Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g01246 | ATGGTGAAGTCTTGTGATGCATCTCTTTTGTTGGAGATCAAAGAGGAAGAAGGTGGAATTGTGTCGGAGATGAAGTCGTCAAGGAGCTTTGGGATTAGAAACCTCAAATATGTTAATAAAATCAAACAGCTTCTTGAAAATGAGTGTCCCGACACTGTCTCTTGTGCTGATATTATGGCTCTTGCTGCAAGAGATGCCATTGTTCTGATAGGGGGATTAGAGATGGAGATGAAAACAGGGAGGAGAGACAGCAGAGAATGCTATGAAGGAGTGGTGGAAGACTTCATTCCTAATCATAATGATTCTCTTTCGTTGGTTCTTTCTAGGTTTCAAGATATTGGCATTGATGCTCAAGCTACCGTTGCTCTTTTAGGAGCTCACTCGGTGGGTCGGGTCCACTGCGTAAATCTAGTGAACCGGCTCTACCCGACAGTCGATCCGACTTTGGATCCGGATCATGGAGAATATCTAAAAAGAAGGTGCCCGAGCCCGAACCCGGACCCGAAGGCAGTTTTGTACGCAAGAAACGATTTGCAAACTCCGATGGTGCTGGACAACAACTACTATAAGAACGTATTGGGCCAGAAGGCCCTTTTGTTGGTGGACCAACAATTGGGCTCTAGCCCAATAACTCTTCCTTACGTCCAGCACATGGCCTCCAATAACACTTACTTTCTGGCCCAATTTGCCAGGGCTGTGCTTTTGCTGTCAGAGAACGCCCCTCTCACCGACGAAGAAGGAGAAATTAGAAAGGATTGTCGACGTGTCAACAAGTGA | 777 | 46.2 | MVKSCDASLLLEIKEEEGGIVSEMKSSRSFGIRNLKYVNKIKQLLENECPDTVSCADIMALAARDAIVLIGGLEMEMKTGRRDSRECYEGVVEDFIPNHNDSLSLVLSRFQDIGIDAQATVALLGAHSVGRVHCVNLVNRLYPTVDPTLDPDHGEYLKRRCPSPNPDPKAVLYARNDLQTPMVLDNNYYKNVLGQKALLLVDQQLGSSPITLPYVQHMASNNTYFLAQFARAVLLLSENAPLTDEEGEIRKDCRRVNK | 258 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 9589649 | 9591376 | + | CmoCh03G012460.1 | Cmo03g01246 | 378709 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g01246 | 258 | PANTHER | PEROXIDASE 21 | 2 | 255 | - | - | |
Cmo03g01246 | 258 | ProSiteProfiles | Plant heme peroxidase family profile. | 1 | 257 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | CDD | secretory_peroxidase | 2 | 256 | IPR033905 | GO:0004601|GO:0042744 | |
Cmo03g01246 | 258 | SUPERFAMILY | Heme-dependent peroxidases | 2 | 257 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | Pfam | Peroxidase | 2 | 221 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PANTHER | PEROXIDASE 25-RELATED | 2 | 255 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Plant peroxidase signature | 118 | 130 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Plant peroxidase signature | 33 | 46 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Plant peroxidase signature | 175 | 190 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Plant peroxidase signature | 52 | 62 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Plant peroxidase signature | 71 | 86 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Plant peroxidase signature | 191 | 208 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | Gene3D | Peroxidase, domain 2 | 98 | 237 | - | - | |
Cmo03g01246 | 258 | PRINTS | Haem peroxidase superfamily signature | 119 | 134 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Haem peroxidase superfamily signature | 177 | 192 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Haem peroxidase superfamily signature | 71 | 83 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | PRINTS | Haem peroxidase superfamily signature | 53 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Cmo03g01246 | 258 | Gene3D | - | 1 | 254 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo03g01246 | Cmo13g00766 | CCT | |
Cmo03g01246 | Cmo06g00364 | CCT | |
Cmo03g01246 | Cmo14g00193 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g01246 | Cmo-Chr3:9589649 | Cmo13g00766 | Cmo-Chr13:7421634 | 7.80E-99 | dispersed | |
Cmo14g00193 | Cmo-Chr14:873646 | Cmo03g01246 | Cmo-Chr3:9589649 | 1.10E-123 | wgd | |
Cmo03g01246 | Cmo-Chr3:9589649 | Cmo06g00364 | Cmo-Chr6:1759854 | 1.81E-122 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g01246 | K00430 | - | csv:101221151 | 451.055 |