Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01182 ATGAAGTTGCCGCTTTTTATGATTCCTCTGATCGCTGCTTGTCTTTTTGTCATTTTGGGTCCGCCGTTCTTGTCGGACTGGCTCACTTTCCTTGATCGATATGCTTCATTCCGGAGCTCTCTTTCTTCTTCCACCTCAGAAATGAATTCTCATTCAAATGCCACGGCGGCGATACCGGTGCCGGTGACGGTGGATGGTCAAACAGTGGAACAACAACAACAACAACGCCAACCTCTGTTTAACCACTCTGTTTCAAATCACTCTGTTCTTGCTTCTTCTTCTTCTTCTCCACCGCCACCACCGATCGACGAAATGCAGATTCTTCCACCGAATAGGACGAGAGTCAACGAAGAGTTGCTAGAAACCGCCATTAATGAAGTGATCAAGAACGCTTCTGCTGAAAGTAATTATGAACCGGCGGCGAAAGCTAGAAAACAGAGGAGATATACAAAATTGGAGAGAATCGAAGCGGGGCTAAGAGGAGCAAGAGCCGCCATTAGAGAAGCCATGTTCCAAAACCAAACACAAGATTCCGACTTCGTTCCCTCTGGCCCAATGTATTGGAATGCCAAAACTTTTCACAGGTCAAATTTGATGGATAAACAGAGAATGTCTCTGAGTTACCAACAAATGGAGAAGGAGCTGAAGATCTTTGTGTACGAAGAAGGAGAGCCTCCCCTGTTTCACAACGGCCCCTGCAAGAACATTTACTCAACGGAAGGGAATTTCATCCATGCCATCGAGATGGACTCCCGGTTTCGAACCAACGACCCCAACAAGGCCCATGTCTTCTTCCTTCCTCTGAGTGTTGTCATGCTCGTTCGGTTTGTCTACGTTCACGACTCCCATGACTTCACTCCACTACGACGCACCGTCGCTGATTATGTCAATGTCATCGGAACCAAATATCCATTCTGGAACCGCACCCTCGGCGCTGATCATTTCATGCTCTCCTGCCACGATTGGGGTCCGGAAGTATCAAAATCAGAACCCCATTTGTACAAGAACTCCATTCGGGTACTGTGCAACGCCAACACATCCGAAGGCTTCAACCCATCGAAGGACGTATCACTCCCGGAAATCAATCTGCAGACGGGTGTGTTGACAGGATTTTTAGGTGGCCCATCTCCCTCCCGCCGCCCAATTCTGGGTTTCTTCGCCGGCGGACTTCACGGCCCAATAAGGCCCATTCTAATCCAGCAATGGGAGAACAAGGACCAGGATATTCGAGTCCACCAGTACCTCCCGGAAGGGGTCTCTTACATTGAGATGATGAGGAAGAGCAGGTTCTGCCTCTGCCCCAGCGGCTACGAAGTCGCCAGTCCCAGAATCGTGGAGGCCATTTACACCGGCTGCGTTCCGGTCCTCATTTCCGATCACTACGTCCCGCCGTTCAGCGACGTCCTCAATTGGAAATCTTTCTCCGTCGAAGTCTCGGTCAACGACATTCCGAACTTGAAGAAGATCCTGGCCGGAATATCGACGCGGCAGTACCTGAGAATGTACCGGAGAGTGGTCAACGTTAGAAGACACTTCGTAGTCAACTTTCCGCCGAAGAGATTCGATGTTTACCATATGATCCTTCATTCTGTGTGGCTTAGAAGACTCAATCTTGGACTACGGGATCATTGA 1632 49.45 MKLPLFMIPLIAACLFVILGPPFLSDWLTFLDRYASFRSSLSSSTSEMNSHSNATAAIPVPVTVDGQTVEQQQQQRQPLFNHSVSNHSVLASSSSSPPPPPIDEMQILPPNRTRVNEELLETAINEVIKNASAESNYEPAAKARKQRRYTKLERIEAGLRGARAAIREAMFQNQTQDSDFVPSGPMYWNAKTFHRSNLMDKQRMSLSYQQMEKELKIFVYEEGEPPLFHNGPCKNIYSTEGNFIHAIEMDSRFRTNDPNKAHVFFLPLSVVMLVRFVYVHDSHDFTPLRRTVADYVNVIGTKYPFWNRTLGADHFMLSCHDWGPEVSKSEPHLYKNSIRVLCNANTSEGFNPSKDVSLPEINLQTGVLTGFLGGPSPSRRPILGFFAGGLHGPIRPILIQQWENKDQDIRVHQYLPEGVSYIEMMRKSRFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVNDIPNLKKILAGISTRQYLRMYRRVVNVRRHFVVNFPPKRFDVYHMILHSVWLRRLNLGLRDH 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9249825 9251771 - CmoCh03G011820.1 Cmo03g01182 378645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01182 543 MobiDBLite consensus disorder prediction 86 107 - -
Cmo03g01182 543 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 232 461 - -
Cmo03g01182 543 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 120 539 IPR004263 GO:0006486|GO:0016757
Cmo03g01182 543 Pfam Exostosin family 212 491 IPR040911 -
Cmo03g01182 543 PANTHER EXOSTOSIN FAMILY PROTEIN 120 539 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01182 Cmo07g00911 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01182 Cmo-Chr3:9249825 Cmo09g01250 Cmo-Chr9:10767588 2.79E-172 dispersed
Cmo20g00550 Cmo-Chr20:2662170 Cmo03g01182 Cmo-Chr3:9249825 1.75E-31 wgd
Cmo03g01182 Cmo-Chr3:9249825 Cmo07g00911 Cmo-Chr7:4363035 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01182 - - cpep:111804140 976.467