Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00683 | ATGCAATTACAGGAGCCGGTTATCAGATTGAGGAGTTTTGCTGCTTTGAATTGTCGTCGTGAAGGCTTACTATGGTACAAGGATATTGGACAGCACATGAATGGTGAATTTTCAATGGCTGTTGTCCAGGCTAATAACTTGCTTGAGGATCAAAGCCAGATCGAATCGGGTTCATTGAGCTTGGTCGAGTCCGGGCCATATGGAACCTTTATTGGTGTTTATGATGGTCATGGTGGACCGGAAGCATCAAATTACATATATGATAATCTTTTCCAGCATCTAAAAAGGTTCACCTCAGAACAACAATCAATGTCTTCTGATGTGATAAAGAAAGCATTTCAAGCTACAGAGGAAGGGTTCATTTCTTTAGTGACTAAACAATGGCAAATGAAGCCCCAAATTGCAGCTGTTGGTTCATGCTGCCTGGTTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAACCTTGGCGATTCCCGTGCCGTGCTTGGAAGGGTCATGCGTGCAACGGAGGAGGTTATCGCCGTGCAGCTATCAGCTGAGCATAATGTGAGCATAGAATCTGTCAGAAGGGAGATGCATTCTCTGCACCCAGATGACTCGCATATAGTAGTTTTGAAGCATAATGTATGGCGAGTAAAGGGCTTAATACAGGTTTCCAGATCTATCGGTGATGCATATTTAAAGAGGGCCGAATTCAACAGGGAACCCTTGTATGCTAAGTTTAGGCTTCGTGAACCATTTACTCGACCGATATTGAGCTGTGAACCATCAATTTCGGTGCATGAACTTCAACCACATGATCAATTCATCATATTTGCCTCTGATGGCATGTGGGAGCACATTAGCAATCAGCAAGCTGTAGATATTATTCGAAATCACCCCCATAATGGAAGTGCTAAGAGGTTGGTAAAAGCTGCTATGCTGGAAGCAGCTAAGAAACGAGAAATGCGATATTCAGATTTGATGGAAATTGATCGTGGTGTACGCCGCCATTTTCACGACGACATCACCGTCATAGTTGTATTTCTTGACTCTAATCTTGTAAGCAGAGCGAGCTCGGTCCGAGGTCCAACCATGTCTTTGAGAGGGCGCGGTGTTATCATACCTACAAAATCTCTAGCTCCTTGTGCCACACCTACAGAGCTTCACACAATCTGA | 1161 | 44.36 | MQLQEPVIRLRSFAALNCRREGLLWYKDIGQHMNGEFSMAVVQANNLLEDQSQIESGSLSLVESGPYGTFIGVYDGHGGPEASNYIYDNLFQHLKRFTSEQQSMSSDVIKKAFQATEEGFISLVTKQWQMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVMRATEEVIAVQLSAEHNVSIESVRREMHSLHPDDSHIVVLKHNVWRVKGLIQVSRSIGDAYLKRAEFNREPLYAKFRLREPFTRPILSCEPSISVHELQPHDQFIIFASDGMWEHISNQQAVDIIRNHPHNGSAKRLVKAAMLEAAKKREMRYSDLMEIDRGVRRHFHDDITVIVVFLDSNLVSRASSVRGPTMSLRGRGVIIPTKSLAPCATPTELHTI | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 6014543 | 6017561 | - | CmoCh03G006830.1 | Cmo03g00683 | 378146 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00683 | 386 | CDD | PP2Cc | 37 | 344 | IPR001932 | - | |
Cmo03g00683 | 386 | ProSitePatterns | PPM-type phosphatase domain signature. | 70 | 78 | IPR000222 | GO:0043169 | |
Cmo03g00683 | 386 | Gene3D | - | 26 | 354 | IPR036457 | - | |
Cmo03g00683 | 386 | PANTHER | PROTEIN PHOSPHATASE 2C 60-RELATED | 17 | 374 | - | - | |
Cmo03g00683 | 386 | Pfam | Protein phosphatase 2C | 69 | 315 | IPR001932 | - | |
Cmo03g00683 | 386 | ProSiteProfiles | PPM-type phosphatase domain profile. | 36 | 344 | IPR001932 | - | |
Cmo03g00683 | 386 | SUPERFAMILY | PP2C-like | 45 | 345 | IPR036457 | - | |
Cmo03g00683 | 386 | PANTHER | ALPHABET, ISOFORM E-RELATED | 17 | 374 | - | - | |
Cmo03g00683 | 386 | SMART | PP2C_4 | 30 | 342 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00266 | Cmo-Chr2:1281411 | Cmo03g00683 | Cmo-Chr3:6014543 | 0 | dispersed | |
Cmo03g00683 | Cmo-Chr3:6014543 | Cmo07g00399 | Cmo-Chr7:1819193 | 0 | dispersed | |
Cmo20g00446 | Cmo-Chr20:2072912 | Cmo03g00683 | Cmo-Chr3:6014543 | 3.25E-40 | dispersed | |
Cmo16g01301 | Cmo-Chr16:9262899 | Cmo03g00683 | Cmo-Chr3:6014543 | 0 | wgd | |
Cmo20g00737 | Cmo-Chr20:3678588 | Cmo03g00683 | Cmo-Chr3:6014543 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00683 | K01102 | - | csv:101219696 | 690.263 |