Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00974 ATGGAAGATCGCTCGCTGCTTTACCTTTTGCTCTCCCTTATCTTTCTCCTCTTTGCTCTCAGTCCCCGCCGACGCAGAAACTTACCGCCCGGTCCGCCGTCTCTTCCCATCATCGGTCACCTCCATTATCTCAAAGTCCCCGTCCACCGAACTTTACAGAAGCTCTCTGCAAAATATGGACCCGTAATCTCTCTCTGGTTCGGATCTCGTCTCGTGGTGGTCGTCTCATCATCGGCGGTGGTGGAGGAGTGCTTCACTAAGAACGACGTCGTTCTTGCCAACCGTCCTAGGTTGCTAGTCGGCAAACATGTCGGCTACAACTACACTACGATGGTGGCATCACCGTACGGCGATCACTGGCGGAACCTCCGCCGAATCGGCGCGATCGAGATCTTTTCGGCTTCTCGCCTGAACAAATTCGCCGGGATTCGGAGGGACGAAGTGGAACGGTTACTGAGAAAGCTATCGAAGAATTCGCTCCATGGATTCTCGAAGGTACAGATGCAATCGACGATTTCGGAACTGACGTTCAACATCTCGATGAGAATGGCGGCCGGAAAGAGATATTTCGGTGATGACGTGGCGGACGAGGACGAGGCGAGGCAGTTCAGAGAGTTGATTAAACAGATTGTATCGTTGGGAGGAGTTTCGAATCCGGGAGACTTCATTCCGATGCTGAATTGGATTCCGAATGTCTTCGAGAGGAAGGTTTCGAGACTTGCGAAGAGGACGGACGCGTTCTTGCAGGGACTGATCGACGAGCATCGGAGCAACAAGGAAGAAGAAAGGAACACGATGATCGATCACTTGCTGTCTCTGCAACAATCGGAGCCTGAATTATATGGAGATCAAATCATCAAAGGAATTATTCTGGTGTTGCTGTTAGCAGGGACGGATACATCAGCTGTAACGATGGAATGGGCCCTATCTCACTTGCTCAACAATCCGGAGATACTGAAGAAGGCTAGAGAGGAGTTGGACGCTCAAATTGGACAAGAACGACTAGTTGAAGAATCAGATGTGCCCAAGTTACCGTATCTTCAAGGAATCATCTCCGAGACTCTTAGGCTGACCCCAGCTGCTCCGTTGTTAGTGCCGCATCTCACCTCCGACGATTGCACAATAAGCAACTACAAAGTACCACGTGACACAATTGTGTTGGTTAATGCGTGGGCCATCCATAGAGATCCTAGTCAGTGGGAAGATCCCACGCGATTCAATCCCGAAAGACACCGAAAGTCAGAAGGTGATCACGCGCACAAGTTCCTTCCATTCGGAATCGGACGACGATCGTGCCCTGGGTCGGGCATGGCGCAACGAGTGGTGGGGTTGGCCCTGGCGGCGATGATTCAATGTTACGAGTGGGAGAGGATTGGCGAAGAGAAAGTGGATATGGCGGAGGGAAGAGGTATCACCATGCCCAAGAAACTTACCGCCTACTCCGCCGTCCCTGTCCACCGAACTTTCCAGAACCTCTCTGCAAAATACGGACCAGTTTTCTCTCTCTGGTTAGGCTCTCGCCTCGTGGTGGTCGTCTCATCGTCGGAGGCTGTTGAGGAGTGCTTCACTAAGAACGACGTTGTTCTGGCCAACCGTCCTAAATTTCTAATCGGCAAACTCGTCGCCTACAACTGTACTACGGTGGTCGGGTCGCCGTATGGCGACCACTGGCGCAACCTCCGCCGAATCGGCGCAATGGAGATATTTTCAGCGTCTCGTCTCAACCAATTCGCTGGGATCCGGATGGAGGAACTGCAACGGTTACTAAGAAAGCTATCGAGGAATTCGTTCCGTGGATTCTCGAAGGTAGACATGCAATCTCTGATTTCGGAACTTACGTTCAATATCTCGATGAGAATCGCGGCTGGAAAGAGGTACTTCGGTTCCGATGTGACGGACGAGGAGGAGGCGAGGCAGTTCAGAGAAATGATTAAACAGGCTGCGTCCGTGGCAGGCGTATGGTATCCAGGAGATTTTATTCCGATTCTGAATTGGATTTCGAAGGCGTTCGACTGA 2016 51.64 MEDRSLLYLLLSLIFLLFALSPRRRRNLPPGPPSLPIIGHLHYLKVPVHRTLQKLSAKYGPVISLWFGSRLVVVVSSSAVVEECFTKNDVVLANRPRLLVGKHVGYNYTTMVASPYGDHWRNLRRIGAIEIFSASRLNKFAGIRRDEVERLLRKLSKNSLHGFSKVQMQSTISELTFNISMRMAAGKRYFGDDVADEDEARQFRELIKQIVSLGGVSNPGDFIPMLNWIPNVFERKVSRLAKRTDAFLQGLIDEHRSNKEEERNTMIDHLLSLQQSEPELYGDQIIKGIILVLLLAGTDTSAVTMEWALSHLLNNPEILKKAREELDAQIGQERLVEESDVPKLPYLQGIISETLRLTPAAPLLVPHLTSDDCTISNYKVPRDTIVLVNAWAIHRDPSQWEDPTRFNPERHRKSEGDHAHKFLPFGIGRRSCPGSGMAQRVVGLALAAMIQCYEWERIGEEKVDMAEGRGITMPKKLTAYSAVPVHRTFQNLSAKYGPVFSLWLGSRLVVVVSSSEAVEECFTKNDVVLANRPKFLIGKLVAYNCTTVVGSPYGDHWRNLRRIGAMEIFSASRLNQFAGIRMEELQRLLRKLSRNSFRGFSKVDMQSLISELTFNISMRIAAGKRYFGSDVTDEEEARQFREMIKQAASVAGVWYPGDFIPILNWISKAFD 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7335718 7339306 + CmoCh03G009740.1 Cmo03g00974 378437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00974 671 Gene3D Cytochrome P450 481 670 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 Pfam Cytochrome P450 29 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 Pfam Cytochrome P450 485 666 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 SUPERFAMILY Cytochrome P450 29 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS P450 superfamily signature 423 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS P450 superfamily signature 432 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 484 667 - -
Cmo03g00974 671 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 481 - -
Cmo03g00974 671 Gene3D Cytochrome P450 18 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 425 434 IPR017972 GO:0005506|GO:0016705
Cmo03g00974 671 SUPERFAMILY Cytochrome P450 483 666 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 432 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 422 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g00974 671 Coils Coil 575 595 - -
Cmo03g00974 671 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 484 667 - -
Cmo03g00974 671 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 7 481 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00974 Cmo-Chr3:7335718 Cmo20g00988 Cmo-Chr20:5633295 2.51E-58 dispersed
Cmo09g00267 Cmo-Chr9:1177192 Cmo03g00974 Cmo-Chr3:7335718 9.21E-43 dispersed
Cmo20g00990 Cmo-Chr20:5647937 Cmo03g00974 Cmo-Chr3:7335718 6.07E-46 dispersed
Cmo03g00973 Cmo-Chr3:7332351 Cmo03g00974 Cmo-Chr3:7335718 1.42E-83 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00974 K13260 - csv:101211829 790.03