Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00591 | ATGGCAACCTCATGTTTTGGTTCACTTTGGATTCGAAAATCAAAGAGCAAACCCTTATCAACACCTTCCTCATTGAAATCCCAGAAGAATTCCGAAATGGAAAATATGGAAAGAAGAAGATTTGATAGCTTGGAATCATGGTCGATGATCTTAGAGTCCGACAATGTCGAAACTTGGGAGACATCGAAAGAGGATCAGGAAGAATGGACCGCTGATCTATCTCAACTCTTCATCGGTAACAAATTCGCCTCCGGTGCTCACAGTCGAATATACCGTGGAATTTACAAACAGAGAGCCGTCGCTGTTAAGATGGTTAGAATCCCAAACCAAAACGAGGAAACCAGAGCCAAACTCGAGCAACAATTCAAGTCAGAAGTCGCCTTGCTTTCTCGTCTCTTTCATCCCAACATAGTTCAGTTAAATTCATGGTGGGTTCCTCTTCAGTTCATTGCAGCCAGTAAAAAGCCGCCGGTATACTGCATAATTACAGAGTATATGTCACAAGGTACTCTGAGGATGTATTTAAACAAGAAAGAGCCATATTCACTCTCAACAGAAACAATTCTAAGGTTAGCTCTTGACATATCAAGAGGAATGGAATACCTTCATTCCCAAGGAGTAATCCACAGAGACTTGAAATCAAACAACTTGCTCTTAAACGATGAAATGAGAGTAAAAGTAGCCGATTTCGGAACCTCCTGCCTCGAAACACAGTGCCGTGAATCGAAAGGAAACATGGGAACTTACCGATGGATGGCGCCGGAGATGATCAAGGAGAAGCCATATACACGCAAAGTTGATGTTTACAGCTTTGGGATTGTGCTGTGGGAGCTCACCACGGCTCTGCTTCCGTTTCAAGGGATGACCCCTGTTCAGGCTGCCTTTGCCGTCGCCGAGAAGAATGAGAGGCCGCCGTTACCGGCGAGTTGTCAGCCGGCGCTAGCCCACCTGATAAAACGATGTTGGGCGGCGAATCCGTCGAAGCGGCCGGATTTCAGTGACATTGTGGTGGCTTTGGAGAAATACGACGAGTGTGTGAAAGAGGGTCTTCCGCTTGCACATCATAGAAGATTGGTAAACCGAAACGCCATTATTGAACGCTTCAAAGCTTGTACCTCAACCGCGTCTTCAATACCTGTACATGCCTGA | 1149 | 45.69 | MATSCFGSLWIRKSKSKPLSTPSSLKSQKNSEMENMERRRFDSLESWSMILESDNVETWETSKEDQEEWTADLSQLFIGNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQNEETRAKLEQQFKSEVALLSRLFHPNIVQLNSWWVPLQFIAASKKPPVYCIITEYMSQGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETQCRESKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQPALAHLIKRCWAANPSKRPDFSDIVVALEKYDECVKEGLPLAHHRRLVNRNAIIERFKACTSTASSIPVHA | 382 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5670918 | 5672614 | + | CmoCh03G005910.1 | Cmo03g00591 | 378054 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00591 | 382 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 336 | IPR011009 | - | |
Cmo03g00591 | 382 | MobiDBLite | consensus disorder prediction | 15 | 35 | - | - | |
Cmo03g00591 | 382 | Gene3D | Phosphorylase Kinase; domain 1 | 65 | 167 | - | - | |
Cmo03g00591 | 382 | MobiDBLite | consensus disorder prediction | 15 | 30 | - | - | |
Cmo03g00591 | 382 | Gene3D | Transferase(Phosphotransferase) domain 1 | 168 | 363 | - | - | |
Cmo03g00591 | 382 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 207 | 219 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo03g00591 | 382 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 | 9 | 370 | - | - | |
Cmo03g00591 | 382 | Pfam | Protein tyrosine and serine/threonine kinase | 78 | 338 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo03g00591 | 382 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 9 | 370 | - | - | |
Cmo03g00591 | 382 | ProSiteProfiles | Protein kinase domain profile. | 76 | 358 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo03g00591 | 382 | PRINTS | Tyrosine kinase catalytic domain signature | 310 | 332 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo03g00591 | 382 | PRINTS | Tyrosine kinase catalytic domain signature | 163 | 176 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo03g00591 | 382 | PRINTS | Tyrosine kinase catalytic domain signature | 266 | 288 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo03g00591 | 382 | PRINTS | Tyrosine kinase catalytic domain signature | 247 | 257 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo03g00591 | 382 | PRINTS | Tyrosine kinase catalytic domain signature | 201 | 219 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo03g00591 | 382 | SMART | serkin_6 | 76 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo03g00591 | 382 | CDD | STKc_MAP3K-like | 83 | 336 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00591 | Cmo-Chr3:5670918 | Cmo13g00921 | Cmo-Chr13:8137683 | 7.89E-137 | dispersed | |
Cmo17g01175 | Cmo-Chr17:9450541 | Cmo03g00591 | Cmo-Chr3:5670918 | 1.07E-58 | dispersed | |
Cmo03g00591 | Cmo-Chr3:5670918 | Cmo07g00331 | Cmo-Chr7:1551809 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74187 | PF07714 | PK_Tyr_Ser-Thr | 6.60E-64 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00591 | - | - | cmo:103484647 | 710.679 |