Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g00964 | ATGGGTCGCTTCAACCTCCTCATTGCACTATCTCTTCTTTCTTTGTTCGTCTTTCCTTCTCCAACCCTCGCCCAACTCCGACAAAACTTCTACGCCAACATCTGCCCCAATGTCGAGAACATTGTCCGCTCCCAAGTTACCAAGAAATTTCAACAGACATTCGTCACTGTTCCCGCCACTCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCTGTGATTATTGCTTCCACTCCATCCAACAAGGCTGAGAAGGATCATCCCGACAACCTCTCGCTTGCCGGAGATGGATTTGATACCGTCATTAAGGCTAAAGCCGCCCTGGATGCCATCCCTCAATGTCGAAACAGAGTCTCCTGTGCCGATATTCTTGCTTTGGCCACTCGTGACGTCATCGCATTGTCCGGCGGACCGTCGTACGCGGTGGAGCTGGGAAGGTTAGACGGCCTGGTTTCAAGAGCCTCCGACGTGAACGGGAGACTGCCAGCACCGACCTTTAATCTCAATCAGCTCAATTCTCTGTTTGCTAAGAATGGGCTGACACAAGAGGACATGATCGCTCTCTCAGCGGCACACACCGTCGGATTCTCACACTGCGGGAAGTTCTCGAACCGAATTTACAGCTTTGCCCCTGGAAAGCCAGTGGACCCTTCCTTAAACAGAACATATGCAAACCAGCTACAACAGATGTGCCCGAAGAGTGTGGACCCCAGAGTGGCAATTAACATGGACCCAATCACGCCCAGAGCATTCGACAACATATACTTCAAAAATCTGCAGCAGGGAATGGGCCTATTCACCTCGGACCAGGTTTTATTCACCGACTCCAGGTCCAGGCCCACAGTGAATTCCTGGGCCAGCAACTCCCAGGCCTTTAATAAAGCCTTTGTTGCAGCCATGACCAAGTTGGGCCGGGTCGGCGTAAAGACCGGTAGAAACGGTAACATCCGGCGTGATTGCGGAGCCTTCAATTAA | 987 | 51.67 | MGRFNLLIALSLLSLFVFPSPTLAQLRQNFYANICPNVENIVRSQVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTPSNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRNRVSCADILALATRDVIALSGGPSYAVELGRLDGLVSRASDVNGRLPAPTFNLNQLNSLFAKNGLTQEDMIALSAAHTVGFSHCGKFSNRIYSFAPGKPVDPSLNRTYANQLQQMCPKSVDPRVAINMDPITPRAFDNIYFKNLQQGMGLFTSDQVLFTDSRSRPTVNSWASNSQAFNKAFVAAMTKLGRVGVKTGRNGNIRRDCGAFN | 328 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7235220 | 7237034 | - | CmoCh03G009640.1 | Cmo03g00964 | 378427 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g00964 | 328 | CDD | secretory_peroxidase | 25 | 327 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo03g00964 | 328 | PANTHER | - | 7 | 328 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PANTHER | PEROXIDASE | 7 | 328 | - | - | |
Cmo03g00964 | 328 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 328 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | Gene3D | Peroxidase, domain 2 | 166 | 307 | - | - | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 35 | 54 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 59 | 79 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 121 | 131 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 140 | 155 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 187 | 199 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 246 | 261 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 262 | 279 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Plant peroxidase signature | 302 | 315 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Haem peroxidase superfamily signature | 57 | 71 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Haem peroxidase superfamily signature | 122 | 139 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Haem peroxidase superfamily signature | 140 | 152 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Haem peroxidase superfamily signature | 188 | 203 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | PRINTS | Haem peroxidase superfamily signature | 248 | 263 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | Pfam | Peroxidase | 42 | 291 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | ProSiteProfiles | Plant heme peroxidase family profile. | 25 | 328 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g00964 | 328 | Gene3D | - | 29 | 328 | - | - | |
Cmo03g00964 | 328 | ProSitePatterns | Peroxidases active site signature. | 57 | 68 | IPR019794 | GO:0004601 | |
Cmo03g00964 | 328 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 188 | 198 | IPR019793 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo03g00964 | Cmo20g01019 | CCT | |
Cmo03g00964 | Cmo07g00671 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g00964 | Cmo-Chr3:7235220 | Cmo07g01136 | Cmo-Chr7:6028779 | 0 | dispersed | |
Cmo01g01613 | Cmo-Chr1:12314623 | Cmo03g00964 | Cmo-Chr3:7235220 | 2.36E-148 | transposed | |
Cmo03g00964 | Cmo-Chr3:7235220 | Cmo07g00671 | Cmo-Chr7:3025898 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g00964 | K00430 | - | csv:101206860 | 603.208 |