Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01110 ATGGGGGTTCCACAGACGATGGAAATTCTGAGCGCGAGAGCCGCACTTGTGAGAGAGTCGCTGCAGAAGAGCCAGAATGTCACAGAGAACATGGTCTCCATTCTTGGCTCCTTTGACTACCGTCTCTCCGCCCTTGAAACTGCAATGCGGCCTACTCAGATAAGAACTCATTCAATCCGGATGGCACATGAAAATATTGACAAGACATTGAAGGCTGCGGAAAGTATGCTGGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTAGAAATGTACTTGGAAGCAATCAGTCAACTACGGAGCACCAATCGCTACTTTACTAGTAACAAAAATTTCAAAAGGAACGAAGCTATTCTTACCCATACAAGCAACTTGCTTGTCAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTTTTAACAAATTACAGTAAGCCAGTGGAACCCGAACGTCTATTCGACTGCCTCCCCAACTCGTTGCGTCCATCGTCAGCATCTAAGCAAGGTGATAGTGGTAGCAAAAATAGTTCTGAACATCACAACAAAAGCTTAGAAGCTTCCGTCTTCATTCCCCCAACTCTTATTCCTCCCAGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTCTAGCTGGCCATCAGCAGCAACTGTTTAGAATATACAGGGATATTCGTGGTGCAGTCTTAGAACAGAGTCTTAGGAAATTAGGCGTTGAGAGGCTTAGCAAGGATGATGTCCAGAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTTAAATTGCTGTTTGCTGGGGAAAGGAAAATATGTGATCAAATATTCGAAGGTGCAGATGCTCTCCAGGACCAATGCTTCGCAGATGTGACTACAAGTAGCGTGTCAGTGCTACTAAGTTTTGGAGAGGCAATTGCCAAAAGCAAGAGATCACCAGAAAAATTGTTTGTTCTTTTAGACATGTTTGAAATAATGCGAGAACTGCAACCTGAGATTGAAACACTATTTGGAAGTAAAGCATGCATTGAAATGCGGGATTCTGCATTGAGCTTAACTATGCGCCTTGCCGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAGAGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAATTACGTCAAGTTTTTATTCGACTACAAATCTACTTTGAAGCAATTATTCCAAGGTTTTGAAGCTAGCGATCCAGATGCTCAGTTAGGAGTGGTAACTAAAAGAATTGTGCAGGCCCTTCAGACTAACCTTGATGGGAAATCTAAGCAATATAGGGATCCTGCACTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGAAGATCGGAGGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGATTTTGCAATGCCTCACTGTTCAGGCCTCAGGTAGTGGTGGTGCATCGGGAGATGCTGGCGGTGGACTTTCAAGAGCTATGGTGAGAGATAGGTTCAAGACTTTTTACATTCAATTTGAAGAGCTTCATCAACGGCAATCTCAGTGGACAGTTCCTGACAGTGAGTTGCGAGAGTCATTGAGGTTGGCAGTTGCTGAAGTTTTATTGCCTGCCTACCGATCTTTCATCAACCGTTACGGGCAGATTGAGAATGGAAAAGCTTCTCAAAGATATATCAGATATTCTCCGGAGGATCTTGAGCGTATGCTAAATGAATTTTTTGAGGGTAAGACATTCAGTGAACAAAAGCGCTAG 1911 43.54 MGVPQTMEILSARAALVRESLQKSQNVTENMVSILGSFDYRLSALETAMRPTQIRTHSIRMAHENIDKTLKAAESMLAQFDLTRKAEAKILRGPHEDLEMYLEAISQLRSTNRYFTSNKNFKRNEAILTHTSNLLVKAISKLEDEFRQLLTNYSKPVEPERLFDCLPNSLRPSSASKQGDSGSKNSSEHHNKSLEASVFIPPTLIPPRVLPLLHDLAQQMILAGHQQQLFRIYRDIRGAVLEQSLRKLGVERLSKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKICDQIFEGADALQDQCFADVTTSSVSVLLSFGEAIAKSKRSPEKLFVLLDMFEIMRELQPEIETLFGSKACIEMRDSALSLTMRLAETAQETFVDFEEAVERDATKTAVLDGTVHPLTSYVINYVKFLFDYKSTLKQLFQGFEASDPDAQLGVVTKRIVQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQASGSGGASGDAGGGLSRAMVRDRFKTFYIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFINRYGQIENGKASQRYIRYSPEDLERMLNEFFEGKTFSEQKR 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 8945812 8953254 + CmoCh03G011100.1 Cmo03g01110 378573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01110 636 SUPERFAMILY Cullin repeat-like 76 627 IPR016159 -
Cmo03g01110 636 MobiDBLite consensus disorder prediction 168 190 - -
Cmo03g01110 636 Pfam Exo70 exocyst complex subunit 272 624 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo03g01110 636 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 633 - -
Cmo03g01110 636 Gene3D Exocyst complex component Exo70 75 636 - -
Cmo03g01110 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 633 IPR004140 GO:0000145|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01110 Cmo07g00855 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01110 Cmo-Chr3:8945812 Cmo04g01515 Cmo-Chr4:7747077 0 dispersed
Cmo07g00855 Cmo-Chr7:4035693 Cmo03g01110 Cmo-Chr3:8945812 9.55E-150 transposed
Cmo03g01110 Cmo-Chr3:8945812 Cmo07g00854 Cmo-Chr7:4034055 2.20E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01110 K07195 - csv:105436019 1117.06