Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01273 ATGGCTCGTAATCTCAGACTCCATGCACTCATAGTGCTTCTGCTTCTCGTCTCCTTCTGGACTCCATCGTGTTCGGAGTCAATTCCAACTCCTAATTCCCAATGCCAAACTCAGCTCCAACAAGGCTGCCATGACAGACCCAAGTCCCTCAAACTCAAACTCATCGCCATCGCAAACATTTTAGTTGCGAGCATGATCGGCGTTTGTCTTCCCCTGTTCTCCCGCGCGGTACCGCTGCTTCAACCAGAGGGAAGCCCCTTCGCAATCGTTAAGGCATTTGCCTCCGGCGTGATTTTAGCCACTGGGTATATGCACGTTTTGCCCGATTCGTTCAATTGCTTGACATCCCCTTGTTTGCCGGAGAACCCATGGCGGAAATTCCCTTTCACCACATTCATAGCCATGATTTCGGCTGTGATGACTTTAATGTTGGACTCGTTTTCGATGAGTCGATACAAGAAAGAGTTGATGGAGGCTCAAGTTGCAGAAGAAGAACAGAACGAGGGCATGGAAATCGATGACAACTTGGGGAGAGAAGAAGGAACCAATAAAAAACTTGGTGCGAAATTGGTACGACACCGCGTTATTGCGCAATTATTAGAAGCAGGGATCGTTGTGCATTCGGTGGTGATAGGGCTTTCAATGGGGGCTTCGGAAAATCCGTGCACCATAAGGCCGCTCATCGCTGCTCTCTGCTTCCATCAGCTGTTTGAAGGGATGGGGCTTGGAGGGTGCATTCTGCAAGCGGAATACGGGTTCAAGATGAAAGCAATCATGGTGTTGTTCTTCTCGATCACGACGCCATTTGGAATAGCATTGGGGATTGGATTGTCGAATGTGTATAGTGATAATAGTCCCACGGCTCTTATAGTTGTGGGGATTTTGAATGCTTCATCTGCTGGGTTGCTGAATTATATGGCATTGGTTGATTTGTTGGCGTTTGATTTCATGGGGCCCAAGTTGCAAGCCAATCTCACGCTTCATATATGGGCTTACGTTGCGGTTTTTCTGGGCGCTGGAGGCATGTCTTTGATGGCAAAATGGGCTTAG 1050 48.38 MARNLRLHALIVLLLLVSFWTPSCSESIPTPNSQCQTQLQQGCHDRPKSLKLKLIAIANILVASMIGVCLPLFSRAVPLLQPEGSPFAIVKAFASGVILATGYMHVLPDSFNCLTSPCLPENPWRKFPFTTFIAMISAVMTLMLDSFSMSRYKKELMEAQVAEEEQNEGMEIDDNLGREEGTNKKLGAKLVRHRVIAQLLEAGIVVHSVVIGLSMGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYGFKMKAIMVLFFSITTPFGIALGIGLSNVYSDNSPTALIVVGILNASSAGLLNYMALVDLLAFDFMGPKLQANLTLHIWAYVAVFLGAGGMSLMAKWA 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9694855 9695904 - CmoCh03G012730.1 Cmo03g01273 378736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01273 349 Pfam ZIP Zinc transporter 51 346 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cmo03g01273 349 PANTHER ZINC TRANSPORTER 7 32 349 - -
Cmo03g01273 349 PANTHER ZINC/IRON TRANSPORTER 32 349 - -
Cmo03g01273 349 TIGRFAM zip: ZIP zinc/iron transport family 35 349 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01273 Cmo-Chr3:9694855 Cmo13g00470 Cmo-Chr13:5758732 1.53E-138 dispersed
Cmo03g01273 Cmo-Chr3:9694855 Cmo18g00524 Cmo-Chr18:3822705 3.64E-139 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01273 K14709 - csv:101204028 521.931