Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01199 ATGGGAGGCGTAAGATTCAGCATCAGGACTTTACGAAGTTCTGTCCCAATGAGGAATTTCGTCTGGCAAGTTCTATTGGGCCGATGGTTCACCGTCTTCGCTTCTTTATTGATCATGTCCGTTTCCGGCGCCACATACATGTTTGCACTCTACTCCGCCGACATCAAATCCTCCTTGGATTACGATCAGACCACGCTCAACCTCATCGGCTTCTTCAAGGATCTGGGTGCCAACGTTGGAGTCTTCTCGGGCCTCATCAATGAAATTACACCGCCTTGGGTCGTCCTCTTAATTGGTGGGGTAATGAATTTCTTTGGCTATTTCATGATTTGGCTTTCTGTCACTCACCGAATCCCCAAACCCAAACTGCCCGCTATGTGTTTGTATATATGCCTAGGTGCGAATTCTCAGACATTTGCTAATACAGGGGCTTTGATCCCTTCAGTGAAGAATTTCCCCCAGAATCGAGGTAATGTATTGGGTTTATTGAAAGGATTTGTTGGGTTGAGTGGGGCAATTTTGACTCAGATTTACCATGCTTTTTATGGAGATGATTCTAAGGATTTTATCTTGCTCATTGCTTGGCTGCCTACTGCTGTTTCTTTCTTGCTTCTTCGGGTTGTTAGAGTAGTGGAAGTGAACCGAATATCCAAATCCAGTGATCTAAAGAATTTCTATTATATGCTCTACACTTCCCTTGTTCTTGCTGGCTTCCTCATGATCTTGATCATTATTCAAAACGAGCTCATTTTTACTAGAATTCAGTATTTGGGTTGTGCATTTATCCTCCTAGTGCTTCTTTTTCTTCCCCTTGTCGTTGTTATAAGAGAAGAATTCCTCATGAGGAAGAGGAAATCACAAGATATGGATGTAATTTCTGTGCTTCCACTAGACCCATCTCCCGTTGAATTATCATCCTCTAGACCACCAAGTTCTTGCTTCAAAAATGTGTTCAAACCGCCGGAAAGAGGAGACGATTACACCATTTTACAAGCAATTTTCAGTGTAGATATGTTGATACTGTTTGTTGCTACAATCTGTGGGGCTGGTGGGGCTTTGACTGCAATGGACAACTTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAGCTCATAGCATTTCTACTTTCACTTCCCTCGTGAGTATATGGGGCTTTCTCGGTCGAGCATTTTCAGGTTATGCTTCTGAATTCTTATGGACCAAATATAGCTTCTCTCGCCCTCTGTTCTTCACTCTTGTGCTTCTTTTCTCTTGCGTTGGTCATCTTCTAATTGCCTTTGGAGTCCCAACTTCCCTTTATTTTTCTTCAGTGATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTTGCCATTGTTTCTGAATTATTTGGGTTGAAATACTATGCAACTTTGTATAGCATAAGCGGCATTGCTAGCCCAGTTGGCTCATACATTTTCAATGTGAAAGTAGCTGGCTTTTTATACGACCAAGAGGCTAGAAAGCAAATGGCTGCCTCTGGTCTTGTAACTGTTGCTGGTAGGGACTTGGCCTGCAAGGGCGTCCATTGTTATAGATTAGCTTTTCTGATAATCACTGCTGCAACCGTGTTGGGTTGTGTTGTTTCTTTCATTTTGGTGCTTCGAACTTGGGAATTCTATAAGGGTGATATCTATAAGAAGTTTAGAGAGGAAAGAACGGAAACAGAATGA 1695 42.65 MGGVRFSIRTLRSSVPMRNFVWQVLLGRWFTVFASLLIMSVSGATYMFALYSADIKSSLDYDQTTLNLIGFFKDLGANVGVFSGLINEITPPWVVLLIGGVMNFFGYFMIWLSVTHRIPKPKLPAMCLYICLGANSQTFANTGALIPSVKNFPQNRGNVLGLLKGFVGLSGAILTQIYHAFYGDDSKDFILLIAWLPTAVSFLLLRVVRVVEVNRISKSSDLKNFYYMLYTSLVLAGFLMILIIIQNELIFTRIQYLGCAFILLVLLFLPLVVVIREEFLMRKRKSQDMDVISVLPLDPSPVELSSSRPPSSCFKNVFKPPERGDDYTILQAIFSVDMLILFVATICGAGGALTAMDNLGQIGSSLGYSAHSISTFTSLVSIWGFLGRAFSGYASEFLWTKYSFSRPLFFTLVLLFSCVGHLLIAFGVPTSLYFSSVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPVGSYIFNVKVAGFLYDQEARKQMAASGLVTVAGRDLACKGVHCYRLAFLIITAATVLGCVVSFILVLRTWEFYKGDIYKKFREERTETE 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9357600 9359294 + CmoCh03G011990.1 Cmo03g01199 378662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01199 564 PANTHER MFS TRANSPORTER 14 562 - -
Cmo03g01199 564 CDD MFS_Mch1p_like 27 534 - -
Cmo03g01199 564 Gene3D MFS general substrate transporter like domains 328 547 IPR036259 -
Cmo03g01199 564 Pfam Major Facilitator Superfamily 342 541 IPR011701 GO:0022857|GO:0055085
Cmo03g01199 564 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 562 - -
Cmo03g01199 564 Pfam Nodulin-like 28 275 IPR010658 -
Cmo03g01199 564 SUPERFAMILY MFS general substrate transporter 29 547 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01199 Cmo-Chr3:9357600 Cmo04g01463 Cmo-Chr4:7484058 0 dispersed
Cmo15g00510 Cmo-Chr15:2350179 Cmo03g01199 Cmo-Chr3:9357600 0 wgd
Cmo03g01199 Cmo-Chr3:9357600 Cmo06g00393 Cmo-Chr6:1920809 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01199 - - csv:101203981 922.924