Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00449 ATGAGCGTGAACATAACCTCCATCAAAATCGCCTCCAATGGCGTCTGGCAAGGCGACAACCCCCTCCACTTCGCTTTCCCTCTCTTAATCCTTCAGTCCGTCCTCATTCTCCTCCTCTCCCGCCTCCTCGCCCTCCTCCTCAAACCTCTCCGGCAGCCCAAAGTCATCGCCGAAATCGTCGGTGGGATTCTTCTGGGTCCGTCGGCGCTCGGCCGAAACAAAGCTTATTTGCACCGGATTTTCCCTCAATGGAGCACTCCGATTCTCGAATCCGTTGCCAGCATCGGTTTATTGTTCTTCCTGTTCCTCGTTGGACTCGAACTCGATTTGTCCTCCATTCGTCGCAGCGGTCGGAGGGCTTTCGGAATCGCCCTCGCCGGAATCTCTGTCCCTTTCCTCTCCGGTATCGGAGTAGCCTTCATCCTCCGTAAAACCGTAGACGGCGTTGACAAAGTCGGCTATGGTCAATTCATTGTATTCATGGGTGTCGCCTTGTCCATCACTGCCTTCCCTGTTCTTGCTCGCATTTTAGCTGAGCTTAAGCTCCTCACTACCCAAGTCGGCGAAACCGCCATGGCTGCTGCTGCGTTTAACGACATCGCCGCTTGGATTCTCCTCGCACTTGCGGTGGCTCTCGCCGGTAACGGCGAAGGTGGGGCCCAAAAGAGTCCGTTGGTGTCAGTGTGGGTCCTACTTTCCGGAGGTGCGTATGTCGTTTTCATGATGGTGGTTATTCGTCCCGGAATGAAATGGGTTGTGCGGCGGTGTTCGTACGAGCACGATGCTCTGGGCGACGCGTATATCTGTTTGACGTTAGTGGGGGTGTTGGTGTCGGGATTCGTGACGGATTTGATCGGAATTCATTCGATTTTTGGGGGTTTTGTGTTTGGATTGGCGATTCCGAAAGGGGGAAGGTTTGCGGAGAGATTGATTGAGAGGATTGAAGATTTTGTGTCGGGTCTTCTTCTTCCTCTGTATTTTGCTTCCAGTGGGTTGAAGACGGATGTGGCTAAGATTAAAGGGGGCAGAGCGTGGGGGCTGCTGGCGTTAGTTATCTCCACTGCGTGCGCCGGTAAGATTCTGGCGACATTTGTGGCGGCGATGGCGTTTCTGATCCCGGCGAGAGAGGCGTTGGCGTTGGGGCTTCTTATGAACACTAAAGGCTTGGTTGAATTGATTGTTCTCAATATTGGCAAAGAGAAAAAGGTTTTGAACGACGAAATCTTCGCCATTTTAGTGTTAATGGCACTGTTCACAACATTCATCACTACCCCCACCGTGATGGCGGTTTACAAGCCAGCCCGCGGCGGCTCCACCCCACGAACCCACCGGAAACTCCACGACCTGTCGGGCGACGACGAGCTTCGGATCCTAGCCTGTCTCCACAGCTCTGGCAACGTGCCGTCCCTCATGGGTCTGACCGAAGCGACTCGCAGCACAAAAAACTCATCCCTCAAACTCTTCGTGATGCATCTGGTCGAGCTCACCGAGCGGTCTTCGTCCATCATGATGGTCCAACGCGCCCGCAAAAACGGCTTTCCTTTCTTTGCCAGGTTCCGGAAGGCCGGTGAGTGGCGCGACCAGATGGCTGCTGCCTTTCAGGCCTACAGCCAACTGGGTCGGGTTAAGGTCCGCCCCACTACGGCCGTCTCTTCCTTGGCCACTATGCATGAGGATATCTGCCACGTGGCGAACGAGAAGAGGGTCACGATGATCATCTTGCCATTCCATCGGAATTGGAGGGTGTTTGACGGCGACGGCAAGGAAGAGGAGGAGAATGTGGGCCATGGCTGGAGAGTTGTGAACCAACGGGTTCTGAAGAATGCGCCTTGCTCCGTGGCGGTTCTTGTGGACCGTGGATTTGGGGCCAATACGGTTCATACGCCTGGGCCTGGGCTCATGGTTGGTGTGGCCCAAAGGATTTGTATCGTGTTTTTTGGTGGGCCCGATGACCGGGAGGCGCTGGAGTTGGGTGGCCTGATGGCGGAGCATCCGGCGGTGAAGGTCACGGTGGTAAGGTTCCGGCCGTCGCCATCGAATGGGTTTGAGGGTAGCAACTTCATTTTACGCCCCATGCACTCCAAATCTGGCGACAACCGTTATAGCTTCTCCACAGATCCAATCAACCGGGAAAAAGAAAAGGAGTTAGATAATGTAGCACTGACGGAATTCAGAAGCAAATGGGATGCAACAGTTGAGTACACAGAGAAGGAGGCCAGCAACACGAACATGATAGTCGAAGGGGTGGTGGGCATTGGAAAGGAAGGTGGTTATGACCTAGTCGTGGTCGGGAAGGGTCGGGTTCCCTCCAGCATGGTGGTGAAACTAGCGGACCGACCAGCAGAGCACGCAGAGTTGGGGCCAGTAGGGGACATACTAGCCAGCTCGAGTAGGGGAATAGTATCATCAATACTAGTAATTCAACAACATGGAGGAGGTGGTCATGCAGAAGAAGCTCTGGTTTTGAAGATAGCAGAATCGAGTAAGAACGAACAGCCCTTGGCAATCGATGGGGCTTCAACTAATGTATAA 2532 54.03 MSVNITSIKIASNGVWQGDNPLHFAFPLLILQSVLILLLSRLLALLLKPLRQPKVIAEIVGGILLGPSALGRNKAYLHRIFPQWSTPILESVASIGLLFFLFLVGLELDLSSIRRSGRRAFGIALAGISVPFLSGIGVAFILRKTVDGVDKVGYGQFIVFMGVALSITAFPVLARILAELKLLTTQVGETAMAAAAFNDIAAWILLALAVALAGNGEGGAQKSPLVSVWVLLSGGAYVVFMMVVIRPGMKWVVRRCSYEHDALGDAYICLTLVGVLVSGFVTDLIGIHSIFGGFVFGLAIPKGGRFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIKGGRAWGLLALVISTACAGKILATFVAAMAFLIPAREALALGLLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFITTPTVMAVYKPARGGSTPRTHRKLHDLSGDDELRILACLHSSGNVPSLMGLTEATRSTKNSSLKLFVMHLVELTERSSSIMMVQRARKNGFPFFARFRKAGEWRDQMAAAFQAYSQLGRVKVRPTTAVSSLATMHEDICHVANEKRVTMIILPFHRNWRVFDGDGKEEEENVGHGWRVVNQRVLKNAPCSVAVLVDRGFGANTVHTPGPGLMVGVAQRICIVFFGGPDDREALELGGLMAEHPAVKVTVVRFRPSPSNGFEGSNFILRPMHSKSGDNRYSFSTDPINREKEKELDNVALTEFRSKWDATVEYTEKEASNTNMIVEGVVGIGKEGGYDLVVVGKGRVPSSMVVKLADRPAEHAELGPVGDILASSSRGIVSSILVIQQHGGGGHAEEALVLKIAESSKNEQPLAIDGASTNV 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5050317 5054161 + CmoCh03G004490.1 Cmo03g00449 377912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00449 843 Gene3D - 456 790 - -
Cmo03g00449 843 PANTHER BNAC06G14930D PROTEIN 3 824 - -
Cmo03g00449 843 PANTHER CATION/H + ANTIPORTER 3 824 - -
Cmo03g00449 843 Pfam Sodium/hydrogen exchanger family 35 427 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cmo03g00449 843 Gene3D - 28 436 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00449 Cmo-Chr3:5050317 Cmo16g00620 Cmo-Chr16:3029204 0 dispersed
Cmo03g00449 Cmo-Chr3:5050317 Cmo07g01023 Cmo-Chr7:5063025 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00449 - - csv:101207589 1365.13