Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00688 | ATGGCCTCATTTGCTGTGGTATTCTCGCACTTTGCAATTCTTTTGCTGTCTGTTTTGCCTTTGGGGAGTTCACTGAGCTTAGACTACTACGAGAAGACATGTCCAGGTGTTGACTTCATCGTTAATAAAGCTGTCAAGAGTGCAGCTTACAAAGACAAGACTGTCCCTGCGGGACTCCTCCGGATGCACTTTCATGACTGTTTTATAAGGGGCTGTGATGCATCTGTACTGCTGAATTCAGTAGGGAACAACAAAGCTGAGAAAGATGGGCCTCCTAATTTGTCTTTGCACTCGTTTTTCGTGATCGACAACGCAAAGAAAGAACTGGAATCCTATTGCCCCGGTGTTGTCTCTTGTGCTGATATTGTGGCTCTAGCTGCAAGGGATGCAGTTGTGCTTTCTGGAGGCCCAACATGGGATGTTCCCAAAGGGAGAAAGGATGGAAGGATATCAAAGGCTAGTGAAACAATACAATTGCCATCTCCAAGGTTCAACATTTCTCAGCTGCAACAAAGCTTCTCCCAAAGGGGATTGTCCTTGGACGACCTAGTGGCTCTTTCAGGAGCACACACCTTGGGATTTGCTCATTGCTCATCCTTTGAAGGTAGAATTCGCAACTTCTGTCCAGCCAGCAACGTCGACCCTGAGATGAATCCGTCCTTTGCAGCAAGTCTAAGAAACACATGCCCAGTAAACAACAAGGCTAAAAATGCTGGTGCTTACATGGATACTTCTTCAACCACATTTGACAACAATTACTATAGACTGATACTTCAAAAGAAGGCCCTGTTTTCTTCTGACCAAGCTCTGCTAAACTTTCCTAAGACCAAGAATCTTGTTTATAAGTTTGCAAGTTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATCACTGGAGGTCAAGAGATCAGGAAGAATTGTAGGGCAGTGAACTAA | 957 | 44.2 | MASFAVVFSHFAILLLSVLPLGSSLSLDYYEKTCPGVDFIVNKAVKSAAYKDKTVPAGLLRMHFHDCFIRGCDASVLLNSVGNNKAEKDGPPNLSLHSFFVIDNAKKELESYCPGVVSCADIVALAARDAVVLSGGPTWDVPKGRKDGRISKASETIQLPSPRFNISQLQQSFSQRGLSLDDLVALSGAHTLGFAHCSSFEGRIRNFCPASNVDPEMNPSFAASLRNTCPVNNKAKNAGAYMDTSSTTFDNNYYRLILQKKALFSSDQALLNFPKTKNLVYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN | 318 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 6034619 | 6036094 | + | CmoCh03G006880.1 | Cmo03g00688 | 378151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00688 | 318 | Pfam | Peroxidase | 42 | 286 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | CDD | secretory_peroxidase | 25 | 317 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo03g00688 | 318 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 318 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 97 | 110 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 116 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 135 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 181 | 193 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 240 | 255 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 256 | 273 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Plant peroxidase signature | 296 | 309 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 182 | 192 | IPR019793 | - | |
Cmo03g00688 | 318 | PANTHER | PEROXIDASE 25-RELATED | 10 | 317 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | Gene3D | Peroxidase, domain 2 | 160 | 301 | - | - | |
Cmo03g00688 | 318 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 318 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Haem peroxidase superfamily signature | 117 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Haem peroxidase superfamily signature | 135 | 147 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Haem peroxidase superfamily signature | 182 | 197 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | PRINTS | Haem peroxidase superfamily signature | 242 | 257 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00688 | 318 | Gene3D | - | 28 | 318 | - | - | |
Cmo03g00688 | 318 | PANTHER | PEROXIDASE | 10 | 317 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00688 | Cmo-Chr3:6034619 | Cmo18g01236 | Cmo-Chr18:12206483 | 2.30E-119 | dispersed | |
Cmo10g00590 | Cmo-Chr10:2674994 | Cmo03g00688 | Cmo-Chr3:6034619 | 1.64E-88 | transposed | |
Cmo12g00345 | Cmo-Chr12:2143584 | Cmo03g00688 | Cmo-Chr3:6034619 | 3.63E-153 | wgd | |
Cmo03g00688 | Cmo-Chr3:6034619 | Cmo07g00403 | Cmo-Chr7:1852197 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00688 | K00430 | - | csv:101217954 | 587.03 |