Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00688 ATGGCCTCATTTGCTGTGGTATTCTCGCACTTTGCAATTCTTTTGCTGTCTGTTTTGCCTTTGGGGAGTTCACTGAGCTTAGACTACTACGAGAAGACATGTCCAGGTGTTGACTTCATCGTTAATAAAGCTGTCAAGAGTGCAGCTTACAAAGACAAGACTGTCCCTGCGGGACTCCTCCGGATGCACTTTCATGACTGTTTTATAAGGGGCTGTGATGCATCTGTACTGCTGAATTCAGTAGGGAACAACAAAGCTGAGAAAGATGGGCCTCCTAATTTGTCTTTGCACTCGTTTTTCGTGATCGACAACGCAAAGAAAGAACTGGAATCCTATTGCCCCGGTGTTGTCTCTTGTGCTGATATTGTGGCTCTAGCTGCAAGGGATGCAGTTGTGCTTTCTGGAGGCCCAACATGGGATGTTCCCAAAGGGAGAAAGGATGGAAGGATATCAAAGGCTAGTGAAACAATACAATTGCCATCTCCAAGGTTCAACATTTCTCAGCTGCAACAAAGCTTCTCCCAAAGGGGATTGTCCTTGGACGACCTAGTGGCTCTTTCAGGAGCACACACCTTGGGATTTGCTCATTGCTCATCCTTTGAAGGTAGAATTCGCAACTTCTGTCCAGCCAGCAACGTCGACCCTGAGATGAATCCGTCCTTTGCAGCAAGTCTAAGAAACACATGCCCAGTAAACAACAAGGCTAAAAATGCTGGTGCTTACATGGATACTTCTTCAACCACATTTGACAACAATTACTATAGACTGATACTTCAAAAGAAGGCCCTGTTTTCTTCTGACCAAGCTCTGCTAAACTTTCCTAAGACCAAGAATCTTGTTTATAAGTTTGCAAGTTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATCACTGGAGGTCAAGAGATCAGGAAGAATTGTAGGGCAGTGAACTAA 957 44.2 MASFAVVFSHFAILLLSVLPLGSSLSLDYYEKTCPGVDFIVNKAVKSAAYKDKTVPAGLLRMHFHDCFIRGCDASVLLNSVGNNKAEKDGPPNLSLHSFFVIDNAKKELESYCPGVVSCADIVALAARDAVVLSGGPTWDVPKGRKDGRISKASETIQLPSPRFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFEGRIRNFCPASNVDPEMNPSFAASLRNTCPVNNKAKNAGAYMDTSSTTFDNNYYRLILQKKALFSSDQALLNFPKTKNLVYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6034619 6036094 + CmoCh03G006880.1 Cmo03g00688 378151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00688 318 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 CDD secretory_peroxidase 25 317 IPR033905 GO:0004601|GO:0042744
Cmo03g00688 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cmo03g00688 318 PANTHER PEROXIDASE 25-RELATED 10 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 Gene3D Peroxidase, domain 2 160 301 - -
Cmo03g00688 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00688 318 Gene3D - 28 318 - -
Cmo03g00688 318 PANTHER PEROXIDASE 10 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00688 Cmo-Chr3:6034619 Cmo18g01236 Cmo-Chr18:12206483 2.30E-119 dispersed
Cmo10g00590 Cmo-Chr10:2674994 Cmo03g00688 Cmo-Chr3:6034619 1.64E-88 transposed
Cmo12g00345 Cmo-Chr12:2143584 Cmo03g00688 Cmo-Chr3:6034619 3.63E-153 wgd
Cmo03g00688 Cmo-Chr3:6034619 Cmo07g00403 Cmo-Chr7:1852197 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00688 K00430 - csv:101217954 587.03