Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00970 ATGGTCCTCTTCCGTTTTGGCTCCACTCCGCGCAATTATTCACTCACTCAACAACACAACCACTCCCCACCCCCCACTCTCTCTGAGAAAATGGTGAAGCCGGTTTGGATTTTTCTACTTTTCTGTTTCTTCTCTGGGCCGTTCATGGCTGCTGCTGTTGCTGCACAGAAGAAGACTTACGTCGTGCACATGGCCAAGTACCAAATGCCCCAGACTTTTGAGCACCACTTGCACTGGTACGACGCGTCGCTCAAATCGGTGTCCGACACGGCCGATATGATCTATGCTTACAAAACCGTCGTTCATGGGTTTTCAACCAGATTGACGGCGGAGGAAGCTCAGCGACTGGAGGCCCAACCTGGGGTTCTGGCTGTGGTGCCGGAGATGAGATATGAACTTCACACCACTCGTACTCCTCAGTTTCTTGGACTTGACAAGAATGCAGATCTGTACCCTGAATCAACCTCCACATCGGAGGTTATCATCGGAGTTTTGGATACTGGGGTTTGGCCGGAGAGTAAGAGCTTTGACGATTCTGGGCTCGGACCGGTGCCGAGTAGCTGGAAAGGAGAGTGTGAATCAGGTACCAATTTCAGTGCGTCGAACTGCAACAGGAAGCTGATTGGAGCCAGATTTTTCTCCAAGGGCTACGAGGCGACTCTCGGTCCGATCGACGAATCGAAAGAATCGAGATCTCCGAGAGATGATGACGGACATGGAACCCACACCGCTACCACCGCCGCTGGTTCTGTGGTTGAAAACGCGAGCCTATTTGGCTACGCGTCCGGCACCGCCCGTGGGATGGCCGCACGTGCGAGGGTTGCCGCCTACAAGGTCTGCTGGGCCGGCGGATGTTTCAGCTCCGATATTTTAGCTGCCATTGAAAAGGCTGTGGAGGACAATGTTAATGTCCTTTCCATGTCGCTCGGCGGCGGAATATCTGACTATTACAAAGACAGCGTCGCCTCGGGAGCTTTCGCCGCCATGGAGAAAGGCATCCTCATTTCTTGCTCTGCTGGGAATGCCGGCCCCAGCCCTTACAGCTTGTCAAATACGTCTCCATGGATAACAACCGTCGGCGCTGGAACATTAGATCGCGATTTCCCGGCGTACGTCAGTATCGGCGACGGCAAGAACTTCTCCGGCGTTTCGCTCTATCGAGGCAAGTCATTGCCGGGAACGTTGTTGCCTTTTATTTACGCTGCTAATGCGAGTAACTCTGCCAATGGAAATTTGTGTATGACCGGTACTTTGATCCCCGAAAAAGTGGCCGGAAAGGTCGTGTTCTGTGACCGGGGTGTAAACCCTAGGGTTCAGAAAGGGGCGGTGGTCAAAGCCGCTGGTGGAATCGGAATGGTGTTGGCCAATACCGCCGCGAATGGAGAAGAGCTGGTGGCCGACTCTCATCTTCTACCCGCCTCGGCGGTGGGTCAGAAATCCGGTGACATTATACGGAAGTATCTCATTTCGGACCCAAAGCCGACAGTGACGATCTTATTCGAAGGGACGAAATTGGGGATCGAACCGTCTCCGGTGGTGGCAGCGTTTAGCTCCCGAGGACCAAATTCTATCACTCCTCAGGTGCTGAAGCCCGACATAATCGCCCCTGGCGTCAACATCTTGGCTGGATGGTCAAAAGCAGTGGGACCGAGTGGTTTACCCATTGATGAAAGACGAGTGGATTTCAACATTATCTCTGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCCGCTCTAATCAAGGGCGCTCATCTCGACTGGAGTCCGGCGGCGATTCGATCGGCGTTGATGACAACAGCCTACACAGCTTACAAAAACGGCCAAAAGATCCAAGACATCGCCACCGGAAAACCATCCACCCCATTCGATCACGGTGCCGGACACGTCGATCCCGTATCAGCCCTCAATCCGGGTCTTGTATACGATCTAACGGTGGACGATTACCTGGACTTCCTCTGCGCACTCAACTACACTTCGTCGCAGATCAACTCCCTGGCGAGGAGAGATTACACTTGCGACTCGGGGAAGAAGTACAGTGTCAACAATCTCAACTACCCTTCATTCGCCGTCGTTTTCGACGGCGTATTGGGCGGCGGAAGCAGTGGTTCCAGTGTAGTGAAGCACACCAGAACTCTTACAAACGTCGGCTCCCCAGGAACTTACAAAGTCTCAATCTCGTCGGAGACCAAGCTGGTGAAAATCTCCGTCGAGCCGGAATCATTGAGCTTCACCAAAGCCAATGAGAAGAAGTCATACACAGTCACATTCACAACCACGACTGGTTCATCTGCACCGCCGAGCGCTGAAGGGTTCGGTCGAATTGAATGGACGGACGGGAAGCACGTTGTGGGAAGTCCGATTGCGTTTAGTTGGACGTAG 2385 53.46 MVLFRFGSTPRNYSLTQQHNHSPPPTLSEKMVKPVWIFLLFCFFSGPFMAAAVAAQKKTYVVHMAKYQMPQTFEHHLHWYDASLKSVSDTADMIYAYKTVVHGFSTRLTAEEAQRLEAQPGVLAVVPEMRYELHTTRTPQFLGLDKNADLYPESTSTSEVIIGVLDTGVWPESKSFDDSGLGPVPSSWKGECESGTNFSASNCNRKLIGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWAGGCFSSDILAAIEKAVEDNVNVLSMSLGGGISDYYKDSVASGAFAAMEKGILISCSAGNAGPSPYSLSNTSPWITTVGAGTLDRDFPAYVSIGDGKNFSGVSLYRGKSLPGTLLPFIYAANASNSANGNLCMTGTLIPEKVAGKVVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPASAVGQKSGDIIRKYLISDPKPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQVLKPDIIAPGVNILAGWSKAVGPSGLPIDERRVDFNIISGTSMSCPHVSGLAALIKGAHLDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTPFDHGAGHVDPVSALNPGLVYDLTVDDYLDFLCALNYTSSQINSLARRDYTCDSGKKYSVNNLNYPSFAVVFDGVLGGGSSGSSVVKHTRTLTNVGSPGTYKVSISSETKLVKISVEPESLSFTKANEKKSYTVTFTTTTGSSAPPSAEGFGRIEWTDGKHVVGSPIAFSWT 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7281657 7285943 + CmoCh03G009700.1 Cmo03g00970 378433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00970 794 Pfam Peptidase inhibitor I9 59 134 IPR010259 -
Cmo03g00970 794 CDD PA_subtilisin_like 371 498 - -
Cmo03g00970 794 Gene3D - 654 793 - -
Cmo03g00970 794 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 47 792 IPR045051 -
Cmo03g00970 794 Gene3D Peptidase S8/S53 domain 160 650 IPR036852 GO:0004252|GO:0006508
Cmo03g00970 794 PRINTS Subtilisin serine protease family (S8) signature 235 248 IPR015500 -
Cmo03g00970 794 PRINTS Subtilisin serine protease family (S8) signature 157 176 IPR015500 -
Cmo03g00970 794 PRINTS Subtilisin serine protease family (S8) signature 566 582 IPR015500 -
Cmo03g00970 794 Pfam Fibronectin type-III domain 684 790 IPR041469 -
Cmo03g00970 794 Pfam PA domain 412 483 IPR003137 -
Cmo03g00970 794 ProSitePatterns Serine proteases, subtilase family, serine active site. 567 577 IPR023828 -
Cmo03g00970 794 ProSiteProfiles Serine proteases, subtilase domain profile. 130 637 - -
Cmo03g00970 794 CDD Peptidases_S8_3 131 603 IPR034197 -
Cmo03g00970 794 MobiDBLite consensus disorder prediction 223 241 - -
Cmo03g00970 794 Pfam Subtilase family 158 607 IPR000209 GO:0006508|GO:0008236
Cmo03g00970 794 MobiDBLite consensus disorder prediction 223 246 - -
Cmo03g00970 794 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 47 792 - -
Cmo03g00970 794 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 47 134 IPR037045 -
Cmo03g00970 794 Gene3D - 365 506 - -
Cmo03g00970 794 SUPERFAMILY Subtilisin-like 133 641 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00970 Cmo-Chr3:7281657 Cmo05g00151 Cmo-Chr5:663324 0 dispersed
Cmo12g00526 Cmo-Chr12:3224994 Cmo03g00970 Cmo-Chr3:7281657 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00970 - - csv:101209691 1320.06