Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00806 ATGACGGGCAGAGGGTCATCGGGAAGGACGCCGACGTGGAAGGAAAGGGAGAATAATAAGAGGAGGGAGAGGCGTCGGAGGGCCATTGCTGCTAAGATCTACACTGGTCTTAGAGCTCAGGGGAACTATAAGCTTCCTAAGCACTGTGACAACAACGAGGTCCTGAAAGCACTCTGTAACGAGGCTGGTTGGGTGGTTGAAGAAGATGGCACCACCTATCGCAAGGGAAGCAAGCCACCTCCGATTGATATTGGCACTTCTGCAAACATGAGTGCCTGTTCCTCTCTTCAACCAAGCCCACAATCTTCCTGCTTCCCGAGTCCTGTACCATCCTACCATGCCAGTCCTTCCTCGTCCTCTTTTCCCAGCCCAACTCGATTTGATGGGAATCCATCTTCTTATCTTCTGCCATTCCTTCAAAATATATCCTCTATACCTGCTAATCTCCCTCCTCTCAGAATATCAAACAGTGCACCTGTCACGCCGCCTCTCTCTTCCCCGACGTCAAGGGGTTCTAAGCGAAAACCAGACTGGGAGTCCATTCCAAATAGCTATGTAACCTCTTTCCGCCATCCATTCTTTGCTGTATCTGCTCCTTCAAGTCCAACAAGATGCCACCATCTTACACCGGCTACAATCCCAGAATGTGACGAGTCGGACGCTTCAACTGTGGACTCTGGTCGCTGGGTCAGCTTCCAGACTGTGGCACCTTCCGTGGCTCCTCCTTCCCCTACGTTTAATCTGATGAAACCAGTTAGTCAGCAAAACTCTCTCCATGATGCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTACCTCTGATAGGGGACGAGGCTCCGAGTTTGAATTTGAGAAATTTGAGAGTGGCGCAGTGAAGGCGTGGGAGGGTGAGAGAATTCATGAAGTTGGGGTGGACGACTTGGAGCTTACTCTTGGGGGTGGGAAGGCCCGTTGTTAA 960 51.35 MTGRGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGNYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGSKPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNISSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYVTSFRHPFFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAPSVAPPSPTFNLMKPVSQQNSLHDAVDRHGAMGWGATSDRGRGSEFEFEKFESGAVKAWEGERIHEVGVDDLELTLGGGKARC 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 6530547 6533260 - CmoCh03G008060.1 Cmo03g00806 378269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00806 319 MobiDBLite consensus disorder prediction 1 25 - -
Cmo03g00806 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 318 IPR033264 GO:0003700|GO:0006351|GO:0009742
Cmo03g00806 319 MobiDBLite consensus disorder prediction 155 179 - -
Cmo03g00806 319 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 129 IPR008540 -
Cmo03g00806 319 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 318 - -
Cmo03g00806 319 MobiDBLite consensus disorder prediction 155 171 - -
Cmo03g00806 319 MobiDBLite consensus disorder prediction 10 24 - -
Cmo03g00806 319 MobiDBLite consensus disorder prediction 87 109 - -
Cmo03g00806 319 MobiDBLite consensus disorder prediction 71 109 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00806 Cmo07g00506 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00806 Cmo-Chr3:6530547 Cmo05g00234 Cmo-Chr5:1002966 4.86E-90 dispersed
Cmo12g00435 Cmo-Chr12:2676074 Cmo03g00806 Cmo-Chr3:6530547 3.22E-85 wgd
Cmo03g00806 Cmo-Chr3:6530547 Cmo07g00506 Cmo-Chr7:2298841 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9416 PF05687 BES1_N 9.90E-64 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00806 K14503 - csv:101216171 564.688