Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00782 ATGGCGAATATGTGTGCCGATAGCGGCAATCTTATGGCGATTGCTCAGCAAGTCATGAAGCAGAAGCAGCTACAAGAGCAGCAACAGCAGCAGCACCCACAGCAGTCGCCTCAGCAGCTCACTGGACCCTGTACTTTCGGTCTCAACCCATGGACTGCCTCGAACCATTCTCTGTCCGGTGCGCCAGATTTGGGATTTGGGCTCTCTGGAGCTGGATTTCCCGACCCGTTTCAGGTTCAGAGAGTAGTCGACGGTGGAGATACGAGCTTTCAGTTTCCCAATTTGGAGCACCATTCTTCTGCTTTCAGATTTACCGATTTCGACGGCGGCGCTGCGGCAGAGTTCGACTCCGATGAGTGGATGGACAGTCTAATAGTCGGTGGAGATTCAACGGAGAGCTCTAATCTTCCTTCTGGTTGCGAAGCGTGGCAGTCTAATTCGGATTTTGCTTTCTATGGTGCCGATCCCTTTATCCCCTGTCCCAGTCGCCTAACTATTCCCTGTTCTTCACCCTCTGATCTTAACAGAGTCATTTTCCCTGACCCTCCCAAAAGTCAAACCGCCGTTCAACCGCCGGTGGTCTCGTGGACGGGACTTACGTCGGCGACTCCGCCGGCGGTCCTCAAGGACACTCAAGTTCCCAACCCTCCCCTTATTGTTCACAAGAGTGAAGATAACGGCGGTTCGTCGAGTTCTGCAGAGACTGAATCGACTCCGCCGCTACTTAAAACCCTAATTGAATGTGCTCGACTTTCCGAATCGGAGCCAGATCGAGCGGCGCAAATGTTAATTCAGCTTAAGGAATCGTCATCGGAGCACGGAGATCCGACGGAGAGAGTCGCCTTTTACTTTCTCGAAGCTCTGTGCCGGAGATTGTCGCTTCGATCGGAGAATTGTTTGGTTTCTTGCGAATCCACTTCCGATGATTTCACTCTCTCTTATAAAGCTCTGAACGACGCTTGCCCGTATTCTAAATTCGCACATTTGACTGCGAATCAAGCCATACTCGAGATTACAGAGAACGCAAGCAGGATTCACATAATCGACTTCGGGATTTCACAGGGAGTTCAATGGGCGGCTCTTCTTCAAGCTCTCGCAACCCGCTCTACCGGAAAACCAACAGGAATTCGGATCTCTGGCATTCCGGCTCCGATGCTCGGGAACTGTCCGGCGACGGCGCTGTTCGCAACAGGTAACCGACTTGCCGAGTTCGCAAAGCTTCTGGAACTAAACTTCGAATTCGACCCAATTCTGACTCCAATCGAAGAACTGAACGAATCGTCGTTCCGAATCCAGTCGGAGGAATCCCTGGCCGTGAATTTCATGCTTCAATTATACAACCTCCTCGACGAAACTCCTCGCGCCGTTCTCAACGTTTTGAAACTGGCAAAATCGCTGAACCCTAAAATCGTGACCCTCGGCGAATACGAAGCCAGTCTAAACCGGGTCGGGTTCTTCACCCGGTTCACTAACGCACTGAGATATTACTCTGCCATTTTCGAATCACTGGACCCAAAATTACCTCGCGACTCAAACGAGAGGCTGCAACTGGAAAAGCTCGTGCTCGGGCGGCGAATCGTCGGCGTGGTGGGACCGGAGTCGTCGTCGGCGGCGGCGGCGGGAGGCAAAACGGAACGAATGGAAGAGAAAGAAGAGTGGAAAATGTTAATGGAAAACAGCGGATTTGAAGCAGTAAATCTGAGTCATTACGCGAGAAGCCAAGCTAAAATCCTTTTATGGAAGTACGATTACAGCTCTGAGTATTGTCTGATGGAATCCTCAGCTGGGTTCTTGTCGTTGGCATGGAAGGATGTCCCGATCATTACAGTTTCTTCGTGGCGTTGA 1845 51.33 MANMCADSGNLMAIAQQVMKQKQLQEQQQQQHPQQSPQQLTGPCTFGLNPWTASNHSLSGAPDLGFGLSGAGFPDPFQVQRVVDGGDTSFQFPNLEHHSSAFRFTDFDGGAAAEFDSDEWMDSLIVGGDSTESSNLPSGCEAWQSNSDFAFYGADPFIPCPSRLTIPCSSPSDLNRVIFPDPPKSQTAVQPPVVSWTGLTSATPPAVLKDTQVPNPPLIVHKSEDNGGSSSSAETESTPPLLKTLIECARLSESEPDRAAQMLIQLKESSSEHGDPTERVAFYFLEALCRRLSLRSENCLVSCESTSDDFTLSYKALNDACPYSKFAHLTANQAILEITENASRIHIIDFGISQGVQWAALLQALATRSTGKPTGIRISGIPAPMLGNCPATALFATGNRLAEFAKLLELNFEFDPILTPIEELNESSFRIQSEESLAVNFMLQLYNLLDETPRAVLNVLKLAKSLNPKIVTLGEYEASLNRVGFFTRFTNALRYYSAIFESLDPKLPRDSNERLQLEKLVLGRRIVGVVGPESSSAAAAGGKTERMEEKEEWKMLMENSGFEAVNLSHYARSQAKILLWKYDYSSEYCLMESSAGFLSLAWKDVPIITVSSWR 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6454476 6456320 - CmoCh03G007820.1 Cmo03g00782 378245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00782 614 MobiDBLite consensus disorder prediction 20 46 - -
Cmo03g00782 614 ProSiteProfiles GRAS family profile. 232 614 IPR005202 -
Cmo03g00782 614 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 242 613 - -
Cmo03g00782 614 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 242 613 IPR005202 -
Cmo03g00782 614 Pfam GRAS domain family 242 614 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00782 Cmo16g00713 CCT
Cmo03g00782 Cmo04g00840 CCT
Cmo03g00782 Cmo07g00492 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00782 Cmo-Chr3:6454476 Cmo04g00840 Cmo-Chr4:4192956 0 dispersed
Cmo03g00782 Cmo-Chr3:6454476 Cmo07g00492 Cmo-Chr7:2224850 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9411 PF03514 GRAS 6.40E-110 CL0063 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00782 - - cmos:111453531 1155.58