Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g01239 | ATGTCTAAGGATCTCGAAGCCGGTGGGTTCGCTACCAAGGACTACCAAGACCCACCACCAGCACCATTGATCGACGCCGACGAGTTCACTCAATGGTCTTTTTACAGAGCCATCATCGCCGAGTTCGTCGCCACGCTTTTGTTCTTGTACGTCACTGTTCTCACTGTCATTGGCTACAGTAACCAGTCCGACATCAAAAACGGCGGCCAAATCTGCGGCGGGGTCGGTATTCTTGGCATTGCTTGGGCATTCGGCGGCATGATTTTCGTCCTCGTTTACTGTACCGCTGGAATTTCCGGAGGCCACATTAACCCAGCGGTGACTTTTGGGTTGTTTTTGGCTCGGAAAGTGTCTTTGGTTAGAGCAATTCTTTACATGGCGGCTCAATGTTTGGGCGCCATTTGTGGGTGTGCTTTAGTGAAATCGTTCCAGAAGGCTCATTACAATGAGTACGGCGGTGGAGCCAATTCACTCGCCGATGGGTACAGCACCGGCACCGGCTTAGCCGCAGAGATCATCGGAACTTTCGTTCTTGTTTACACCGTCTTCTCCGCCACCGATCCCAAACGGAATGCCAGAGATTCTCACGTTCCTGTTTTGGCGCCACTCCCAATTGGGTTCGCGGTGTTTATGGTTCATTTGGCCACCATTCCAATCACCGGCACCGGCATCAACCCAGCTCGAAGCTTTGGAGCCGCCGTGATCTTTAACAAAGACAAGCCATGGGATGACCAGTGGATCTTTTGGGTTGGCCCCTTCATTGGAGCTGCCATTGCTGCAATTTATCACCAAATCATACTGAGAGCAGGGGCAGTTAAAGCTCTGGGATCGTTCAGAAGTTCCACCTCCGTTTAA | 855 | 51.7 | MSKDLEAGGFATKDYQDPPPAPLIDADEFTQWSFYRAIIAEFVATLLFLYVTVLTVIGYSNQSDIKNGGQICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYMAAQCLGAICGCALVKSFQKAHYNEYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKDKPWDDQWIFWVGPFIGAAIAAIYHQIILRAGAVKALGSFRSSTSV | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9556212 | 9557668 | - | CmoCh03G012390.1 | Cmo03g01239 | 378702 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g01239 | 284 | CDD | MIP | 36 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 8 | 281 | IPR034294 | - | |
Cmo03g01239 | 284 | Gene3D | Glycerol uptake facilitator protein. | 21 | 284 | IPR023271 | - | |
Cmo03g01239 | 284 | PANTHER | AQUAPORIN PIP2-4-RELATED | 8 | 281 | - | - | |
Cmo03g01239 | 284 | SUPERFAMILY | Aquaporin-like | 28 | 268 | IPR023271 | - | |
Cmo03g01239 | 284 | Pfam | Major intrinsic protein | 29 | 263 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | PRINTS | Major intrinsic protein family signature | 36 | 55 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | PRINTS | Major intrinsic protein family signature | 84 | 108 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | PRINTS | Major intrinsic protein family signature | 121 | 140 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | PRINTS | Major intrinsic protein family signature | 170 | 188 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | PRINTS | Major intrinsic protein family signature | 206 | 228 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | PRINTS | Major intrinsic protein family signature | 246 | 266 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | TIGRFAM | MIP: MIP family channel proteins | 40 | 262 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Cmo03g01239 | 284 | ProSitePatterns | MIP family signature. | 102 | 110 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00893 | Cmo-Chr2:5507658 | Cmo03g01239 | Cmo-Chr3:9556212 | 1.60E-173 | dispersed | |
Cmo03g01239 | Cmo-Chr3:9556212 | Cmo07g00973 | Cmo-Chr7:4770232 | 0 | dispersed | |
Cmo03g01241 | Cmo-Chr3:9569816 | Cmo03g01239 | Cmo-Chr3:9556212 | 1.65E-157 | dispersed | |
Cmo07g00972 | Cmo-Chr7:4764962 | Cmo03g01239 | Cmo-Chr3:9556212 | 9.62E-08 | dispersed | |
Cmo19g00753 | Cmo-Chr19:7683024 | Cmo03g01239 | Cmo-Chr3:9556212 | 4.85E-156 | dispersed | |
Cmo03g01238 | Cmo-Chr3:9553475 | Cmo03g01239 | Cmo-Chr3:9556212 | 1.13E-163 | tandem | |
Cmo03g01239 | Cmo-Chr3:9556212 | Cmo03g01240 | Cmo-Chr3:9559511 | 0 | tandem | |
Cmo03g01239 | Cmo-Chr3:9556212 | Cmo06g00371 | Cmo-Chr6:1792397 | 4.19E-154 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g01239 | K09872 | - | csv:101215366 | 538.88 |