Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo03g00455 | ATGAATCCCCAAGTTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATCCTGTCTAAAGCAGCTCTGAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTACCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCATTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAATTCCAATCTTTGCCAAGTTAATGATCCTCAGCTTGCTAGAGCCTGTGATTGATCAGAACTTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTCCCTGCCATCACCTTTGTAATGGCTTGGATCCTCAGGCTAGAGAAGGTTAAAATCAAAAGCATCAGAAGCCAAGCTAAATTGGTGGGAACAATAGCAACAGTAGGAGGAGCCATGATAATGACACTGATAAAAGGCCCAATTCTGGAGCTATTCTGGGTGAAACAGAGAGCAGATCATGCACAACAAAGGAGCGATATCAGCCTTCAACACACAATCAAAGGTTCAATTATGATCACAATTGGGTGCTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCAGCTGAGCTTTCTCTCACGGCTTGGATCTGCCTGCTGGGCACAGCGGAGGGCACTGTGTTGGCTTTGGTGATGGAAAGAGGAAACGCCGCCGTTTGGTCTATTGGTTGGGGAACCCAATTGCTCGCTGCCGTTTATAGTGGGATATTTTGTTCAGGGCTTGCTTATTACATTCAAGGATTAGTGATGAAAGACAAAGGTCCTGTGTTTGTCACTGCCTTTAGCCCATTGAGTATGGTCATCGTCGCTATCATGAGCTCCTTCATTTTGGGCGAACGTCTTTACTTTGGCAGGATACTTGGAGCTGGGGTGATAATTGTGGGACTATATCTTGTTGTTTGGGGGAAAAATAAAGATGGGAATTCCTCAAATGAAGACTTGAAATTGCCCATCAAACAAACAACAGAGATGCAAGAAAGTTCATCATCAGTTCAAGAACTTAATTCTGTTGATTCAAACAATGAGCAAAAATCATGA | 1116 | 43.55 | MNPQVSQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPIFAKLMILSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKLVGTIATVGGAMIMTLIKGPILELFWVKQRADHAQQRSDISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSIGWGTQLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRILGAGVIIVGLYLVVWGKNKDGNSSNEDLKLPIKQTTEMQESSSSVQELNSVDSNNEQKS | 371 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 5080508 | 5083867 | + | CmoCh03G004550.1 | Cmo03g00455 | 377918 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo03g00455 | 371 | PANTHER | WAT1-RELATED PROTEIN | 9 | 341 | - | - | |
| Cmo03g00455 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 235 | 331 | - | - | |
| Cmo03g00455 | 371 | Pfam | EamA-like transporter family | 187 | 326 | IPR000620 | GO:0016020|GO:0016021 | |
| Cmo03g00455 | 371 | Pfam | EamA-like transporter family | 23 | 135 | IPR000620 | GO:0016020|GO:0016021 | |
| Cmo03g00455 | 371 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 48 | 156 | - | - | |
| Cmo03g00455 | 371 | MobiDBLite | consensus disorder prediction | 347 | 371 | - | - | |
| Cmo03g00455 | 371 | PANTHER | WAT1-RELATED PROTEIN | 9 | 341 | IPR030184 | GO:0016021|GO:0022857 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo03g00455 | Cmo-Chr3:5080508 | Cmo07g01014 | Cmo-Chr7:5018602 | 0 | dispersed | |
| Cmo04g02463 | Cmo-Chr4:18212099 | Cmo03g00455 | Cmo-Chr3:5080508 | 1.20E-121 | dispersed | |
| Cmo08g01064 | Cmo-Chr8:6878846 | Cmo03g00455 | Cmo-Chr3:5080508 | 1.06E-56 | dispersed | |
| Cmo17g00167 | Cmo-Chr17:985407 | Cmo03g00455 | Cmo-Chr3:5080508 | 6.26E-44 | dispersed | |
| Cmo18g00829 | Cmo-Chr18:9683649 | Cmo03g00455 | Cmo-Chr3:5080508 | 3.88E-119 | dispersed | |
| Cmo15g00424 | Cmo-Chr15:1916632 | Cmo03g00455 | Cmo-Chr3:5080508 | 2.25E-132 | wgd | |
| Cmo03g00455 | Cmo-Chr3:5080508 | Cmo04g00227 | Cmo-Chr4:1137645 | 2.37E-144 | wgd | |
| Cmo03g00455 | Cmo-Chr3:5080508 | Cmo04g01270 | Cmo-Chr4:6434871 | 5.35E-122 | wgd | |
| Cmo03g00455 | Cmo-Chr3:5080508 | Cmo04g02746 | Cmo-Chr4:19879893 | 4.83E-140 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo03g00455 | - | - | csv:101217902 | 646.736 |