Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01092 ATGGAAGGAAAGGGAAGTGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATTGCTATGATCTCTCTTCAATTTGGCTACGCTGGGATGAACATCATCACTAAAGTAGCTCTCAACCGCGGTATGAGCCATTATGTTCTCGTCACCTATCGTCAGGCCTTTGCCACGATCGTGCTCGCTCCGTTCGCCTTCTTCTTCGAAAGGAAAGTAAGACCAAAGATTAGTTTCCGTCTATTCGTGCAGATTTTCTTTATGGGTTTGTTAGGACCCGTGATTGATCAAAACTTTTATTATGCTGGGTTGAAGCTCACTTCTCCTACCTTTTCATGTGCCATGAGCAATATGCTTCCAGCAATGACATTCATCTTGGCTCTTCTTTGCAGGATGGAGAAATTGGAGATGAAGAAAGTGAGGTGCCAAGCCAAGGTGGTGGGAACAACGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGATTCACCCCTTTCAAACCACTTATCAACATTGGCTCAAGGCTTCCATTCTCCTCCTCTTTGCCAATCTTTCTTGGGCTTTCTTCTTCATCCTTCAGGCAATAACATTGAAGAATTACACAGCCCATCTGTCTCTTACAACCCTTGTGTGCTTCTTGGGGACATTGCAATCCATGGCTGTCACCTTTGTAATGGAAAACAAAGCTTCTGTTTGGAGCGTTGGATGGGACATGAATCTTCTTGCTGCTGTTTATGCCGGAATAGTTTCATCAAGCATAGCTTACTATGTCCAAGGGATGATTATGCAAAAGAGAGGGCCTGTGTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCTATAATGGCCACTTTCATGCTCGCCGACAACATTTACGTCGGGCGTGTTGTTGGAGGTGTTGTAATGGTGGTGGGGCTGTACTTAGTGCTATGGGGAAAATACAGAGATTACAAAGAAAATGAAGGAATGATAGAAGAGGCCGCCATTGTTGAACCAGTGAAGCTTGAGAAGAAGGAGAGGAAATTGGCAACAGTCGTTGAAGAAGACGAAGAAGAAGAAGAAGAAGAAGGAGAAACGACATCAACATCATTAAACGACATCGAAATGCAAAGGAACGACACAACATCAAATGTCGACAATAATAATGTTACAAAATTGCCATGTCCTCCTCCACCACCCATCATTGTCGTATAG 1203 43.81 MEGKGSGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATIVLAPFAFFFERKVRPKISFRLFVQIFFMGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTTVTVGGAILMTLYKGIHPFQTTYQHWLKASILLLFANLSWAFFFILQAITLKNYTAHLSLTTLVCFLGTLQSMAVTFVMENKASVWSVGWDMNLLAAVYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMATFMLADNIYVGRVVGGVVMVVGLYLVLWGKYRDYKENEGMIEEAAIVEPVKLEKKERKLATVVEEDEEEEEEEGETTSTSLNDIEMQRNDTTSNVDNNNVTKLPCPPPPPIIVV 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8612856 8616210 - CmoCh03G010920.1 Cmo03g01092 378555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01092 400 PANTHER WAT1-RELATED PROTEIN 12 343 - -
Cmo03g01092 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 317 - -
Cmo03g01092 400 MobiDBLite consensus disorder prediction 347 400 - -
Cmo03g01092 400 MobiDBLite consensus disorder prediction 349 364 - -
Cmo03g01092 400 Pfam EamA-like transporter family 18 156 IPR000620 GO:0016020|GO:0016021
Cmo03g01092 400 Pfam EamA-like transporter family 176 313 IPR000620 GO:0016020|GO:0016021
Cmo03g01092 400 PANTHER WAT1-RELATED PROTEIN 12 343 IPR030184 GO:0016021|GO:0022857
Cmo03g01092 400 Coils Coil 338 358 - -
Cmo03g01092 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Cmo03g01092 400 MobiDBLite consensus disorder prediction 365 387 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01092 Cmo-Chr3:8612856 Cmo06g00018 Cmo-Chr6:122909 2.53E-149 dispersed
Cmo03g01092 Cmo-Chr3:8612856 Cmo18g00829 Cmo-Chr18:9683649 1.05E-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01092 - - cpep:111803342 696.427