Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00804 ATGCATACATTGGCTAGAAGTGAGGTTGGAAATTTGCTTGATCAGTCAAACAGTGGTGTGGCTCACAATGCTGAAGTGCTTATTGGTCATAGCATCGTTCTTCCTCTCCTCCGCCTCTGCACAGCACAACGCCCCCCAGAAACATCAATGGCTCACCTTGAGAGTTATGCAGGGGAAGAGCCAATAGTGATAGCAAGAGGAGGGCTATCTGGAGTGTTCCCAGAATCAAGCCCCTTTGCAAATCAAATGGCATTGGCTTCAGGTTTACATAACAAAACTGTGTTGTACTGCAACCTCCAGCTGACCAAAGATGGGATAGGCCTTTGCTTAACTGATCTCAGGCTTCAAAACTCGACCAACATTGAAGACATCTTCCCACAGCCTCATAAGCATTACAACGTTAATGGAAAGATCATCAGTGGATTGTTTTCTGTTGATTTCATGTCTGAGGATCTCTTTAACAGAGTCGACATGATTCAAAATATCTTCTCCCGACCTAGTGTCTATGATGGTACTTGGCCAGTAGCTGCTGTTGAAGACGTCGTTCGGATTAAACCATCCCGGTTTTGGTTGAACGTCGAGTATGAAGCATTCTATGCAGAACATAATCTGAGTGTCTCATCATACCTTCAAAAGGCATTGAGATTGATGGCTATAAACTATGTGTCATCTTCTGAGATTGGGTTGTTGAGAGGGCTAAGTGGGAGTGTGAACAAAGGCAGAACAAAGCTGATCTTCCGGTTCTTAGAAGCCAATGAAACAGAGCCAACAACAAAGAAAACATACGGTGCATTGGCTCAAGAACTGGCCATGTTCAAGTCATTTGCCTCGGGAATTCTCATCAGAAAAGAATACATTTGGCCAATTGGTCCAGACAAGTACGTGCAGCCTGCAACAAGCCTTGTCATGGATGCCCATAAGCTTGGCTTGGAAGTTTATGCTTCTGGCTTTGCTAATGATGCAATGGTTGGTTACAATTATAGTTATGATCCAATCCGTGAGTACCTTCAGTATGTGGATAATGGCCAATTTGCTGTTGATGGGGTCCTCTCTGATTTCTCTCCTACTGCTTCTCAAGCCATTGCCTGCTATTCGAGTTTTCAGAACAACGGCAAGGCTCAACCCGGAGTGAAGGAAGCATTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTTCCCAGGCTCGACTGACATTGCTTACCAAAGAGCAATTGATGATGGGGCTGACGTTATTGATTGTTCAGTTCAATTATCAAAAGATGGAGTAGCATTGTGCATGAACATGGCGGATCTGTTGACAACCACCACTGCTATCACCGCTTTCTCCGATCGAACTACAACCATCCCTGAACTTCAACCCCAAGTTGGAATCTTCTCTTTTGATCTTACTTGGGCTGAGATTCTTAGTCTCAAGCCTCAAATTACAAACCCTTTCATGGCCTCTTCTGGGCTTGCCCGTAATCCAGCGTTTAAGAACAAGGGCAACTTCGTGACCCTTCCTGACTTTCTGGAGTTCGCTAAAGCCAAAGCTGTTTCTGGAATTATGATCAACATCCAAAACGCAGCATACTTGGCTTCAAAGAAAGGTCTGGACATGGTGGGAAGCATAGCCACAGCCCTAAGCAATGCCACTTTTGACAAGCAATCAACACAACAAGTGTTCATCAGGTCAGACGACACTTCTGTGCTGTCCATTTTCAAGGCCAAGTTCCCAAAATTCATAAGAGTTTTAACGGTTGACTCCAAGATTGGTGATGCCCCAAACAATGCCCTTGAAGAGATCAAACGCTACGCCCAAGCTGTGGCCATTCCTCGTGCCTCTATCATTGAAGTAACCAACTACTTCACCACTGGCCTCACCAAAGTCGTCTCTGAAATGAAAGCTTCCAATCTCTCCATCCTTGTGTATGTCATGAGGAACGAATACGTCTCCTTGGCTTTTGATTACTATGCCCAGCCCTCCTTGGAGATCGCTACCTATGTCGACTACTTCCACGTCGACGGCGTCATAACTGAATTTCCTAAAACTGCAAAACAATATATGACATGTCCATGCCGACCTACTCAGCCCGACCTGAACGTAGCTCCATATATAATCTTGCCACCTGAAATTGGTTTGCTCATGAGTATGGTGCCTTCAGAGGCTAAACCACCTACCGATCCTCCATTGCCGCCATTGGATGCTGGAGATGTCGTCGACCCACCGCTCCCGCCGGTGACCGCTCCTTCCACCGGGCCTGCCGCGGCCACCCGATCAGCAGCTGTATCAAATGTTGCAAACTTGTATCTTTCTTTACTCTTAGTTGTTGTGGTCAGCTTCTTCCTTTCCCGCTCCACACCAATAATCAATACTTAA 2355 45.94 MHTLARSEVGNLLDQSNSGVAHNAEVLIGHSIVLPLLRLCTAQRPPETSMAHLESYAGEEPIVIARGGLSGVFPESSPFANQMALASGLHNKTVLYCNLQLTKDGIGLCLTDLRLQNSTNIEDIFPQPHKHYNVNGKIISGLFSVDFMSEDLFNRVDMIQNIFSRPSVYDGTWPVAAVEDVVRIKPSRFWLNVEYEAFYAEHNLSVSSYLQKALRLMAINYVSSSEIGLLRGLSGSVNKGRTKLIFRFLEANETEPTTKKTYGALAQELAMFKSFASGILIRKEYIWPIGPDKYVQPATSLVMDAHKLGLEVYASGFANDAMVGYNYSYDPIREYLQYVDNGQFAVDGVLSDFSPTASQAIACYSSFQNNGKAQPGVKEALVISSNGASGDFPGSTDIAYQRAIDDGADVIDCSVQLSKDGVALCMNMADLLTTTTAITAFSDRTTTIPELQPQVGIFSFDLTWAEILSLKPQITNPFMASSGLARNPAFKNKGNFVTLPDFLEFAKAKAVSGIMINIQNAAYLASKKGLDMVGSIATALSNATFDKQSTQQVFIRSDDTSVLSIFKAKFPKFIRVLTVDSKIGDAPNNALEEIKRYAQAVAIPRASIIEVTNYFTTGLTKVVSEMKASNLSILVYVMRNEYVSLAFDYYAQPSLEIATYVDYFHVDGVITEFPKTAKQYMTCPCRPTQPDLNVAPYIILPPEIGLLMSMVPSEAKPPTDPPLPPLDAGDVVDPPLPPVTAPSTGPAAATRSAAVSNVANLYLSLLLVVVVSFFLSRSTPIINT 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6521474 6526463 + CmoCh03G008040.1 Cmo03g00804 378267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00804 784 SUPERFAMILY PLC-like phosphodiesterases 61 360 IPR017946 GO:0006629|GO:0008081
Cmo03g00804 784 ProSiteProfiles GP-PDE domain profile. 61 361 IPR030395 GO:0006629|GO:0008081
Cmo03g00804 784 MobiDBLite consensus disorder prediction 715 742 - -
Cmo03g00804 784 Gene3D Phosphatidylinositol (PI) phosphodiesterase 59 361 IPR017946 GO:0006629|GO:0008081
Cmo03g00804 784 Gene3D Phosphatidylinositol (PI) phosphodiesterase 379 682 IPR017946 GO:0006629|GO:0008081
Cmo03g00804 784 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 36 772 - -
Cmo03g00804 784 Pfam Glycerophosphoryl diester phosphodiesterase family 386 676 IPR030395 GO:0006629|GO:0008081
Cmo03g00804 784 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL6-RELATED 36 772 - -
Cmo03g00804 784 CDD GDPD_SHV3_repeat_1 61 360 - -
Cmo03g00804 784 MobiDBLite consensus disorder prediction 713 747 - -
Cmo03g00804 784 ProSiteProfiles GP-PDE domain profile. 380 681 IPR030395 GO:0006629|GO:0008081
Cmo03g00804 784 CDD GDPD_SHV3_repeat_2 380 680 - -
Cmo03g00804 784 SUPERFAMILY PLC-like phosphodiesterases 381 681 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01146 Cmo-Chr1:9395372 Cmo03g00804 Cmo-Chr3:6521474 0 dispersed
Cmo03g00804 Cmo-Chr3:6521474 Cmo09g00981 Cmo-Chr9:5199176 0 dispersed
Cmo03g00804 Cmo-Chr3:6521474 Cmo07g00504 Cmo-Chr7:2290184 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00804 - - cpep:111803809 1431.77