Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00649 | ATGAGGGTTATTTGCCTTCTAGTATTGATGCTTCTCTTCAATGGGAGTTCTTCAATTGGAGATAGCAAAAATGTATCCATGAGACCTGATGTTGTCGACATTGGGGCTTTATTCTCTTTCAGTTCTATGATCGGCAGAGTTGGAAAAATTGCCGTGGAAGCTGCGGTCGAGGATGTAAATTCCGATCCATCCATCTTGGGGGGGACGAAGCTGAAGCTCAGTTTACATGATACCAATTACAGTGGATTCTTGGGCATCATTGAATCCTTGCGTTTCATGGAGACTAAGACTTTGGCCATAATTGGCCCACAAAACTCTGTGACTGCTCATGTTTTATCTCATATTGCAAACGAGCTCCAAGTCCCTTTATTGTCGTTTTCGGCTACAGATCCCACACTGTCATCACTTCAGTTTCCTTTCTTTATTAGAACTTCACAGAATGATCTGTATCAGATGGCTGCCGTAGCTGAAATAGTTGATTACTTTCAATGGAGACAAGTGATTGCCATCTTTGTTGATGACGACCATGGTAGAAATGGTATTGCAGCATTGGGGGATCAACTTAATGAGAAACGATGCAAGATCTCGTTAAAAGTACCATTGAAGCCTGATGCAAGTCGAGACGAGGTCACTGATGCACTTGTTAAGGTGGCTTTATCAGAGTCTCGGATACTCGTTGTTCACACTTATGAGACCACAGGTATGGTGGTGCTCGATGTGGCTCGATCTCTTGGAATGACAGAACCTGGGTATGTATGGATAGCTACTAACTGGCTTTCTTTACTACTCGACACGAATTCTCCTCTACCTTCTTCTTCTATGGAAAATATTCAAGGACTTGTTGCTTTGCGTCTTTATTCACCAGATTCTGCACTGAAGAGGAGTTTTGTTTCAAGGTGGACTAACTTGACTAATGGAAAGGCATCAAGTGGTCCGCTCGGGTTGAGTACGTATGGATTATATGCTTACGATACGGTTTGGATGCTGGCTCATGCAATAAACGCATTTCTTAATGAAGGTGGAGATCTTTCATTCTCAAAACCTTCCAAGTTTACTGGAACTGATGTTGGAACTTTGAACTTGAACTCTATGAGCATCTTCAATGGTGGGAAGACACTACTTCATAGAATTTTAGACGTCAAGTTTACTGGAATAACAGGTCGAGTTGAGTTCACTCCAGATAGGGACATAATCCGCCCTGCATTCGAAGTGATCAACATAATCGGCACGGGAGAGAGGAGAATTGGTTATTGGTCTAACTATTCTGGTTTGTCAACTGTGCCTCCTGAAAGCCTTTACTCGAAACCACCTAACCGAACCAGTTCTAATCAAAAGCTATATGATGTGGTATGGCCTGGACAAGCAACACAGAAGCCTCGTGGATGGGCATTTCCAAACAGTGGAAGACGATTGAGAATCGGAGTCCCGAGACGAGTAGGTTATCAAGAATTTGTCTCACAAGTAGAAGGAACCGACATGTTCCGAGGCTACTGCGTCGATGTCTTTACTGCAGCAATCAACTTGTTGCCTTATGCAGTCCCCTATAAGTTAATTCCATTTGGAGATGGCGTTACTAATCCGAGCGGAACCGAACTTGTTCGTCTACTCTCAACTGGGGTCTTTGATGCAGCTATGGGTGACATCGCAATTATCACGAACCGAACCAGGATGGCCGACTTTACGCAGCCATACATCGAGTCTGGCTTAGTAGTCGTAGCCCCGGTCAAGAAGTTGAACTCTAATGCTTGGGCTTTTTTACGGCCGTTCACCCCGAAGATGTGGTGCATTACTGCTGTGTCTTTTCTTGTAATAGGAGCAGTTGTTTGGACTTTAGAGCATCGGATAAATGACGATTTTCGGGGGCCTCCGAAGCGACAAATTATTACTATTCTATGGTTCAGCTTTTCAACTCTGTTCTTCTCTCATCGGGAAAACACCGTCAGTACCCTCGGTCGAATCGTGCTGCTCGTATGGTTATTTGTTGTTCTAATTATCAACTCGAGCTACACTGCAAGCTTGACCTCTATCCTTACAGTTCAACAACTTTCTTCTCCTGTCAAAGGGATTGAAACTTTGATTTCAAACAATGACCCAATTGGCTATCAGCAGGGTTCATTTGCTCGAAACTACTTGATCGAGGAACTTGGCATTCATGAGTCGAGACTCGTTCCACTCGTCTCAACAGAACACTATGTCAAAGCATTGAATGACGGGCCAACGAATAACGGTGTTGCTGCTATTATCGACGAGCGAGCATATGTAGAGCTCTTCCTTTCGACCCGTTGCGAATACAGCATTGTTGGCCAAGAGTTCACCAAAAATGGGTGGGGATTTGCTTTCCAGCGCGACTCTCCTTTAGCAGTTGACATGTCCACAGCTATTCTTAGACTCTCCGAAAATGGTGATCTTCAAAGGATCCATGACAAATGGTTAATGAAAAGTGCTTGTACATCACAAGCCTCGAAATTCGAGGTGGATCGACTTCAGCTCGGTAGCTTTTGGGGACTTTTTCTAATATCTGGATTAGCCTGCTTGCTCGCTCTATTGATATACCTCTTTCTAACGGTGCGCCAATATAGCAAGCATTACCCTGAAGAACTTGGGTCTTCCGAGCGATCTTCTCGATCGTCAAGCTTGCATAGATTTCTTTCTTTTGCAGATGAAAAGGAAGAAGTCATCAAAAGTCGATCCAAGCGTCGACGGATGCAGGAGGCTTCGGTTCGAAGCATGAATGAAGAAAATTCGACATGCAGTTCAAGAAAACATGGCCATGATGATGGTTATGATATTGATGCATGA | 2799 | 43.94 | MRVICLLVLMLLFNGSSSIGDSKNVSMRPDVVDIGALFSFSSMIGRVGKIAVEAAVEDVNSDPSILGGTKLKLSLHDTNYSGFLGIIESLRFMETKTLAIIGPQNSVTAHVLSHIANELQVPLLSFSATDPTLSSLQFPFFIRTSQNDLYQMAAVAEIVDYFQWRQVIAIFVDDDHGRNGIAALGDQLNEKRCKISLKVPLKPDASRDEVTDALVKVALSESRILVVHTYETTGMVVLDVARSLGMTEPGYVWIATNWLSLLLDTNSPLPSSSMENIQGLVALRLYSPDSALKRSFVSRWTNLTNGKASSGPLGLSTYGLYAYDTVWMLAHAINAFLNEGGDLSFSKPSKFTGTDVGTLNLNSMSIFNGGKTLLHRILDVKFTGITGRVEFTPDRDIIRPAFEVINIIGTGERRIGYWSNYSGLSTVPPESLYSKPPNRTSSNQKLYDVVWPGQATQKPRGWAFPNSGRRLRIGVPRRVGYQEFVSQVEGTDMFRGYCVDVFTAAINLLPYAVPYKLIPFGDGVTNPSGTELVRLLSTGVFDAAMGDIAIITNRTRMADFTQPYIESGLVVVAPVKKLNSNAWAFLRPFTPKMWCITAVSFLVIGAVVWTLEHRINDDFRGPPKRQIITILWFSFSTLFFSHRENTVSTLGRIVLLVWLFVVLIINSSYTASLTSILTVQQLSSPVKGIETLISNNDPIGYQQGSFARNYLIEELGIHESRLVPLVSTEHYVKALNDGPTNNGVAAIIDERAYVELFLSTRCEYSIVGQEFTKNGWGFAFQRDSPLAVDMSTAILRLSENGDLQRIHDKWLMKSACTSQASKFEVDRLQLGSFWGLFLISGLACLLALLIYLFLTVRQYSKHYPEELGSSERSSRSSSLHRFLSFADEKEEVIKSRSKRRRMQEASVRSMNEENSTCSSRKHGHDDGYDIDA | 932 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 5886528 | 5890593 | - | CmoCh03G006490.1 | Cmo03g00649 | 378112 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00649 | 932 | MobiDBLite | consensus disorder prediction | 890 | 907 | - | - | |
Cmo03g00649 | 932 | Gene3D | - | 50 | 399 | - | - | |
Cmo03g00649 | 932 | Gene3D | - | 147 | 424 | - | - | |
Cmo03g00649 | 932 | MobiDBLite | consensus disorder prediction | 915 | 932 | - | - | |
Cmo03g00649 | 932 | MobiDBLite | consensus disorder prediction | 890 | 932 | - | - | |
Cmo03g00649 | 932 | Gene3D | - | 463 | 581 | - | - | |
Cmo03g00649 | 932 | SUPERFAMILY | Periplasmic binding protein-like I | 28 | 462 | IPR028082 | - | |
Cmo03g00649 | 932 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 528 | 811 | IPR001638 | - | |
Cmo03g00649 | 932 | Pfam | Receptor family ligand binding region | 50 | 408 | IPR001828 | - | |
Cmo03g00649 | 932 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 45 | 61 | - | - | |
Cmo03g00649 | 932 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 105 | 133 | - | - | |
Cmo03g00649 | 932 | PRINTS | Metabotropic gamma-aminobutyric acid type B receptor signature | 322 | 334 | - | - | |
Cmo03g00649 | 932 | Gene3D | - | 756 | 818 | - | - | |
Cmo03g00649 | 932 | SMART | GluR_14 | 472 | 813 | IPR001320 | GO:0015276|GO:0016020 | |
Cmo03g00649 | 932 | PIRSF | IGluLR_plant | 1 | 929 | IPR017103 | - | |
Cmo03g00649 | 932 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 13 | 925 | - | - | |
Cmo03g00649 | 932 | CDD | GluR_Plant | 469 | 811 | - | - | |
Cmo03g00649 | 932 | CDD | PBP1_GABAb_receptor_plant | 33 | 428 | IPR044440 | - | |
Cmo03g00649 | 932 | Gene3D | - | 582 | 708 | - | - | |
Cmo03g00649 | 932 | PANTHER | GLUTAMATE RECEPTOR 3.6 | 13 | 925 | - | - | |
Cmo03g00649 | 932 | SUPERFAMILY | Periplasmic binding protein-like II | 449 | 814 | - | - | |
Cmo03g00649 | 932 | Pfam | Ligand-gated ion channel | 812 | 843 | IPR001320 | GO:0015276|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo01g02083 | Cmo-Chr1:14490476 | Cmo03g00649 | Cmo-Chr3:5886528 | 0 | dispersed | |
Cmo03g00649 | Cmo-Chr3:5886528 | Cmo09g00038 | Cmo-Chr9:167186 | 0 | dispersed | |
Cmo19g00823 | Cmo-Chr19:8110181 | Cmo03g00649 | Cmo-Chr3:5886528 | 0 | wgd | |
Cmo03g00649 | Cmo-Chr3:5886528 | Cmo07g00376 | Cmo-Chr7:1726781 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00649 | K05387 | - | csv:101213408 | 1612.82 |