Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01181 ATGGCTACTTCTGGGTTTCTTCTTTACCTACTTTCTGCCTCTTCCATCGCCATTCTCTCTGCTCTGTACCTCTCTAGCCCTTCTTCTTCTCCTTCTTCCTCGTTCGTCCTCTCCGATTCTCTCTCCACCGACAAAATATGGCCGGATTTGGAGCTGAGTTGGAGGCTTGTGGTGGCGACGGTGATTGGATTTCTCGGCTCCGCCTGCGGAACCGTCGGAGGAGTTGGTGGCGGCGGCATTTTTGTCCCTATGCTTACTTTGATTATTGGGTTCGACACCAAATCTGCTGCTGCCATTTCCAAATGTATGATAATGGGGGCTTCTTCCTCGTCGGTTTGGTACAATTTAAGAGTGGCGCACCCAACGAAGGATGTGCCGATTATAGACCATGATTTGGCGTTGCTGTTTCAGCCCATGTTGATGCTTGGAATCACCGTTGGTGTTTCCCTTAGCGTGGTTTTCCCCTATTGGCTCATCACTGTTCTCATCATTATCCTCTTTATTGGGACTTCCTCCAGGTCCTTCTTCAAGGGAATTGAGATGTGGAAAGAAGAAACCATTCTAAAGAAAGAATTCGCCAAACAAAGTGAGACTTTTGTGAATTCTCGTGGCGAATTATTGATTGATGTAGAGTATGACCCACTGATACCCAAAGAGCAGAAGACAGCACTGGAATTAATGTGCTTCAATCTTAGGTGGAAAAGGACCTCCATTTTGTTGGTTGTCTGGATTTCTTTCCTCATACTTCAAGTTGTGAAGAATGATGTAGCAGTTTGTAGCCCTTGGTATTGGATCCTCTTCTCCTTGCAGTTTCCTGTAGCATTTGCAGTGTTTGGATATGAAGCAAGAAAGCTATACAATGAACATAAGAAGAGGATGGAGGCAGGAAACTTGGAACACATTTGTGAGGCTTCAATAGGATGGACTGGCACACACCTTGCTTTCTGTGCACTTTGTGGCATTGTAGGAGGCACTGTTGGAGGCCTTTTGGGTTCTGGTGGTGGCTTTGTTTTAGGCCCTTTGCTCTTGGAGATTGGCGTTGTCCCTCAGGTTGCTAGTGCTACTGCCACTTTTGTTATGATGTTCTCCTCATCCTTGTCTGTTGTTGAATTCTACTTGCTCCACAGATTCCCCATTCCATTTGCTCTGTATCTTACGTCGGTGTCGGTTTTAGCCGGGTTCTGGGGGCAGTTCTTTGTTAGAAAAATGATCGCCATTCTGAGACGAGCCTCACTTATTGTGTTTGTCCTCTCTGGTGTCATCTTTGCCAGTGCCATCACCATGGGTGCGTAA 1293 46.4 MATSGFLLYLLSASSIAILSALYLSSPSSSPSSSFVLSDSLSTDKIWPDLELSWRLVVATVIGFLGSACGTVGGVGGGGIFVPMLTLIIGFDTKSAAAISKCMIMGASSSSVWYNLRVAHPTKDVPIIDHDLALLFQPMLMLGITVGVSLSVVFPYWLITVLIIILFIGTSSRSFFKGIEMWKEETILKKEFAKQSETFVNSRGELLIDVEYDPLIPKEQKTALELMCFNLRWKRTSILLVVWISFLILQVVKNDVAVCSPWYWILFSLQFPVAFAVFGYEARKLYNEHKKRMEAGNLEHICEASIGWTGTHLAFCALCGIVGGTVGGLLGSGGGFVLGPLLLEIGVVPQVASATATFVMMFSSSLSVVEFYLLHRFPIPFALYLTSVSVLAGFWGQFFVRKMIAILRRASLIVFVLSGVIFASAITMGA 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9243147 9245322 - CmoCh03G011810.1 Cmo03g01181 378644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01181 430 PANTHER CEREBLON 2 429 - -
Cmo03g01181 430 Pfam Sulfite exporter TauE/SafE 239 420 IPR002781 GO:0016021
Cmo03g01181 430 Pfam Sulfite exporter TauE/SafE 61 178 IPR002781 GO:0016021
Cmo03g01181 430 PANTHER TRANSMEMBRANE PROTEIN TAUE-RELATED 2 429 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01646 Cmo-Chr1:12485130 Cmo03g01181 Cmo-Chr3:9243147 1.53E-113 dispersed
Cmo03g01181 Cmo-Chr3:9243147 Cmo13g00734 Cmo-Chr13:7283531 5.58E-31 dispersed
Cmo03g01181 Cmo-Chr3:9243147 Cmo09g00542 Cmo-Chr9:2576555 7.61E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01181 - - bhj:120072699 681.019