Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00551 ATGGACTTACTGGATGCCGCTGTTCTTCTCCTGGCCTTCCTTTTTTTCTCCTTGTGGTGGCGTTACTGGTCTGCTACTGGGGGTGGCTCCAAGAATCTCCCTCCTGGGCCACCGGGCTGGCCGATTGTCGGAAATCTCATACAAGTTATTCTCCAACGTCGTCCGTTTATTTTCGTGGCTCGCGATTTACGTGAAAAATATGGTCCCATTTTCACAATGCAAATGGGGCAACGCACACTCATCATTGTGTCTAGTGCGGAGTTGATTCACGAAGCTCTCGTGCAGCGTGGTCCCTTATTTGCCAGTCGTCCTGCTGACTCACCTATTCGCCTAGTCTTTAGCGTCGGAAAATGCGCTGTCAACTCAGCTGAGTATGGTCCCCTGTGGCGAACACTCCGCCGTAACTTCGTGACGGAGCTGATAAACCCGGCGAGAATCAAGCAATGTAGTTGGATAAGGAAGTGGGCGATTAAAAGCCATTTGGAAAGACTGAGGAAAGAGAATTCGGAGAAGGGATTCGTGGAGGTTATGAGCAACTGCCGGCTGTCGGTATGTAGCATTCTGATCTGTATATGCTTTGGAGCGAAAATCCCGGAAGAGGAGATTAAGGTGATAGAGAGTATACTGAAGGACGTGATGTTGATTACGTTGCCGAAGCTCCCTGACTTTTTGCCGGTGCTCACACCTTTGTTCCGACGGCAACTGAAGCAGGCGAAGGAGCTGAGGAGAAAACAGTTGGAATGTCTGATACCGTTGATAAGGAGGAGAAGGTTGTTCGTTGAGAGGAATGGGGATGAGAGCGTGATGAAGGATTTGCCGGAGATGGTTAGTCCAATTGGAGCTGCGTATCTTGATTCGCTATTTGAACTGGAAACGCCTGGACGTGGGCGGTTGGGGGAGGAGGAGCTGGTCACGCTTTGTTCGGAGGTAATTAATGCCGGAACTGATACCAGCGCCACGGCGCTGGAGTGGGCTTTGCTTCATTTGGTTCAAGACCAACACATTCAGGAAAGACTATACAACGAAATCATTAGCGTTGTGGGTAAAGATGGTGTGGTAACCGAAGGCGACGTAGAGAAAATGCCATATCTAGGGGCAGTTGTGAAAGAGACATTCCGGCGACACCCTCCCAGCCATTTCTTACTATCTCACGCGGCGACGAAAGAGACGGAGCTCGGTGGATACACGATCCCGGCGGACGCCAGCGTGGAGTTTTACACGGCTCATTTATCGGACGACCCCAACACGTGGGAAGAACCGGGTTCGTTTCGGCCGGATAGGTTCTTGGAAGGCGACGGTGTTGGCGTGGACGTAACAGGAACTAAGGGCGTCAAGATGGTGCCGTTCGGGGCAGGACGGCGGATCTGCCCGGCCATGACATTGGGGACGTTGCATGTTCACATGATGCTGGCAAGAATGGTACAGGCATTCAAGTGGGTCCCGGCTCCTGGAGCCCCCCCCGACCCGACCGAGACTTTTGCGTTTACGGTGATTATGAAGAACCCTCTGAAGGCTACCATATTGGAGAGGTCGGGTTAA 1539 52.11 MDLLDAAVLLLAFLFFSLWWRYWSATGGGSKNLPPGPPGWPIVGNLIQVILQRRPFIFVARDLREKYGPIFTMQMGQRTLIIVSSAELIHEALVQRGPLFASRPADSPIRLVFSVGKCAVNSAEYGPLWRTLRRNFVTELINPARIKQCSWIRKWAIKSHLERLRKENSEKGFVEVMSNCRLSVCSILICICFGAKIPEEEIKVIESILKDVMLITLPKLPDFLPVLTPLFRRQLKQAKELRRKQLECLIPLIRRRRLFVERNGDESVMKDLPEMVSPIGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATALEWALLHLVQDQHIQERLYNEIISVVGKDGVVTEGDVEKMPYLGAVVKETFRRHPPSHFLLSHAATKETELGGYTIPADASVEFYTAHLSDDPNTWEEPGSFRPDRFLEGDGVGVDVTGTKGVKMVPFGAGRRICPAMTLGTLHVHMMLARMVQAFKWVPAPGAPPDPTETFAFTVIMKNPLKATILERSG 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5505971 5508113 + CmoCh03G005510.1 Cmo03g00551 378014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00551 512 Pfam Cytochrome P450 34 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 Gene3D Cytochrome P450 29 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cmo03g00551 512 PANTHER CYTOCHROME P450 LIKE PROTEIN 4 509 - -
Cmo03g00551 512 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00551 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 509 - -
Cmo03g00551 512 SUPERFAMILY Cytochrome P450 34 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00551 Cmo-Chr3:5505971 Cmo04g02650 Cmo-Chr4:19269559 6.91E-162 dispersed
Cmo03g00551 Cmo-Chr3:5505971 Cmo15g00488 Cmo-Chr15:2228428 1.39E-166 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00551 K21995 - csv:101216852 962.6