Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01082 ATGCCGGCTTGGTGGGTAAGAAAATCGAGTAAAAACAAGGACCATCACAATCATCCCACTACCTTTCTCAACTTCTTCAACTCTTCTTCTTCTTCTTCTTCTTCCCCCAAAACTGAACCTAAGAACGCCAGCGACAAACCCAGGAGCTTCGATGAGGTCTCTCCGGTGATTTTCTCTCGCAATTCCCCCAGGTGTAGCAGGGATCTGGGCACTTCTGGTGCCGCCTCTTCTGGGTTTTCCGGTTTTGACTCCGATAGTGGGGATACCAGTGTTCCTCTTCCTCGACCTACTACTTCCGGCCTTGGGATTGATCATGGAGTCGGGAATGGATCTGGGTCTGTTTCGGTTTCAAGTGTTAGCTCCTCTGGCTCTTCCGATGATCATCCATCTGCTCAAGAACACCTTCAATTTGGAGGTCTCAGAGGATTTGCTGATACAAGAACAGAGAAAAGGCCAAGAAGTCCAGGTCCAGGATCAAGAGGACCCACCAGTCCTACATCGCCTCTCAACCCGCGGTTCTGTGGCATGAGTTTGGAGTCTCCTACAGGCAAGCTAGATGACGGGATGAGTCGATGTCACAAGCTGCCGCTACCTCCAAGTTCTCCCACCAGCCCGTCTTCCTTGACCAGCACGAGAGCTATCAATATCGGCGAGAACAACGTTGCTACACAACCGAAGTGGAAGAAAGGAAGGCTTCTAGGAAGGGGAACGTTTGGACATGTTTACCTTGGATTTAACAGTGTAAGTGGCCAAATGTGTGCAATCAAGGAGGTCAGGGTTATAAGCGACGATTCGACATCGAAGGAATGTCTCAAGCAATTGAACCAGGAGATTACCGTGCTCAGTCAGCTGTCGCATCCAAACATCGTCCGGTACTATGGTAGTGAAATGGGTGACGAGTCCCTCTCGGTCTATTTAGAATACGTCTCTGGTGGCTCAATTCACAAGTTACTTCAGGAATATGGTGCCTTCAAAGAACCTGTCGTAAGAAACTATACCCGAAAGATCCTTTCCGGGCTTGCTTATCTGCACGGGAGAAACACAGTGCATAGGGACATAAAAGGGGCAAATATCTTAGTCGATCCGAACGGCCAGGTCAAGTTGGTGGACTTTGGCATGGCTAAACATATTACGAATTGTACTTCGATGCTCTCCTTCAAAGGTAGTCCTTATTGGATGGCCCCCGAGGTTGTAATGAACACAAATGGCTACAGTCTTGCTGTAGACATTTGGAGTTTAGGGTGCACGGTTCTTGAAATGGCAACGTCCAAACCGCCTTGGAGCAAATACGAAGGGGTGGCTGCCATTTTCAAAATTGGGAATAGTAAAGACATTCCAGAAATTCCAGATCATCTCTCGAACGATGCTAAAAGTTTCGTGCAATTATGCTTGCAACGGGACCCGGCTGCACGTCCTTCGGCTGCAGAACTACTGGATCACCCTTTTGTTCAAGATGCGGTAACACCAAGAGCGTCCGATGTTAACTTGTCCATGGATGCATTCCTGTTTAGTTTCGATGGAAGCCAGACTCCGCCATTGTTAGATCGGCATCCAAACCGAAAAAGTATAAGCATATGCGATGGAGATTATGCGACAAACCCAACAATCTCTTCGAGAACTTCGAGGAGTCCCAGGGGAAACGCAAGATTGATCACATCCTTGCCTGTCTCTCCTAGTTCAAGTCCATTACGGTCGTATGGCCCCGCACACCAGAGCTGTTATCTTTCACCACCACACACATCTTACATGGGGTTGGGGCAAAGCGGATACAATTTAAACGAATATGCATATAACACAAGACCGAACACATTGTTCACCCTCGATCCATCACGAGAGTCGTTACTATTGAAAGTTCGGACTCACGGCGGATCACCAATAAGACCTCTATGA 1890 48.1 MPAWWVRKSSKNKDHHNHPTTFLNFFNSSSSSSSSPKTEPKNASDKPRSFDEVSPVIFSRNSPRCSRDLGTSGAASSGFSGFDSDSGDTSVPLPRPTTSGLGIDHGVGNGSGSVSVSSVSSSGSSDDHPSAQEHLQFGGLRGFADTRTEKRPRSPGPGSRGPTSPTSPLNPRFCGMSLESPTGKLDDGMSRCHKLPLPPSSPTSPSSLTSTRAINIGENNVATQPKWKKGRLLGRGTFGHVYLGFNSVSGQMCAIKEVRVISDDSTSKECLKQLNQEITVLSQLSHPNIVRYYGSEMGDESLSVYLEYVSGGSIHKLLQEYGAFKEPVVRNYTRKILSGLAYLHGRNTVHRDIKGANILVDPNGQVKLVDFGMAKHITNCTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTVLEMATSKPPWSKYEGVAAIFKIGNSKDIPEIPDHLSNDAKSFVQLCLQRDPAARPSAAELLDHPFVQDAVTPRASDVNLSMDAFLFSFDGSQTPPLLDRHPNRKSISICDGDYATNPTISSRTSRSPRGNARLITSLPVSPSSSPLRSYGPAHQSCYLSPPHTSYMGLGQSGYNLNEYAYNTRPNTLFTLDPSRESLLLKVRTHGGSPIRPL 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8095928 8100823 + CmoCh03G010820.1 Cmo03g01082 378545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01082 629 MobiDBLite consensus disorder prediction 1 190 - -
Cmo03g01082 629 MobiDBLite consensus disorder prediction 110 131 - -
Cmo03g01082 629 SMART serkin_6 227 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g01082 629 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 1 606 - -
Cmo03g01082 629 SUPERFAMILY Protein kinase-like (PK-like) 226 572 IPR011009 -
Cmo03g01082 629 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 606 - -
Cmo03g01082 629 ProSitePatterns Protein kinases ATP-binding region signature. 233 256 IPR017441 GO:0005524
Cmo03g01082 629 Gene3D Transferase(Phosphotransferase) domain 1 223 500 - -
Cmo03g01082 629 ProSiteProfiles Protein kinase domain profile. 227 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g01082 629 MobiDBLite consensus disorder prediction 19 40 - -
Cmo03g01082 629 MobiDBLite consensus disorder prediction 55 96 - -
Cmo03g01082 629 CDD STKc_MEKK1_plant 226 483 - -
Cmo03g01082 629 Pfam Protein kinase domain 228 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01082 Cmo07g00829 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01082 Cmo-Chr3:8095928 Cmo18g01283 Cmo-Chr18:12410799 4.11E-144 dispersed
Cmo12g01088 Cmo-Chr12:9974555 Cmo03g01082 Cmo-Chr3:8095928 1.52E-89 dispersed
Cmo17g00245 Cmo-Chr17:1450940 Cmo03g01082 Cmo-Chr3:8095928 1.50E-89 dispersed
Cmo03g01082 Cmo-Chr3:8095928 Cmo07g00829 Cmo-Chr7:3882446 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74205 PF00069 Pkinase 6.20E-73 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01082 K04421 - csv:101203907 978.778