dispersed
Cmo18g00348 Cmo-Chr18:2278900 Cmo03g00426 Cmo-Chr3:4932837 1.86E-162 dispersed
Cmo10g00099 Cmo-Chr10:425577 Cmo03g00426 Cmo-Chr3:4932837 1.09E-173 transposed
Cmo14g00121 Cmo-Chr14:539127 Cmo03g00426 Cmo-Chr3:4932837 0 wgd
Cmo03g00426 Cmo-Chr3:4932837 Cmo06g00285 Cmo-Chr6:1423945 0 wgd
Cmo03g00426 Cmo-Chr3:4932837 Cmo07g01051 Cmo-Chr7:5340491 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74175 PF00069 Pkinase 7.60E-44 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00426 - - bhj:120073983 1031.17