Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00973 ATGGATTTACACACTTTCCTCTACTCTTTCTTCTCCATTCTGTTTCTTCTTTTTGCTTTCAACCTCATCACTCGATCTCTTCGACTTCGCAAAAACTTACCGCCGAGTCCGCCATCTCTTCCGGTTATTGGCCATCTTCATCTCTTGAAAAAGCCACTCCATCGAAATTTCCAGAATCTCTCCGCCAAATATGGTCCTGTTATGTCTCTCCGCCTCGGATCTAACCTCGCTGTCGTTGTATCTTCGTCGTCAGCGGTGGAGGAGTGTTTCACTAAAAACGATGTCGTTCTTGCCAACCGTCCTCGTTTGCTAATTGGAAAATACCTCGGCTACAACTACACTACCATGATTGGGGCTTCATACGGTGATCACTGGCGGAACCTCCGCCGAATTGGCGCCATCGAGATTTTCTCTTCATCTCGAATCAACAAATTCGCCGATATCCGGAGGGATGAAGTGAAACGATTAGTGCGGAAACTGTCGCGCAATTCGATCCATCAATATTCGAAGGTAGAAATGCAATCGGCGTTGTCGGAGATGACGTTCAACATCTCGATGAGAATGGCGGCCGGGAAGAGGTATTACGGCGAGGACGTGACGGACAAGGAAGAGGCGAGGAGGTTCAGGGAGTTGATTAAGGAGATTGTGGCGGCAGGAGGAGTATCAAATCCAGGGGATTTTTTCCCCATTCTGAACTGGATCTCGAAGGGATTCGAGAGGAAATTGTTTGAATTGGGGAAGAAAGTGGATGCGTTCTTGCAGGGGCTCATCGATGACCACCGCAGGAAGAAGGAAGAAGGAAGGAACACGATGATCGATCACTTGCTCTCTCTGCAGGAATCGCAACCGGCTGTCTATGACGATCAAATAATCAAAGGATTTATACTGGTGTTACTGACTGCGGGAACCGACACATCGGCCGTGACAGTTGAATGGGCCTTGTGTCATCTATTGAACAATCCTGAAGTGTTAAAGAAGGCAAGAGACGAAATAGACACTCAAATTGGACAAGAACGCCTAGTTGAAGAACCGGACGTGTCCAAACTACCATATCTTCAAGGAATCATCTCTGAGACTCTGCGGCTGACTCCCGCAGCTCCAATGTTGTTGCCCCATTATGCAGCCAATGACTGCACAATACATGGATACGACGTGCCACGTGACACGATGCTGCTAGTCAATGCATGGGCCATACATAGGGATCCAAACGAATGGGAGGATCCCTTAAGTTTCAAACCCGAGCGATACGAAAAGTCAGAAGTCGAGGTACACAAGCTGTTGTCCTTCGGACTAGGAAGGCGAGCTTGTCCTGGGTCTGCCATGGCGCATAGGATAATGGGTCTAACTTTGGGGGCTCTGATTCAGTGCTTCGAGTGGGAGAAAATTGGAGCAGAAGACTTGGACATGAACGAGAGGGTAGGTGCCACAATGACGAAGATGGTGCCGTTGGAGGCCATGTGCAGAGCTCGTCCCACCGTGGATAACCTTCTTGACTGA 1497 48.83 MDLHTFLYSFFSILFLLFAFNLITRSLRLRKNLPPSPPSLPVIGHLHLLKKPLHRNFQNLSAKYGPVMSLRLGSNLAVVVSSSSAVEECFTKNDVVLANRPRLLIGKYLGYNYTTMIGASYGDHWRNLRRIGAIEIFSSSRINKFADIRRDEVKRLVRKLSRNSIHQYSKVEMQSALSEMTFNISMRMAAGKRYYGEDVTDKEEARRFRELIKEIVAAGGVSNPGDFFPILNWISKGFERKLFELGKKVDAFLQGLIDDHRRKKEEGRNTMIDHLLSLQESQPAVYDDQIIKGFILVLLTAGTDTSAVTVEWALCHLLNNPEVLKKARDEIDTQIGQERLVEEPDVSKLPYLQGIISETLRLTPAAPMLLPHYAANDCTIHGYDVPRDTMLLVNAWAIHRDPNEWEDPLSFKPERYEKSEVEVHKLLSFGLGRRACPGSAMAHRIMGLTLGALIQCFEWEKIGAEDLDMNERVGATMTKMVPLEAMCRARPTVDNLLD 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7332351 7334164 + CmoCh03G009730.1 Cmo03g00973 378436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00973 498 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 Gene3D Cytochrome P450 20 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 494 - -
Cmo03g00973 498 SUPERFAMILY Cytochrome P450 34 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 Pfam Cytochrome P450 34 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00973 498 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 494 - -
Cmo03g00973 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00973 Cmo20g00990 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00973 Cmo-Chr3:7332351 Cmo20g00988 Cmo-Chr20:5633295 0 dispersed
Cmo09g00263 Cmo-Chr9:1165145 Cmo03g00973 Cmo-Chr3:7332351 6.19E-13 dispersed
Cmo03g00973 Cmo-Chr3:7332351 Cmo03g00974 Cmo-Chr3:7335718 1.42E-83 tandem
Cmo02g00516 Cmo-Chr2:2868811 Cmo03g00973 Cmo-Chr3:7332351 0 transposed
Cmo01g01858 Cmo-Chr1:13506228 Cmo03g00973 Cmo-Chr3:7332351 7.08E-151 wgd
Cmo03g00973 Cmo-Chr3:7332351 Cmo09g00261 Cmo-Chr9:1159525 3.42E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00973 K13260 - csv:101215449 832.402