Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00455 ATGAATCCCCAAGTTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATCCTGTCTAAAGCAGCTCTGAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTACCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCATTGATTTTTGACAAGAAGGTCAGACCAAAGATGACAATTCCAATCTTTGCCAAGTTAATGATCCTCAGCTTGCTAGAGCCTGTGATTGATCAGAACTTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATTCTCCCTGCCATCACCTTTGTAATGGCTTGGATCCTCAGGCTAGAGAAGGTTAAAATCAAAAGCATCAGAAGCCAAGCTAAATTGGTGGGAACAATAGCAACAGTAGGAGGAGCCATGATAATGACACTGATAAAAGGCCCAATTCTGGAGCTATTCTGGGTGAAACAGAGAGCAGATCATGCACAACAAAGGAGCGATATCAGCCTTCAACACACAATCAAAGGTTCAATTATGATCACAATTGGGTGCTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCAGCTGAGCTTTCTCTCACGGCTTGGATCTGCCTGCTGGGCACAGCGGAGGGCACTGTGTTGGCTTTGGTGATGGAAAGAGGAAACGCCGCCGTTTGGTCTATTGGTTGGGGAACCCAATTGCTCGCTGCCGTTTATAGTGGGATATTTTGTTCAGGGCTTGCTTATTACATTCAAGGATTAGTGATGAAAGACAAAGGTCCTGTGTTTGTCACTGCCTTTAGCCCATTGAGTATGGTCATCGTCGCTATCATGAGCTCCTTCATTTTGGGCGAACGTCTTTACTTTGGCAGGATACTTGGAGCTGGGGTGATAATTGTGGGACTATATCTTGTTGTTTGGGGGAAAAATAAAGATGGGAATTCCTCAAATGAAGACTTGAAATTGCCCATCAAACAAACAACAGAGATGCAAGAAAGTTCATCATCAGTTCAAGAACTTAATTCTGTTGATTCAAACAATGAGCAAAAATCATGA 1116 43.55 MNPQVSQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPIFAKLMILSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVKIKSIRSQAKLVGTIATVGGAMIMTLIKGPILELFWVKQRADHAQQRSDISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSIGWGTQLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRILGAGVIIVGLYLVVWGKNKDGNSSNEDLKLPIKQTTEMQESSSSVQELNSVDSNNEQKS 371
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 5080508 5083867 + CmoCh03G004550.1 Cmo03g00455 377918
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00455 371 PANTHER WAT1-RELATED PROTEIN 9 341 - -
Cmo03g00455 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 331 - -
Cmo03g00455 371 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Cmo03g00455 371 Pfam EamA-like transporter family 23 135 IPR000620 GO:0016020|GO:0016021
Cmo03g00455 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Cmo03g00455 371 MobiDBLite consensus disorder prediction 347 371 - -
Cmo03g00455 371 PANTHER WAT1-RELATED PROTEIN 9 341 IPR030184 GO:0016021|GO:0022857
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00455 Cmo-Chr3:5080508 Cmo07g01014 Cmo-Chr7:5018602 0 dispersed
Cmo04g02463 Cmo-Chr4:18212099 Cmo03g00455 Cmo-Chr3:5080508 1.20E-121 dispersed
Cmo08g01064 Cmo-Chr8:6878846 Cmo03g00455 Cmo-Chr3:5080508 1.06E-56 dispersed
Cmo17g00167 Cmo-Chr17:985407 Cmo03g00455 Cmo-Chr3:5080508 6.26E-44 dispersed
Cmo18g00829 Cmo-Chr18:9683649 Cmo03g00455 Cmo-Chr3:5080508 3.88E-119 dispersed
Cmo15g00424 Cmo-Chr15:1916632 Cmo03g00455 Cmo-Chr3:5080508 2.25E-132 wgd
Cmo03g00455 Cmo-Chr3:5080508 Cmo04g00227 Cmo-Chr4:1137645 2.37E-144 wgd
Cmo03g00455 Cmo-Chr3:5080508 Cmo04g01270 Cmo-Chr4:6434871 5.35E-122 wgd
Cmo03g00455 Cmo-Chr3:5080508 Cmo04g02746 Cmo-Chr4:19879893 4.83E-140 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00455 - - csv:101217902 646.736