Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01246 ATGGTGAAGTCTTGTGATGCATCTCTTTTGTTGGAGATCAAAGAGGAAGAAGGTGGAATTGTGTCGGAGATGAAGTCGTCAAGGAGCTTTGGGATTAGAAACCTCAAATATGTTAATAAAATCAAACAGCTTCTTGAAAATGAGTGTCCCGACACTGTCTCTTGTGCTGATATTATGGCTCTTGCTGCAAGAGATGCCATTGTTCTGATAGGGGGATTAGAGATGGAGATGAAAACAGGGAGGAGAGACAGCAGAGAATGCTATGAAGGAGTGGTGGAAGACTTCATTCCTAATCATAATGATTCTCTTTCGTTGGTTCTTTCTAGGTTTCAAGATATTGGCATTGATGCTCAAGCTACCGTTGCTCTTTTAGGAGCTCACTCGGTGGGTCGGGTCCACTGCGTAAATCTAGTGAACCGGCTCTACCCGACAGTCGATCCGACTTTGGATCCGGATCATGGAGAATATCTAAAAAGAAGGTGCCCGAGCCCGAACCCGGACCCGAAGGCAGTTTTGTACGCAAGAAACGATTTGCAAACTCCGATGGTGCTGGACAACAACTACTATAAGAACGTATTGGGCCAGAAGGCCCTTTTGTTGGTGGACCAACAATTGGGCTCTAGCCCAATAACTCTTCCTTACGTCCAGCACATGGCCTCCAATAACACTTACTTTCTGGCCCAATTTGCCAGGGCTGTGCTTTTGCTGTCAGAGAACGCCCCTCTCACCGACGAAGAAGGAGAAATTAGAAAGGATTGTCGACGTGTCAACAAGTGA 777 46.2 MVKSCDASLLLEIKEEEGGIVSEMKSSRSFGIRNLKYVNKIKQLLENECPDTVSCADIMALAARDAIVLIGGLEMEMKTGRRDSRECYEGVVEDFIPNHNDSLSLVLSRFQDIGIDAQATVALLGAHSVGRVHCVNLVNRLYPTVDPTLDPDHGEYLKRRCPSPNPDPKAVLYARNDLQTPMVLDNNYYKNVLGQKALLLVDQQLGSSPITLPYVQHMASNNTYFLAQFARAVLLLSENAPLTDEEGEIRKDCRRVNK 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9589649 9591376 + CmoCh03G012460.1 Cmo03g01246 378709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01246 258 PANTHER PEROXIDASE 21 2 255 - -
Cmo03g01246 258 ProSiteProfiles Plant heme peroxidase family profile. 1 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 CDD secretory_peroxidase 2 256 IPR033905 GO:0004601|GO:0042744
Cmo03g01246 258 SUPERFAMILY Heme-dependent peroxidases 2 257 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 Pfam Peroxidase 2 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PANTHER PEROXIDASE 25-RELATED 2 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Plant peroxidase signature 118 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Plant peroxidase signature 33 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Plant peroxidase signature 175 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Plant peroxidase signature 52 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Plant peroxidase signature 71 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Plant peroxidase signature 191 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 Gene3D Peroxidase, domain 2 98 237 - -
Cmo03g01246 258 PRINTS Haem peroxidase superfamily signature 119 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Haem peroxidase superfamily signature 71 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 PRINTS Haem peroxidase superfamily signature 53 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cmo03g01246 258 Gene3D - 1 254 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01246 Cmo13g00766 CCT
Cmo03g01246 Cmo06g00364 CCT
Cmo03g01246 Cmo14g00193 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01246 Cmo-Chr3:9589649 Cmo13g00766 Cmo-Chr13:7421634 7.80E-99 dispersed
Cmo14g00193 Cmo-Chr14:873646 Cmo03g01246 Cmo-Chr3:9589649 1.10E-123 wgd
Cmo03g01246 Cmo-Chr3:9589649 Cmo06g00364 Cmo-Chr6:1759854 1.81E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01246 K00430 - csv:101221151 451.055