Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00964 ATGGGTCGCTTCAACCTCCTCATTGCACTATCTCTTCTTTCTTTGTTCGTCTTTCCTTCTCCAACCCTCGCCCAACTCCGACAAAACTTCTACGCCAACATCTGCCCCAATGTCGAGAACATTGTCCGCTCCCAAGTTACCAAGAAATTTCAACAGACATTCGTCACTGTTCCCGCCACTCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCCTCTGTGATTATTGCTTCCACTCCATCCAACAAGGCTGAGAAGGATCATCCCGACAACCTCTCGCTTGCCGGAGATGGATTTGATACCGTCATTAAGGCTAAAGCCGCCCTGGATGCCATCCCTCAATGTCGAAACAGAGTCTCCTGTGCCGATATTCTTGCTTTGGCCACTCGTGACGTCATCGCATTGTCCGGCGGACCGTCGTACGCGGTGGAGCTGGGAAGGTTAGACGGCCTGGTTTCAAGAGCCTCCGACGTGAACGGGAGACTGCCAGCACCGACCTTTAATCTCAATCAGCTCAATTCTCTGTTTGCTAAGAATGGGCTGACACAAGAGGACATGATCGCTCTCTCAGCGGCACACACCGTCGGATTCTCACACTGCGGGAAGTTCTCGAACCGAATTTACAGCTTTGCCCCTGGAAAGCCAGTGGACCCTTCCTTAAACAGAACATATGCAAACCAGCTACAACAGATGTGCCCGAAGAGTGTGGACCCCAGAGTGGCAATTAACATGGACCCAATCACGCCCAGAGCATTCGACAACATATACTTCAAAAATCTGCAGCAGGGAATGGGCCTATTCACCTCGGACCAGGTTTTATTCACCGACTCCAGGTCCAGGCCCACAGTGAATTCCTGGGCCAGCAACTCCCAGGCCTTTAATAAAGCCTTTGTTGCAGCCATGACCAAGTTGGGCCGGGTCGGCGTAAAGACCGGTAGAAACGGTAACATCCGGCGTGATTGCGGAGCCTTCAATTAA 987 51.67 MGRFNLLIALSLLSLFVFPSPTLAQLRQNFYANICPNVENIVRSQVTKKFQQTFVTVPATLRLFFHDCFVQGCDASVIIASTPSNKAEKDHPDNLSLAGDGFDTVIKAKAALDAIPQCRNRVSCADILALATRDVIALSGGPSYAVELGRLDGLVSRASDVNGRLPAPTFNLNQLNSLFAKNGLTQEDMIALSAAHTVGFSHCGKFSNRIYSFAPGKPVDPSLNRTYANQLQQMCPKSVDPRVAINMDPITPRAFDNIYFKNLQQGMGLFTSDQVLFTDSRSRPTVNSWASNSQAFNKAFVAAMTKLGRVGVKTGRNGNIRRDCGAFN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7235220 7237034 - CmoCh03G009640.1 Cmo03g00964 378427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00964 328 CDD secretory_peroxidase 25 327 IPR033905 GO:0004601|GO:0042744
Cmo03g00964 328 PANTHER - 7 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PANTHER PEROXIDASE 7 328 - -
Cmo03g00964 328 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 Gene3D Peroxidase, domain 2 166 307 - -
Cmo03g00964 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 Pfam Peroxidase 42 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g00964 328 Gene3D - 29 328 - -
Cmo03g00964 328 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cmo03g00964 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00964 Cmo20g01019 CCT
Cmo03g00964 Cmo07g00671 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00964 Cmo-Chr3:7235220 Cmo07g01136 Cmo-Chr7:6028779 0 dispersed
Cmo01g01613 Cmo-Chr1:12314623 Cmo03g00964 Cmo-Chr3:7235220 2.36E-148 transposed
Cmo03g00964 Cmo-Chr3:7235220 Cmo07g00671 Cmo-Chr7:3025898 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00964 K00430 - csv:101206860 603.208