Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g01001 | ATGAAGGATAACTCCTCCAAACTTATTGTTTTCTTGCTTATAAGCTTCGTTTTCTTGAATCACCTCCTTGTGTCCTCACAACTTGATTATAGATTCTATGATGACTCGTGTCCCAACCTAACAAGAATTGTCAGATATGGCGTCTGGATGGCAGTTTCTAATGATACTAGGATGGCTGCTTCTCTCTTACGCCTTCATTTTCATGATTGCTTTGTCAACGGCTGTGATGGATCATTGTTGCTTGATGACACTAGCTCATTTAAAGGGGAGAAAAATGCATTGCCAAATATGAACTCAGTTCGAGGCTATGAGGTCATTGATGATATAAAGGCTGTTTTAGAGAGAGTCTGCCCATCTGTCGTGTCATGCACTGATATAGTGACTCTAGCAGCTAGAGAGGCTGTCTACCTTGCTGGAGGACCCTTTTGGCCCATTCCACTCGGTCGGCGAGATGGCACGACAGCAAGCGAGAGTGAAGCCAATCAGCTGCCATCACCGTTGGAGCCATTGGAGAATATCATTGCAAAATTCACTAAAAAAGGGCTTGATGTAAAGGATGTTGTCGTGCTCTCAGGTGCACACACTTTCGGGTTAGCTCGGTGCATGATGTTCAAGCATAGACTGTTCAACTTCGATGGCTCTGGCAATCCTGACCCAGAACTAGATGTCATGCTGCGACAGAATTTACAGAGCGTCTGTCCCAATCATGATGACTCCAACGACAAACTGGCCCCCTTGGACACGTACACGATCAGCAGGTTTGACAATGTGTATTACAGAAACTTGGTGAACAAGTTGGGACTTTTGCAGTCAGACCAAGCTCTGATGAAACACAATACAACTGCTCCGTTGGTGGTGAGCTACAGCAGGTACCCATACCTGTTTAACAGGGACTTTGGAGCATCAATGGTGAAGCTGGGCAATACTGGAGTCCTTACAGGCCAAAATGGGGAAATTAGGAAGAATTGCAGGGTGGTGAACTAG | 984 | 45.53 | MKDNSSKLIVFLLISFVFLNHLLVSSQLDYRFYDDSCPNLTRIVRYGVWMAVSNDTRMAASLLRLHFHDCFVNGCDGSLLLDDTSSFKGEKNALPNMNSVRGYEVIDDIKAVLERVCPSVVSCTDIVTLAAREAVYLAGGPFWPIPLGRRDGTTASESEANQLPSPLEPLENIIAKFTKKGLDVKDVVVLSGAHTFGLARCMMFKHRLFNFDGSGNPDPELDVMLRQNLQSVCPNHDDSNDKLAPLDTYTISRFDNVYYRNLVNKLGLLQSDQALMKHNTTAPLVVSYSRYPYLFNRDFGASMVKLGNTGVLTGQNGEIRKNCRVVN | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 7539228 | 7540988 | - | CmoCh03G010010.1 | Cmo03g01001 | 378464 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g01001 | 327 | ProSiteProfiles | Plant heme peroxidase family profile. | 27 | 327 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | CDD | secretory_peroxidase | 27 | 326 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo03g01001 | 327 | Pfam | Peroxidase | 49 | 290 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | Gene3D | - | 31 | 327 | - | - | |
Cmo03g01001 | 327 | PANTHER | PEROXIDASE 72-RELATED | 12 | 326 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 327 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | Gene3D | Peroxidase, domain 2 | 164 | 306 | - | - | |
Cmo03g01001 | 327 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Cmo03g01001 | 327 | ProSitePatterns | Peroxidases active site signature. | 59 | 70 | IPR019794 | GO:0004601 | |
Cmo03g01001 | 327 | PRINTS | Haem peroxidase superfamily signature | 59 | 73 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Haem peroxidase superfamily signature | 121 | 138 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Haem peroxidase superfamily signature | 139 | 151 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Haem peroxidase superfamily signature | 247 | 262 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PANTHER | PEROXIDASE | 12 | 326 | - | - | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 37 | 56 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 61 | 81 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 101 | 114 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 120 | 130 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 139 | 154 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 245 | 260 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 261 | 278 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01001 | 327 | PRINTS | Plant peroxidase signature | 301 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00465 | Cmo-Chr2:2484099 | Cmo03g01001 | Cmo-Chr3:7539228 | 3.81E-112 | dispersed | |
Cmo02g00676 | Cmo-Chr2:4288488 | Cmo03g01001 | Cmo-Chr3:7539228 | 9.09E-86 | dispersed | |
Cmo02g01253 | Cmo-Chr2:7506324 | Cmo03g01001 | Cmo-Chr3:7539228 | 4.16E-115 | dispersed | |
Cmo03g01001 | Cmo-Chr3:7539228 | Cmo15g00169 | Cmo-Chr15:782241 | 9.81E-107 | dispersed | |
Cmo12g00345 | Cmo-Chr12:2143584 | Cmo03g01001 | Cmo-Chr3:7539228 | 9.65E-83 | dispersed | |
Cmo18g00243 | Cmo-Chr18:1606394 | Cmo03g01001 | Cmo-Chr3:7539228 | 2.05E-63 | dispersed | |
Cmo03g01001 | Cmo-Chr3:7539228 | Cmo20g00342 | Cmo-Chr20:1675436 | 1.05E-106 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g01001 | K00430 | - | csv:101218459 | 589.341 |