Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00674 ATGAGTTCTTGTATGCTTCAAGACCGTGGCTTGCGCCCGGGGCTTGCTGCGGCAGACCAATCAATTCCCTACTGGAACAACAAGGCCGACAATGCATGGCAGCTCACGGCAGCCACCATGGTCGGCCTCCAAACTGTTCCGGGGCTGGTCATCCTCTATGGCAGCATGGTGAAGAAAAAATGGGCTGTCAACTCCGCCTTCATGGCGCTCTATGGCTTCGCTTCTGTGCTCGTCTGTTGGGTGTTGTGGGCACATCGTATGGCATTCGGTGACCGATTGTTCTGGCTCATTGGTGTGCCTGGTGCAGCGCTGTCTGAAGGGTACCTTCTTTCACATTCTACACAAGGCTGTTTCCCAATGGCTGACTACGTGTTTTTCCAGTTCGCTTTCGCCGCCATTACTGTCGTGTTGCTTGCCGGGTCCTTGCTGGGAAGGATGAATTTTGGTGCATGGATGCTTTTTGTTCCAATGTGGCTAACTGTTTGTTACACTGTTGGGGCATTCTGTATATGGGGGAATGGGTTTATTCAGAAGTACCTCATTGATTACGCCGGCGGCTATGTCATTCATCTTTCTTCTGGGGTGGCTGGTTTCACTGCCGCTTACTGGGTCGGGCCACGACACTCCCGCGACAGGCAAAGCTTCCCACCAAACAACATACTCCACATGGTATTTGGGGCAGGGTTTCTTTGGCTGGGCTGGACTGGATTCAATGGAGGAGCTCCATTTGCAGCGGGTCGGATTACGTCGCTAGCCATTTTGAACACGCATATTTGCACAGCAACAAGTCTGTTGATCTGGGTTTCAATGGACATCATAGTATACAAGAAAAGCTCTGTGATTGGTGCAGTTCAAGGGATCATCACTGGCCTTGTCTGTATCACTCCTGGTGCAGGGCTTGTGGACTCGGTCGCAGCTGTGGTGATGGGTGTGCTTGCTGGTTTGGTTCCATGGTACACCATGATGGTGCTGCACAGGAAGCTGGCATTCCTTCAGTGTGTCGACGATACTCTGGGTGTCTTCCACACACATGCTGTGGCTGGCTCCATGGGAGGACTCCTCACAGGTTTCTTTGCTAAACCCAGCCTTTTGAAAATGATGTATCCAGATTCTCTATATGGTCCAGGCTTCCTGTATGCCATCTCCAATAGAAAGCTCAAAGATGGCCTCAAACAAATTGGCATCCAGTTCGCTGGAGCAGTGTTTATCACCCTCTGGAATGCCATCTTTACCAGCATTATCTGTTACCTGATTAGCCATATTGTTAACTTAAGAATGAAAGAAGAGGACCTGGAAATAGGCGACGACGCTGCTCATGGAGAAGAACCCTATGCATTGTGGGGCGACGGAGAGAAGATGCCCTCTTCATTTCGTCTTCCACACACCCCTAGGTTCCCATCATTATGCAGGTGGGATTAG 1419 50.67 MSSCMLQDRGLRPGLAAADQSIPYWNNKADNAWQLTAATMVGLQTVPGLVILYGSMVKKKWAVNSAFMALYGFASVLVCWVLWAHRMAFGDRLFWLIGVPGAALSEGYLLSHSTQGCFPMADYVFFQFAFAAITVVLLAGSLLGRMNFGAWMLFVPMWLTVCYTVGAFCIWGNGFIQKYLIDYAGGYVIHLSSGVAGFTAAYWVGPRHSRDRQSFPPNNILHMVFGAGFLWLGWTGFNGGAPFAAGRITSLAILNTHICTATSLLIWVSMDIIVYKKSSVIGAVQGIITGLVCITPGAGLVDSVAAVVMGVLAGLVPWYTMMVLHRKLAFLQCVDDTLGVFHTHAVAGSMGGLLTGFFAKPSLLKMMYPDSLYGPGFLYAISNRKLKDGLKQIGIQFAGAVFITLWNAIFTSIICYLISHIVNLRMKEEDLEIGDDAAHGEEPYALWGDGEKMPSSFRLPHTPRFPSLCRWD 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5981770 5983684 + CmoCh03G006740.1 Cmo03g00674 378137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00674 472 Pfam Ammonium Transporter Family 32 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
Cmo03g00674 472 ProSitePatterns Ammonium transporters signature. 182 207 IPR018047 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00674 Cmo-Chr3:5981770 Cmo05g00418 Cmo-Chr5:1926187 0 dispersed
Cmo03g00674 Cmo-Chr3:5981770 Cmo06g00209 Cmo-Chr6:1128381 8.57E-170 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00674 K03320 - csv:101218977 907.131