Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g00983 ATGATTCCCAACCCACCCACATTCCTCACAACCTTTCCACTTCTCTGTTGTGTTGTGCTGTGTTCTCTCTCCGCCTTTTCCGCCTCAGGATTTGCCTTTCAAATTCCGCCGCCTGCGCTTGTCCCACCGGAAGAATTGCGGTTGCCTTCCGACGCTGTTTCTCTTCTGTCCTTCAAGTCCAAAGCCGACTTGGACAACAAGCTTCTATACACTCTCAATGAGCGCTTTGATTACTGTCAATGGCAGGGCGTGAAGTGCGTCCAGGGTCGTGTTGTTAGACTGGTTCTTCAATCGTTTGGTCTCCGAGGGACATTGGCTCCAAATACAGTGTCTCAGCTCGACCAGCTTCGGATCCTCAGCCTGCATAACAACTCCCTCGAGGGGCCCATTCCTGACCTATTCGGACTCTTCAACCTTAAATCTCTCTTCCTCGGCCGAAACTCCTTTGTTGGGTCTTTTCCGCCGTCGATTCTCACTCTTCACCGGCTTCAGACTCTCGACCTTTCCTATAACAACTTCACGGGTCCGCTTCCGGTGAGGCTTTCCTCCTTGGACCGGCTCATTTCTCTCCGGCTTGAATGGAATGGTTTCAATGGAAGTATTCCTCCATTAAACCAGTCCTTCCTTGAGGTCTTCAATGTCGCGGGGAATAACCTGACCGGGCAAATTCCAGTTACCCCCACACTGTCGCGTTTCAACACGTCGTCGTTTTTCTGGAACCCAGATCTCTGCGGTGAGATCGTCAACAAGGCATGCCATTCACGCGCTCCATTCTTTGAAGCTTCCAATGCTACTCCACCATCTCTCCCTTCCGTCCAAAGCGCACAGTCACAGGACATACTTCTCTCTCCGGTCTCTCATGTTAAGCACAAGGAAACCGGTCTGATTGTGGGACTTTCAGTCGGCGCCGCAGTTTTAATAGCAGGTCTTTTATGTTTCTATGTAGCTGCCAGAACCCAAAAAAAAACCGCGTCGAAGCCGGAAATTCCGCCTTTCGAAACCGACACTGCGTTTTCCACTGCTTCCGCAATCAACGGCCGAGGCGACGGAAAGGGCGAGCTTCAAGCCAAAATGAAAGAAATTGAAGATATACCTAAAGTCCAGAAGAGTGGTAGTCTTATATTTTGTGAAGGGGAGGCAGAGTTGTTCAGCTTAGAGCAGTTAATGAGGGCTTCGGCCGAGCTGCTCGGTAGAGGCACAATGGGAACTACATACAAAGCAGTACTCTGCAACCAGCTAATCGTAACGGTGAAGCGTCTTGATGCTACTAAGACCGCCGCGACGAGCAGCGAAGTTTTCGACCGGCATTTGGAAGCAGTAGGTGCGCTTCGTCACCCCAATTTGGTTCCAGTTAGGGCCTATTTCCAAGCCAGGGGAGAGAGATTAGTGGTCTACGATTACCAACCTAATGGCAGTCTTTACAACCTCATTCACGGTTCAAGATCAGCAAGGGCTAAGCCTCTGCACTGGACATCATGCTTAAAGATTGCAGAAGATTTAGCTCAGGGAATTGCTTATATACATCAAGCTTCTAAGTTAATCCATGGCAACTTAAAGTCTACTAATGTCCTCCTTGGAGCAGAGTTTGAGGCCTGTCTCACAGACTATGGGCTTTCTGCTCTGGCTGAGTGTTGTGAAGATCCTGATGGTTCACGCTACCAAGCCCCTGAAACTCGCAAGTCCAGCCGGAATGCCACCCACAAGAGCGATGTGTATGCCTTCGGCGTGCTCTTGCTGGAGCTTTTGACAGGAAGACATCCAGCACAGCACCCATTTCTTGAGCCAACTGATATGTTAGAATGGGTAAGGATAGTTAGGGAGGATGATGGTGGGGATAGTAACCAACTTGGAATGCTTACTGAGGTGGCTAGCATCTGTAGTACTACATCCCCTGAACAGAGGCCGGCCATGTGGCAAGTTTTGAAAATGATTCTAGAAATCAAGGAGAGTGTCATGACAGAGGACAGTGAATCTAGTGGCTTTTAA 1986 49.55 MIPNPPTFLTTFPLLCCVVLCSLSAFSASGFAFQIPPPALVPPEELRLPSDAVSLLSFKSKADLDNKLLYTLNERFDYCQWQGVKCVQGRVVRLVLQSFGLRGTLAPNTVSQLDQLRILSLHNNSLEGPIPDLFGLFNLKSLFLGRNSFVGSFPPSILTLHRLQTLDLSYNNFTGPLPVRLSSLDRLISLRLEWNGFNGSIPPLNQSFLEVFNVAGNNLTGQIPVTPTLSRFNTSSFFWNPDLCGEIVNKACHSRAPFFEASNATPPSLPSVQSAQSQDILLSPVSHVKHKETGLIVGLSVGAAVLIAGLLCFYVAARTQKKTASKPEIPPFETDTAFSTASAINGRGDGKGELQAKMKEIEDIPKVQKSGSLIFCEGEAELFSLEQLMRASAELLGRGTMGTTYKAVLCNQLIVTVKRLDATKTAATSSEVFDRHLEAVGALRHPNLVPVRAYFQARGERLVVYDYQPNGSLYNLIHGSRSARAKPLHWTSCLKIAEDLAQGIAYIHQASKLIHGNLKSTNVLLGAEFEACLTDYGLSALAECCEDPDGSRYQAPETRKSSRNATHKSDVYAFGVLLLELLTGRHPAQHPFLEPTDMLEWVRIVREDDGGDSNQLGMLTEVASICSTTSPEQRPAMWQVLKMILEIKESVMTEDSESSGF 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 7402802 7406096 + CmoCh03G009830.1 Cmo03g00983 378446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g00983 661 Pfam Protein kinase domain 393 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g00983 661 SUPERFAMILY Protein kinase-like (PK-like) 394 648 IPR011009 -
Cmo03g00983 661 Gene3D Transferase(Phosphotransferase) domain 1 469 659 - -
Cmo03g00983 661 Gene3D Ribonuclease Inhibitor 49 206 IPR032675 -
Cmo03g00983 661 SUPERFAMILY L domain-like 50 245 - -
Cmo03g00983 661 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 19 657 - -
Cmo03g00983 661 ProSiteProfiles Protein kinase domain profile. 390 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g00983 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 657 - -
Cmo03g00983 661 Gene3D Ribonuclease Inhibitor 207 252 IPR032675 -
Cmo03g00983 661 Gene3D Phosphorylase Kinase; domain 1 357 467 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00983 Cmo07g00705 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00983 Cmo-Chr3:7402802 Cmo04g00033 Cmo-Chr4:212885 1.33E-153 dispersed
Cmo03g00983 Cmo-Chr3:7402802 Cmo07g00705 Cmo-Chr7:3176990 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74199 PF00069 Pkinase 4.50E-30 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g00983 - - bhj:120074099 1139.02