Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00550 ATGTTCGATCAAGATATGTTCCATGCACTACACCCTCACCATCATATGTTTGACATGGCGTTTAACACCTCCGAAAACGAGTTGGAAGATGTGAGAGATGATGATTTTGAGTCCAAATCAGGACCTGAAATCACCTTTGAGCCGCCTTGTGAGAGTGAGCATCAACAACGCGCCAAGAAGAGACGTTATAATCGCCATACACACCACCAAATCCAAGAAATGGAAGCATTCTTTAAGGAATGTCCGCACCCAGATGACAAGCAAAGAATGGACCTTAGCCGCGAGCTGGGGTTGGAGCCATTGCAAGTCAAGTTTTGGTTTCAGAACAAACGCACCCAAATGAAGGCTCAACAGGAAAGACATGAAAACGCCATTTTGAAAGCCGAGAATGAAAAGCTTCGAGCTGAGAATACTCGTTACAGAGAAGCATTCGCCCACTCCACCTGCTGCCCCAACTGTGGTTCCTCCGCCACTGCCCTCGGCGAGATGTCCTTCGACGACCAACATTTGCGCATTGAAAATTCTCGTTTGCGAGATGAGATGGAGCGAATGAGTGGATATGGCCTGAAATCCACCAAGTCTGTCCCTTCTTCGTACTATCACCTGCCGTCCAATGCTCCACAGTCGTCGGGTTTCGTGGGGGAAATGTATGGAGCGTGCGACTTTCTCCGCTCCATTTCCAGACCTTCAGAAGCCGACAAGCCAATCATTGTAGAACTGGCGGTTTCCGGCATGGAGGAATTGAGCCGAATGGCTCAGGCCGGAGAACCGTTGTGGGTTCCGGCTGATACCAAGTCAAGTGAAGTGGTTCTTAACGAAGCAGAGTATTTGAGCTGTTTTGGGGGCAGAGTTGGGCCCAAACCCTTGGGCTTTAGAACCGAAGCTTCTCGAGTTTCGGCTATTGTGTTCATGAACCATATTAAGCTCGTGGATATTTTAATGGACGCTACGCAATGGTCCACTGTGTTCTGCGGCATTGTTTCCCGGGCGTCCACCGTTGAAGTTCTTTCGCCTGGCCTACCCGGAAACTTCAACGGCGCCTTGTACCTGATGAGTGCTGAATTCCAAGTTCCATCGCCACTTGTTCCAACACGTGAAAACTACTTTGTAAGATACTGCAAACAGCAGGGGGATGGGGTATGGGCGGTGGCTGATGTTTCCTTGGACACCCTGCGGCCCTGTTCCATGCCAAGGACCCGAAGGAGACCTTCTGGTTGTTTGATTCAACAATTGCCCAATGGCTATTCAAAGATCACTTGGGTGGAACATGTTGAGGCGGACGAAACTGGTGTCCCGACAATGTACAGACCGCTCTTTAATTCAGGCCTCGCTTTTGGGGCTAAACGATGGGTTGCTACTTTAGATAGGCAATCTGAACGTTTTGCCACATCAATCGCCACCTCCATATCCACCGGCGATCTACGCGTCATATCGAGTATTGAAGGGAGGAAGAGTATGCTGAAGCTAGCCGAGAGAATGGTGACGAGCTTTTGCGCTGGCGTTGGCGCGTCGAGTGTACACGCGTGGACGGCGTTACCAATCGCCGCTGGTGATGATGTTCGAGTTGTAACGAGGAAGAGCACCGACGAACCAGGGCGACCACCTGGTGTTGTGCTGAGCGCCGCCACTTCTTTTTGGATCCCTGTTCCACCTAAGGTTGTGTTTGATTTCCTTCGGAAAGAGAAATCTCGAAGCGAGTGGGATATTCTGTCGAATGGGGGGTTAGTCCAGGAAATGGCGCACATAGCCAACGGCCGCCACTCCGGGAATTGTGTTTCCTTGCTCCGTGTCAATAGTGCAAATTCGAGCCAGAGCAATATGCTGATACTACAAGAAAGCTGCACCGACTGTACAGGATCCTACGTTATTTATGCTCCGGTGGACACAGTTGCAATGAACGTGGTGCTAAGCGGTTGCGATCCGGATTACGTGGCACTTTTACCGTCAGGATTCGCCATACTCCCTGACGGACCCGCCGGGGCCAACGGTGGGGAAATTCTGGAGCTGGGCTCCGTAGGTGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGTCGAGAAGTCAAGAACGCACCTTGAAAAGCACTTCCCCCTGCCCCGGCGGTGATTTAGAGACGAATGGTGAATGGTTTGTAGGGGTTTTGAGAAGCACCATGATCTCTTCACTTAGGCTCACATCTTCCAATCTCACTTCCTCTGAGTTTTTCAACAGAAAATCTCCAGTTCCATGGCCGAATCTTCCATTGCAATCCTCGGATTGCTGTGCTCTTAAGCATGTCGATCGATCTCTTTCTACCAACAAACCACTTCACATCTCATCCGTTGAGAATCTTTCTTTCCCCACAAAATCATCTCAGCGTTCGACGGTGTGCAAGGCGTATGAGGCTGAATCCCGACCTCTTCAGATTAACATTGAGCTTCCCGATGAACAGACGGCTCAGAAACTCAAAATTGGGCTCTATTTCGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTCTATAACAAGAAGGTTCTTAATGCCTTCCCTTATCCATGGCTCACCTCCACTCTCTCCCTTGCGGCTGGATCGCTCATGATGCTTATTTCTTGGGCCACTAGAATGGTCGACGCTCCCAAAACCGATTTCGATTTCTGGAAATCCCTACTGCCGGTTGCAGTGGCGCATTCGATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTCGCAGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCAGCTTTCAGTGTGTTGGTGTCCAGGTTTCTATTGGGCGAGATGTTTCCATTGCCAGTTTACTTATCTCTTATCCCAATCATTGGAGGCTGCGCTCTTTCCGCCGTTACTGAGCTCAACTTCAACATGACCGGTTTCTCGGGAGCGATGATATCGAACTTGGCATTTGTGTTTAGAAACATATTCTCAAAGAAAGGGATGAAGGGAAAGTCAGTGAGTGGGATGAATTACTACGCTTGCCTCTCATTGCTGTCTCTGCTAATTCTTACTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCTGACGGATTCCAAAGTGCTCTCTCCCAAATTGGTCCCAATTTCATTTGGTGGTTGGGAGCTCAAAGTATGTTCTACCACTTGTACAACCAAGTGTCGTACATGTCTCTAGATCAGATATCGCCACTGACATTCAGCGTGGGTAACACAATGAAAAGAATCTTCGTAATAGTGTCGTCGATTATCATCTTCCACACTCCTGTCCGACCCATCAACGCCATTGGAGCTGCCATCGCAATCCTCGGAACCTTCATCTACTCTCAGGAGATCGTTGTTGACGCCGATTTTGTAGCCACAGGGAGAGGAGATTGTGGTTGTGTTGGTTGA 3390 49.56 MFDQDMFHALHPHHHMFDMAFNTSENELEDVRDDDFESKSGPEITFEPPCESEHQQRAKKRRYNRHTHHQIQEMEAFFKECPHPDDKQRMDLSRELGLEPLQVKFWFQNKRTQMKAQQERHENAILKAENEKLRAENTRYREAFAHSTCCPNCGSSATALGEMSFDDQHLRIENSRLRDEMERMSGYGLKSTKSVPSSYYHLPSNAPQSSGFVGEMYGACDFLRSISRPSEADKPIIVELAVSGMEELSRMAQAGEPLWVPADTKSSEVVLNEAEYLSCFGGRVGPKPLGFRTEASRVSAIVFMNHIKLVDILMDATQWSTVFCGIVSRASTVEVLSPGLPGNFNGALYLMSAEFQVPSPLVPTRENYFVRYCKQQGDGVWAVADVSLDTLRPCSMPRTRRRPSGCLIQQLPNGYSKITWVEHVEADETGVPTMYRPLFNSGLAFGAKRWVATLDRQSERFATSIATSISTGDLRVISSIEGRKSMLKLAERMVTSFCAGVGASSVHAWTALPIAAGDDVRVVTRKSTDEPGRPPGVVLSAATSFWIPVPPKVVFDFLRKEKSRSEWDILSNGGLVQEMAHIANGRHSGNCVSLLRVNSANSSQSNMLILQESCTDCTGSYVIYAPVDTVAMNVVLSGCDPDYVALLPSGFAILPDGPAGANGGEILELGSVGEEEEEEEEEEEEEEESRSQERTLKSTSPCPGGDLETNGEWFVGVLRSTMISSLRLTSSNLTSSEFFNRKSPVPWPNLPLQSSDCCALKHVDRSLSTNKPLHISSVENLSFPTKSSQRSTVCKAYEAESRPLQINIELPDEQTAQKLKIGLYFATWWALNVVFNVYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRMVDAPKTDFDFWKSLLPVAVAHSIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSAVTELNFNMTGFSGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSLLSLLILTPFAIAVEGPKLWADGFQSALSQIGPNFIWWLGAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFHTPVRPINAIGAAIAILGTFIYSQEIVVDADFVATGRGDCGCVG 1129
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5496170 5504342 + CmoCh03G005500.1 Cmo03g00550 378013

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00550 1129 SUPERFAMILY Bet v1-like 482 658 - -
Cmo03g00550 1129 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 819 1109 IPR004696 GO:0016021|GO:0022857|GO:0055085
Cmo03g00550 1129 Gene3D - 48 133 - -
Cmo03g00550 1129 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 24 667 IPR042160 -
Cmo03g00550 1129 Coils Coil 109 143 - -
Cmo03g00550 1129 SMART START_1 239 460 IPR002913 GO:0008289
Cmo03g00550 1129 MobiDBLite consensus disorder prediction 671 689 - -
Cmo03g00550 1129 SUPERFAMILY Bet v1-like 232 461 - -
Cmo03g00550 1129 SUPERFAMILY Multidrug resistance efflux transporter EmrE 861 954 - -
Cmo03g00550 1129 SUPERFAMILY Homeodomain-like 47 118 IPR009057 -
Cmo03g00550 1129 CDD START_ArGLABRA2_like 234 459 - -
Cmo03g00550 1129 Coils Coil 672 695 - -
Cmo03g00550 1129 MobiDBLite consensus disorder prediction 671 708 - -
Cmo03g00550 1129 CDD homeodomain 60 118 IPR001356 GO:0003677
Cmo03g00550 1129 Pfam Triose-phosphate Transporter family 819 1108 IPR004853 -
Cmo03g00550 1129 Pfam START domain 241 460 IPR002913 GO:0008289
Cmo03g00550 1129 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 24 667 - -
Cmo03g00550 1129 SMART HOX_1 59 121 IPR001356 GO:0003677
Cmo03g00550 1129 MobiDBLite consensus disorder prediction 28 63 - -
Cmo03g00550 1129 Pfam Homeodomain 60 115 IPR001356 GO:0003677
Cmo03g00550 1129 ProSiteProfiles START domain profile. 230 463 IPR002913 GO:0008289
Cmo03g00550 1129 ProSiteProfiles 'Homeobox' domain profile. 57 117 IPR001356 GO:0003677
Cmo03g00550 1129 ProSitePatterns 'Homeobox' domain signature. 92 115 IPR017970 GO:0000981|GO:0006355
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00550 K09338 HD-ZIP; homeobox-leucine zipper protein - csv:101209093 1132.47
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cmo03g00550 Cmo07g00292 CST
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g01764 Cmo-Chr2:10084962 Cmo03g00550 Cmo-Chr3:5496170 1.38E-26 dispersed
Cmo03g00550 Cmo-Chr3:5496170 Cmo20g00616 Cmo-Chr20:3019339 0 dispersed
Cmo16g00906 Cmo-Chr16:5410802 Cmo03g00550 Cmo-Chr3:5496170 5.60E-169 dispersed
Cmo18g01131 Cmo-Chr18:11626770 Cmo03g00550 Cmo-Chr3:5496170 1.69E-65 dispersed
Cmo07g00292 Cmo-Chr7:1429581 Cmo03g00550 Cmo-Chr3:5496170 0 transposed
Cmo01g01194 Cmo-Chr1:9681913 Cmo03g00550 Cmo-Chr3:5496170 3.08E-173 wgd
Cmo11g01907 Cmo-Chr11:13249775 Cmo03g00550 Cmo-Chr3:5496170 0 wgd
Cmo13g00750 Cmo-Chr13:7339496 Cmo03g00550 Cmo-Chr3:5496170 0 wgd
Cmo19g00954 Cmo-Chr19:8710347 Cmo03g00550 Cmo-Chr3:5496170 0 wgd
Cmo02g00167 Cmo-Chr2:799348 Cmo03g00550 Cmo-Chr3:5496170 0 wgd
Cmo03g00550 Cmo-Chr3:5496170 Cmo07g00291 Cmo-Chr7:1422577 0 wgd
Cmo03g00550 Cmo-Chr3:5496170 Cmo09g00935 Cmo-Chr9:4905641 1.24E-172 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi10g29 . . . . . . . . . . . Cma07g00303 . Car07g00254 . . Cpe10g00791 . . . . . . . Cla01g02156 Cam01g2267 Cec04g1920 Cco04g1994 Clacu01g2286 Cmu01g2155 Cre04g1827 . . . . Lsi01g00413 Csa06g03531 . . . . . . . . . . . Cmo03g00550 Cmo07g00292 . . . . Cpe19g00971 . . . . . . . . . . . . . . . . . Chy02g00387 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmo03g01286 CST 1 463 Antiporters AT5G46110 70.1 3.8e-165 578.6
Cmo18g01131 . 52 416 Antiporters AT5G46110 74.8 1.9e-148 523.1
Cmo07g00219 CST 7 204 Antiporters AT5G46110 90.9 2.6e-97 353.2
Cmo09g00935 CCT,CST,ECH 1 396 Antiporters AT5G54800 74.3 1.7e-159 559.7
Cmo01g01194 CCT,CST,ECH 41 395 Antiporters AT5G54800 78.9 9.3e-158 553.9
Cmo16g00906 CCT,ECH 41 395 Antiporters AT5G54800 79.4 6.7e-156 547.7
Cmo07g00292 CST 5 390 Antiporters AT5G54800 72.8 2.0e-152 536.2
Cmo03g00550 CST 767 1109 Antiporters AT5G54800 78.2 6.0e-149 524.6
Cmo04g02826 . 63 393 Antiporters AT3G01550 64.8 5.4e-118 421.8
Cmo13g00914 CST 50 414 Antiporters AT3G01550 59.2 3.0e-113 406.0
Cmo18g00130 CST 112 476 Antiporters AT3G01550 58.2 1.1e-110 397.5
Cmo13g00914 CST 1 416 Antiporters AT5G33320 72.2 3.7e-157 552.0
Cmo18g00130 CST 60 478 Antiporters AT5G33320 72.2 7.0e-156 547.7
Cmo04g02826 . 66 394 Antiporters AT5G33320 61.8 9.0e-111 397.9
Cmo01g01194 CCT,CST,ECH 24 396 Antiporters AT1G61800 75.4 2.1e-160 562.8
Cmo07g00292 CST 34 387 Antiporters AT1G61800 79.7 6.1e-160 561.2
Cmo03g00550 CST 767 1109 Antiporters AT1G61800 80.8 1.8e-159 559.7
Cmo09g00935 CCT,CST,ECH 44 394 Antiporters AT1G61800 78.9 3.4e-158 555.4
Cmo16g00906 CCT,ECH 45 396 Antiporters AT1G61800 80.1 2.2e-157 552.7
Cmo06g01183 . 48 417 Antiporters AT5G17630 75.4 2.9e-149 525.8
Cmo09g00935 CCT,CST,ECH 66 393 Antiporters AT5G17630 54.1 2.8e-91 333.2
Cmo01g01194 CCT,CST,ECH 85 394 Antiporters AT5G17630 54.3 2.6e-89 326.6
Cmo07g00292 CST 90 388 Antiporters AT5G17630 54.3 2.6e-89 326.6
Cmo16g00906 CCT,ECH 89 394 Antiporters AT5G17630 55.0 3.4e-89 326.2
Cmo06g00700 . 9 378 Antiporters AT3G13320 79.5 1.2e-158 557.0
Cmo02g00312 . 28 423 Antiporters AT3G13320 73.7 3.8e-155 545.4
Cmo20g00692 . 69 446 Antiporters AT3G13320 76.1 3.8e-155 545.4
Cmo01g00025 . 145 515 Antiporters AT3G13320 75.3 7.8e-153 537.7
Cmo14g01257 . 114 476 Antiporters AT3G13320 71.5 1.6e-134 476.9
Cmo06g00695 . 9 206 Antiporters AT3G13320 78.8 3.6e-81 299.7
Cmo06g00691 . 344 486 Antiporters AT3G13320 75.3 1.7e-54 211.1
Cmo03g00362 CCT,CST,ECH 5 430 Antiporters AT2G38170 69.8 3.0e-158 555.8
Cmo07g01105 CCT,CST,ECH 5 434 Antiporters AT2G38170 68.0 2.4e-155 546.2
Cmo06g00224 CCT,CST,ECH 9 407 Antiporters AT2G38170 62.9 1.7e-137 486.9
Cmo01g00692 . 4 258 Antiporters AT2G38170 51.2 6.6e-65 245.7
Cmo03g00362 CCT,CST,ECH 1 398 Antiporters AT3G51860 70.8 6.8e-147 518.1
Cmo07g01105 CCT,CST,ECH 1 402 Antiporters AT3G51860 70.2 2.2e-145 513.1
Cmo06g00224 CCT,CST,ECH 21 394 Antiporters AT3G51860 67.3 1.1e-133 474.2
Cmo06g00700 . 9 349 Antiporters AT3G51860 51.9 2.2e-84 310.5
Cmo20g00692 . 61 413 Antiporters AT3G51860 51.0 3.1e-83 306.6
Cmo02g00312 . 36 390 Antiporters AT3G51860 50.4 3.4e-82 303.1
Cmo01g00692 . 3 256 Antiporters AT3G51860 54.6 6.7e-70 262.3
Cmo06g00695 . 9 205 Antiporters AT3G51860 51.2 1.0e-41 168.7
Cmo03g00362 CCT,CST,ECH 34 426 Antiporters AT5G01490 62.1 7.8e-132 468.0
Cmo07g01105 CCT,CST,ECH 37 436 Antiporters AT5G01490 60.9 3.0e-131 466.1
Cmo06g00224 CCT,CST,ECH 28 407 Antiporters AT5G01490 59.4 2.1e-121 433.3
Cmo06g00700 . 8 378 Antiporters AT1G55720 76.3 1.6e-148 523.5
Cmo20g00692 . 69 442 Antiporters AT1G55720 74.1 1.7e-147 520.0
Cmo02g00312 . 44 419 Antiporters AT1G55720 72.4 5.2e-144 508.4
Cmo01g00025 . 145 511 Antiporters AT1G55720 70.8 2.7e-140 496.1
Cmo14g01257 . 114 476 Antiporters AT1G55720 65.9 4.5e-124 442.2
Cmo06g00695 . 8 204 Antiporters AT1G55720 75.6 5.1e-75 279.3
Cmo06g00691 . 344 486 Antiporters AT1G55720 71.9 3.3e-50 196.8
Cmo06g00700 . 8 378 Antiporters AT1G55730 80.1 6.0e-161 564.7
Cmo20g00692 . 42 442 Antiporters AT1G55730 73.9 5.1e-160 561.6
Cmo02g00312 . 45 419 Antiporters AT1G55730 76.8 3.1e-157 552.4
Cmo01g00025 . 145 511 Antiporters AT1G55730 76.1 7.1e-154 541.2
Cmo14g01257 . 114 461 Antiporters AT1G55730 73.4 5.6e-135 478.4
Cmo07g01105 CCT,CST,ECH 68 435 Antiporters AT1G55730 51.2 8.0e-97 351.7
Cmo03g00362 CCT,CST,ECH 65 429 Antiporters AT1G55730 51.2 3.9e-96 349.4
Cmo06g00695 . 8 208 Antiporters AT1G55730 77.6 6.1e-81 298.9
Cmo06g00691 . 344 486 Antiporters AT1G55730 76.0 5.8e-55 212.6
Cmo10g01169 . 4 500 Antiporters AT5G27150 72.0 4.8e-213 738.0
Cmo11g01307 . 9 497 Antiporters AT5G27150 70.9 1.1e-206 716.8
Cmo17g01105 . 25 535 Antiporters AT5G27150 70.1 1.5e-201 699.9
Cmo08g01176 . 22 523 Antiporters AT5G27150 69.0 2.0e-195 679.5
Cmo01g01147 . 12 517 Antiporters AT5G27150 60.0 5.2e-167 585.1
Cmo08g01176 . 22 532 Antiporters AT3G06370 67.0 7.7e-190 661.0
Cmo17g01105 . 25 534 Antiporters AT3G06370 66.5 1.2e-187 653.7
Cmo10g01169 . 5 499 Antiporters AT3G06370 65.2 3.7e-184 642.1
Cmo11g01307 . 6 499 Antiporters AT3G06370 63.4 3.4e-182 635.6
Cmo01g01147 . 12 517 Antiporters AT3G06370 60.5 3.6e-163 572.4
Cmo01g01147 . 1 524 Antiporters AT5G55470 70.9 5.1e-215 744.6
Cmo17g01105 . 11 520 Antiporters AT5G55470 56.1 6.9e-156 548.1
Cmo11g01307 . 18 483 Antiporters AT5G55470 56.1 2.0e-155 546.6
Cmo08g01176 . 19 510 Antiporters AT5G55470 54.6 5.1e-151 531.9
Cmo10g01169 . 18 486 Antiporters AT5G55470 54.7 9.7e-150 527.7
Cmo10g01169 . 10 503 Antiporters AT3G05030 72.8 5.2e-215 744.6
Cmo11g01307 . 10 499 Antiporters AT3G05030 71.6 3.9e-210 728.4
Cmo17g01105 . 25 533 Antiporters AT3G05030 70.5 4.9e-205 711.4
Cmo08g01176 . 22 523 Antiporters AT3G05030 69.6 2.8e-200 695.7
Cmo01g01147 . 12 517 Antiporters AT3G05030 60.0 6.2e-168 588.2
Cmo14g01361 . 102 691 Antiporters AT1G15460 67.2 7.2e-223 770.8
Cmo05g00417 CST 99 656 Antiporters AT1G15460 66.6 1.2e-217 753.4
Cmo12g00272 CST 99 657 Antiporters AT1G15460 64.0 5.3e-210 728.0
Cmo14g00972 CST 102 645 Antiporters AT1G15460 59.0 5.2e-181 631.7
Cmo01g00278 CST 102 645 Antiporters AT1G15460 58.8 4.9e-179 625.2
Cmo13g00915 . 102 644 Antiporters AT1G15460 57.6 6.0e-177 618.2
Cmo01g00278 CST 3 697 Antiporters AT3G06450 70.7 9.9e-294 1006.5
Cmo14g00972 CST 3 709 Antiporters AT3G06450 69.5 8.6e-290 993.4
Cmo13g00915 . 3 651 Antiporters AT3G06450 73.0 9.6e-281 963.4
Cmo05g00417 CST 3 635 Antiporters AT3G06450 56.2 2.2e-213 739.6
Cmo12g00272 CST 3 635 Antiporters AT3G06450 55.5 2.2e-213 739.6
Cmo14g01361 . 6 677 Antiporters AT3G06450 52.9 9.1e-207 717.6
Cmo14g00972 CST 1 716 Antiporters AT2G47160 79.1 0.0e+00 1152.9
Cmo01g00278 CST 1 702 Antiporters AT2G47160 79.0 0.0e+00 1140.6
Cmo13g00915 . 1 680 Antiporters AT2G47160 73.7 2.8e-304 1041.6
Cmo05g00417 CST 4 635 Antiporters AT2G47160 57.6 1.1e-215 747.3
Cmo12g00272 CST 4 635 Antiporters AT2G47160 56.1 1.5e-212 736.9
Cmo14g01361 . 1 677 Antiporters AT2G47160 53.5 5.7e-209 724.9
Cmo14g01361 . 1 691 Antiporters AT1G74810 67.0 1.2e-269 926.4
Cmo05g00417 CST 4 656 Antiporters AT1G74810 66.7 4.9e-255 877.9
Cmo12g00272 CST 4 652 Antiporters AT1G74810 63.9 5.5e-246 847.8
Cmo13g00915 . 7 644 Antiporters AT1G74810 58.7 2.2e-218 756.1
Cmo14g00972 CST 7 645 Antiporters AT1G74810 58.9 1.8e-217 753.1
Cmo01g00278 CST 7 645 Antiporters AT1G74810 59.2 2.0e-216 749.6
Cmo14g00972 CST 1 708 Antiporters AT3G62270 81.2 0.0e+00 1156.4
Cmo01g00278 CST 1 689 Antiporters AT3G62270 81.6 0.0e+00 1137.5
Cmo13g00915 . 1 695 Antiporters AT3G62270 75.3 2.6e-307 1051.6
Cmo05g00417 CST 4 635 Antiporters AT3G62270 60.2 4.3e-222 768.5
Cmo12g00272 CST 4 635 Antiporters AT3G62270 57.5 2.1e-216 749.6
Cmo14g01361 . 1 677 Antiporters AT3G62270 55.3 1.3e-213 740.3
Cmo05g00417 CST 4 654 Antiporters AT4G32510 68.2 2.0e-264 909.1
Cmo12g00272 CST 4 654 Antiporters AT4G32510 67.0 2.1e-258 889.0
Cmo14g01361 . 1 691 Antiporters AT4G32510 62.8 6.0e-253 870.9
Cmo01g00278 CST 1 659 Antiporters AT4G32510 54.7 6.9e-209 724.5
Cmo13g00915 . 1 650 Antiporters AT4G32510 54.8 7.6e-208 721.1
Cmo14g00972 CST 1 646 Antiporters AT4G32510 54.7 4.2e-206 715.3
Cmo05g00417 CST 4 652 Antiporters AT5G25430 69.1 2.9e-260 895.2
Cmo12g00272 CST 4 652 Antiporters AT5G25430 68.5 5.0e-260 894.4
Cmo14g01361 . 7 685 Antiporters AT5G25430 63.2 1.0e-241 833.6
Cmo01g00278 CST 7 645 Antiporters AT5G25430 56.0 3.8e-207 718.8
Cmo13g00915 . 7 656 Antiporters AT5G25430 55.0 3.9e-204 708.8
Cmo14g00972 CST 7 645 Antiporters AT5G25430 55.5 3.9e-204 708.8
Cmo04g02249 . 27 852 Antiporters AT2G01980 74.1 0.0e+00 1189.1
Cmo04g02249 . 23 738 Antiporters AT1G14660 65.9 6.9e-271 930.6
Cmo05g00106 . 23 570 Antiporters AT5G11800 78.6 3.0e-232 802.0
Cmo12g00576 CCT 16 608 Antiporters AT5G11800 74.3 4.7e-225 778.1
Cmo10g00738 CCT,CST 33 572 Antiporters AT5G11800 74.7 8.8e-216 747.3
Cmo11g00694 CCT,CST 19 662 Antiporters AT5G11800 61.6 1.0e-192 670.6
Cmo18g01218 CCT,ECH 86 614 Antiporters AT5G11800 68.5 7.0e-189 657.9
Cmo18g01218 CCT,ECH 62 599 Antiporters AT5G51710 81.2 1.1e-239 826.6
Cmo05g00106 . 51 551 Antiporters AT5G51710 68.4 1.6e-182 636.7
Cmo12g00576 CCT 46 589 Antiporters AT5G51710 65.7 1.6e-179 626.7
Cmo10g00738 CCT,CST 51 545 Antiporters AT5G51710 66.9 2.1e-174 609.8
Cmo11g00694 CCT,CST 53 635 Antiporters AT5G51710 56.1 1.2e-153 540.8
Cmo10g00738 CCT,CST 36 569 Antiporters AT2G19600 79.7 2.1e-225 779.2
Cmo05g00106 . 44 570 Antiporters AT2G19600 79.7 2.7e-225 778.9
Cmo12g00576 CCT 39 608 Antiporters AT2G19600 74.9 1.7e-219 759.6
Cmo11g00694 CCT,CST 17 659 Antiporters AT2G19600 64.0 1.4e-197 686.8
Cmo18g01218 CCT,ECH 64 619 Antiporters AT2G19600 65.5 9.7e-183 637.5
Cmo16g00368 . 143 565 Antiporters AT1G49810 75.1 9.7e-177 617.1
Cmo16g00368 . 1 582 Antiporters AT3G19490 76.3 1.4e-242 836.3
Cmo20g00085 CST 80 568 Antiporters AT5G12860 89.8 1.4e-252 869.4
Cmo02g01287 CST 80 567 Antiporters AT5G12860 89.4 1.5e-249 859.4
Cmo16g00263 . 89 577 Antiporters AT5G12860 50.1 3.6e-131 466.1
Cmo16g00263 . 86 578 Antiporters AT5G64280 68.6 6.4e-197 684.5
Cmo04g00431 . 4 493 Antiporters AT5G64280 64.8 2.5e-185 646.0
Cmo16g00263 . 1 578 Antiporters AT5G64290 68.1 3.3e-212 735.3
Cmo04g00431 . 22 493 Antiporters AT5G64290 75.8 5.2e-202 701.4
Cmo19g01035 . 841 1201 Antiporters AT4G28390 82.6 1.3e-169 593.2
Cmo08g00523 . 3 390 Antiporters AT4G28390 74.4 3.8e-156 548.5
Cmo08g00522 . 3 391 Antiporters AT4G28390 74.2 5.0e-156 548.1
Cmo08g00524 . 326 713 Antiporters AT4G28390 74.4 8.5e-156 547.4
Cmo13g01101 . 366 668 Antiporters AT4G28390 63.2 2.7e-109 392.9
Cmo18g00018 . 3 323 Antiporters AT4G28390 60.4 8.6e-108 387.9
Cmo08g00523 . 1 391 Antiporters AT3G08580 79.6 9.1e-174 607.1
Cmo08g00522 . 1 390 Antiporters AT3G08580 79.8 1.5e-173 606.3
Cmo08g00524 . 324 714 Antiporters AT3G08580 79.4 2.6e-173 605.5
Cmo19g01035 . 854 1200 Antiporters AT3G08580 77.0 3.8e-148 521.9
Cmo13g01101 . 368 668 Antiporters AT3G08580 57.6 9.0e-97 351.3
Cmo18g00018 . 27 315 Antiporters AT3G08580 59.6 1.7e-95 347.1
Cmo08g00523 . 1 391 Antiporters AT5G13490 83.2 2.2e-183 639.0
Cmo08g00524 . 324 714 Antiporters AT5G13490 83.0 6.3e-183 637.5
Cmo08g00522 . 1 390 Antiporters AT5G13490 82.4 9.1e-182 633.6
Cmo19g01035 . 885 1200 Antiporters AT5G13490 88.0 7.5e-160 560.8
Cmo13g01101 . 369 668 Antiporters AT5G13490 61.5 1.4e-105 380.6
Cmo18g00018 . 28 315 Antiporters AT5G13490 63.6 9.0e-105 377.9
Cmo13g01101 . 365 662 Antiporters AT5G17400 80.5 2.2e-138 489.2
Cmo18g00018 . 25 321 Antiporters AT5G17400 76.8 5.1e-135 478.0
Cmo19g01035 . 901 1187 Antiporters AT5G17400 64.1 2.2e-109 392.9
Cmo08g00523 . 90 382 Antiporters AT5G17400 63.1 3.8e-106 382.1
Cmo08g00524 . 413 705 Antiporters AT5G17400 63.1 3.8e-106 382.1
Cmo08g00522 . 90 382 Antiporters AT5G17400 62.8 6.5e-106 381.3
Cmo10g01155 . 3 537 Antiporters AT1G08960 65.9 1.0e-186 650.6
Cmo14g00537 . 16 571 Antiporters AT5G17850 50.6 7.9e-150 528.1
Cmo06g00928 . 51 565 Antiporters AT5G17850 51.9 3.6e-147 519.2
Cmo14g00932 . 1 531 Antiporters AT2G47600 70.0 3.5e-211 731.9
Cmo14g01344 CCT,CST 1 300 Antiporters AT1G79900 67.8 8.8e-116 414.1
Cmo01g00116 CCT,CST 1 300 Antiporters AT1G79900 65.8 6.3e-114 407.9
Cmo08g00656 CCT,CST 811 1100 Antiporters AT1G79900 68.0 3.1e-113 405.6
Cmo17g00772 CCT,CST 13 313 Antiporters AT1G79900 65.6 2.7e-109 392.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0051241 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9391 PF03151 TPT 3.40E-113 CL0184 Cmo TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cmo03g00550 Cmo_Chr03 FPKM 2.947207 3.090832 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0