Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00743 ATGTATGCATGTAGAAATTTTGTTGAAATGCCATCAGTCAACTGGCGAGAGGTGGCTGATAACTGGTTTGGGACTTGCTGCTGCTCCTTCGGGGGGATAAGCGAGAAGCTGGTTACTAGGTACACAAATTCCTATAGATGTGCAAAGGGTGTCTGCCTACTCACTTTAACGACTATTACTCTTTACAAGGATGACCTTATTGGACATGCGTTCCCAGACTATGATGGGACCCGAGAACTCAAGGATGAATCAGATTTCACTGATGGCAATTGGTCAACTGAAGCTAAGCAAGAATCACAATGTAATCATACATCTACAGGGGAGGTAAAATCTAAGCAGTTCAATTATAAGAACCTTGTTGCAAAGACGGAGGGTAATGCTGCTGTGAAGGGAAGTGATGAAGTTGATTCACCTCTTGTGACTTCAATTCCTGACTTGCATCAACATGGAGAAAGTAATGTACTTCATGATCTTGATAGAGATTGCATGCATCACACATGTGGCACATATGAGTTAGACCCAAAGCCTATTAATACTGTAGATGTTTCGGACGACCAGATATCCTTTCTTAATGGTTTTCTTGGAAATATCTTTATGGCTAGACTGTCAAATCTTTCAGCAGATTTTGAATGGGCCGAGTTCTTTTGCCCCCAGTGTTCAACTCTGATTGGGGCTTACCCTTGCAGAAATGGCTGTGGACCTACAGATGGTGGAGTTCGACTCTTTAAATGTTATGTCTCAACATGTTTATCCACTGAACCAGAAAATTTGTTCAGGGAGTACACGTTGGAAAAAATGTTTGCATCTCAGCTACTGGAAAGTGCAAATGAAGAATCATCATTTCGTACTGTGGTTAAGGAGTTGAAAACCAAGTCTACCATGCTGCACATTGTTCTCATCAATTCAAATTCTTGGTCGTGTAGTGGTTATTGTTTGGGCATGGAGGATACTGCAGAAGTTGTTCCAAAGGTGGATTTAAATCCAATCATCAAGGTGCTATTCTCAGATTGCAACAAAAGTGCGGAATCTCACCTAAGGAAACTTGAAGAGTGGGTGACAAAAGATATAGCAGAAGAAGTTTTTATGTTAGCCCATCAAATAGAGGAATTAAATGAAATCCTAGTTTCAAGAAATGATACACTTCCATCTTCATGTTCTTCCCTTGATGGTTTAACTTTGACATCTATTCTGAGTGGAGGGCAACAAAACGGAGCTATTCACTTGAAGGTTTCAGGTGTTCTTTTACAGGCTGTTGAAACGAATGCAATTGCAGTGCCAAGTTCCAGTTGCTATGTTTTTGACAATTCTAGTCACGTCATTGACTTTGTATCCTACATAGGATACGTGGATTTTGGTCGATTTGACAAATTCAATTATTTTGTCTCTGGTTCAGGACATGCCAACTTTGTTCAAGGTTATTACTACGGTGACCTGACTTCTTGTGAGCAGAGTTATGACAAATTGGGGAGGACTGCACAGCTAGACTGTACAAAACTGGGAAAGGAAGGTAAAGTTAGACTGTACAAAACTGGGAAAGGAAGAGTTATTGTCGACTTAGCCATCCCTTGTGTGATACAAGGCCCACGTGTTTTCAAAGGATTTACTGTTGGCTTTCACCCTAGATCCTGGGAAATTGTTTACAATGGTTTAACTCAATTAGGCTTTGAGAAGCCACACCGTGCATTCAGCTTCAGCACAGAGCAGACTGGTGTGGTTCTTCATATGACTGCCATTGCATCGCTTTCCTCTTTGGTACAGAAACCAATCATTCAGGTTTTTCCAGAAAATGGACTTGAGGTGAAAGTGTCAGGTTCAGGGGCAACTGGGAGCTACCCTACAACTTTGTCACCCTCAATGTTGATGATTAACTGGAGATGTGTTATTGCCAGAGATGTTCCATATGAAGTCAATGTCACGATCCCTGTGGCTGATTATGAACCTATTATTTTTTTTCTTACCAAGACGTGTGAAAAAAGGCAGGACGTACAAGGAGATTCTATGAAAGGATGGGCCACATTTGGAATACTCTCTTGCATATTCATAGTCGTAGCATCACTATTTTGCTGTGGAGGATTTGTTTATAAGACACGAATGCAAGGCCAGTCAATTGCATCTGCATGTAGCGTGGAATTGATGCATTGCCGGGCATGGCACTACTATCCGCCTGCTTGGAAACTGCGAGTGGTGCAGGACAAAGCTACCCGAGAGCTGAAGGCATCAACAGTGGGTTCGTCAGTGAAGCCTCCTGGGATCGTTCACCATCCTCTTCATCTTCTCGACGGACATGGACACCGACTGAGAAAAATTATGGTTCAATATGAATGTCTCTCCATTTCAGATTTTAGCTCTTGGACAGTTCATGAGAGAAATTTGGCTGCATGCCATTGTATCAAGGAAGATGGCCAAAAGGGATCTAGAAATGGCGGGTTTGGGTCTCTGTACCCGCAATATTATGACCACTCCTGCCCCCATGCTAAGGCAATAGTGAAATCCATTGTGGCAAAGGCTTTTGCTAGAGAAGCTCGTAGTGCTGCTTCTATCCTTAGACTTCACTTTCATGACTGTTTTGTTCAGGGGTGTGATGCATCTTTACTACTGGACAGCAGTGGGAGCATTAGAAGCGAGAAGAATTCAAACCCAAATAGGAACTCGGCTAGAGGGTTTGAGGTGATTGATGAGATCAAATCTGCATTGGAGAAAGAGTGCCCACAAACTGTTTCTTGTGCTGATATCTTGGCTTTGGCTGCAAGAGATTCCACTGTCATTACGGGTGGACCCTTTTGGGAGGTTCCATTGGGAAGGAAAGACTCGAGAACTGCGAGCTTGAGTGGCTCCAACAACAACATTCCAGCTCCCAACAACACTTTCCAAACCATTCTCAACAGATTCCAAAACCAGGGCCTTGATATCGTTGATCTTGTCGCCTTATCTGGAGGTCACACCATCGGGAATTCAAGGTGCACCAGCTTCCGGCAGAGGCTATACAACCAGAACGGCAATGGACAGCCCGACAAAACCCTTCCCCAGCCGTACGCGGCCGAGCTTCGAAACCGCTGCCCGAGATCCGGCGGCGACAATAACCTCTTTTTCCTCGACTTCGTCAGCCCGACCAAATTCGACAACAGCTACTTCAAGAACATTGTTGGTTTCAAAGGGCTTCTCAACTCCGACCAAGTTCTCCTCACCGGAAACGACGCGTCGGCTGCTTTGGTAAAGAAATATGCCGACAACAGCGAGGTGTTCTTCGAGCAGTTCGCCAAATCCATGATCAAAATGGGCAATATTTCCCCATTGACGGGCTCAAATGGAGAGATCAGAAAGACTTGCAGGAAGATCAACAGTTAA 3345 43.89 MYACRNFVEMPSVNWREVADNWFGTCCCSFGGISEKLVTRYTNSYRCAKGVCLLTLTTITLYKDDLIGHAFPDYDGTRELKDESDFTDGNWSTEAKQESQCNHTSTGEVKSKQFNYKNLVAKTEGNAAVKGSDEVDSPLVTSIPDLHQHGESNVLHDLDRDCMHHTCGTYELDPKPINTVDVSDDQISFLNGFLGNIFMARLSNLSADFEWAEFFCPQCSTLIGAYPCRNGCGPTDGGVRLFKCYVSTCLSTEPENLFREYTLEKMFASQLLESANEESSFRTVVKELKTKSTMLHIVLINSNSWSCSGYCLGMEDTAEVVPKVDLNPIIKVLFSDCNKSAESHLRKLEEWVTKDIAEEVFMLAHQIEELNEILVSRNDTLPSSCSSLDGLTLTSILSGGQQNGAIHLKVSGVLLQAVETNAIAVPSSSCYVFDNSSHVIDFVSYIGYVDFGRFDKFNYFVSGSGHANFVQGYYYGDLTSCEQSYDKLGRTAQLDCTKLGKEGKVRLYKTGKGRVIVDLAIPCVIQGPRVFKGFTVGFHPRSWEIVYNGLTQLGFEKPHRAFSFSTEQTGVVLHMTAIASLSSLVQKPIIQVFPENGLEVKVSGSGATGSYPTTLSPSMLMINWRCVIARDVPYEVNVTIPVADYEPIIFFLTKTCEKRQDVQGDSMKGWATFGILSCIFIVVASLFCCGGFVYKTRMQGQSIASACSVELMHCRAWHYYPPAWKLRVVQDKATRELKASTVGSSVKPPGIVHHPLHLLDGHGHRLRKIMVQYECLSISDFSSWTVHERNLAACHCIKEDGQKGSRNGGFGSLYPQYYDHSCPHAKAIVKSIVAKAFAREARSAASILRLHFHDCFVQGCDASLLLDSSGSIRSEKNSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVITGGPFWEVPLGRKDSRTASLSGSNNNIPAPNNTFQTILNRFQNQGLDIVDLVALSGGHTIGNSRCTSFRQRLYNQNGNGQPDKTLPQPYAAELRNRCPRSGGDNNLFFLDFVSPTKFDNSYFKNIVGFKGLLNSDQVLLTGNDASAALVKKYADNSEVFFEQFAKSMIKMGNISPLTGSNGEIRKTCRKINS 1114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6291134 6305286 - CmoCh03G007430.1 Cmo03g00743 378206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00743 1114 Gene3D Peroxidase, domain 2 950 1093 - -
Cmo03g00743 1114 ProSitePatterns Peroxidases active site signature. 844 855 IPR019794 GO:0004601
Cmo03g00743 1114 Gene3D - 817 1113 - -
Cmo03g00743 1114 PANTHER PEROXIDASE 72-RELATED 810 1113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 ProSiteProfiles Plant heme peroxidase family profile. 812 1113 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 Pfam Peroxidase 829 1077 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PANTHER PEROXIDASE 810 1113 - -
Cmo03g00743 1114 PRINTS Haem peroxidase superfamily signature 924 936 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Haem peroxidase superfamily signature 1032 1047 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Haem peroxidase superfamily signature 844 858 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Haem peroxidase superfamily signature 906 923 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Haem peroxidase superfamily signature 972 987 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 SUPERFAMILY Heme-dependent peroxidases 813 1113 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 CDD secretory_peroxidase 813 1112 IPR033905 GO:0004601|GO:0042744
Cmo03g00743 1114 ProSitePatterns Peroxidases proximal heme-ligand signature. 972 982 IPR019793 -
Cmo03g00743 1114 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 4 386 IPR019193 -
Cmo03g00743 1114 PRINTS Plant peroxidase signature 1030 1045 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Plant peroxidase signature 971 983 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Plant peroxidase signature 1087 1100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Plant peroxidase signature 822 841 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Plant peroxidase signature 924 939 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Plant peroxidase signature 905 915 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Plant peroxidase signature 846 866 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Plant peroxidase signature 886 899 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00743 1114 PRINTS Plant peroxidase signature 1046 1063 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00743 Cmo07g00462 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00743 Cmo-Chr3:6291134 Cmo04g00821 Cmo-Chr4:4084751 1.02E-151 dispersed
Cmo14g00193 Cmo-Chr14:873646 Cmo03g00743 Cmo-Chr3:6291134 1.72E-60 dispersed
Cmo16g00692 Cmo-Chr16:3420984 Cmo03g00743 Cmo-Chr3:6291134 1.30E-49 dispersed
Cmo18g01093 Cmo-Chr18:11430040 Cmo03g00743 Cmo-Chr3:6291134 8.26E-88 dispersed
Cmo20g00316 Cmo-Chr20:1544023 Cmo03g00743 Cmo-Chr3:6291134 2.07E-35 dispersed
Cmo04g00875 Cmo-Chr4:4386702 Cmo03g00743 Cmo-Chr3:6291134 6.42E-89 transposed
Cmo08g01253 Cmo-Chr8:7912858 Cmo03g00743 Cmo-Chr3:6291134 5.70E-90 transposed
Cmo19g00456 Cmo-Chr19:5523601 Cmo03g00743 Cmo-Chr3:6291134 5.71E-97 transposed
Cmo16g00691 Cmo-Chr16:3419492 Cmo03g00743 Cmo-Chr3:6291134 4.90E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00743 K00430 - csv:101204887 691.804