Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01297 ATGATTATAACACACAGAACCATGTGGATCATTACTCTTCCGAGCTCGATTGGGTATTGGAGTGAAGAGAATCTGCTTTTCGATCACTCCCTTCGACGCGAATATTTCACTTCCATTTGTTCTTCCTTCTTTTCTCTTCTTCCACCCGGTGTCTCTGCACTTTCTTGCTCCATATTGTGGCAGCTTGAAGCCCTGTTCGTAACTAGGGCTTGCGACTTCACCTGCTTCCAACTTTGCTGCCACTTCCCCGGGTCTAGAAGAAACGTTAAGAGTTCTGCAATGGGAAAACATTCGAAGACCAGTTGCAAGTCGGCTTCCCACAAGCTATTTAAGGATAAGGCAAAGAACCGGGTCGATGATCTGCAAAACATATTTGTAGATTTGCAGTATGCAAGGAAGGAGAGCCGCACGGTTGATGTGTCAGTTCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAATCTGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGGTGGAAGTTTTGGGTCATTTTCATCGGACATTTGTCGATTGTTACAACTTTGTGAGGAGGATGATGATGCGTCTAGTCCATTAGCTGCTCCTAAGCCTGAACCTAAAGAACAAAATTTGCAGGTTGGAGATGCTATGGCACATCAGGAGGGATTTAATGTGAATCGTATACACCAAGAACCAAGCTTCCCTCTAGTTGATCAATGCAAGAACTCCCCATCAGGAGTTCATGGTATGGTTATGAATAACATGGAAGGACCTACACATTCGGAGTGTCATCCGTTTGATTTACAGCAAGGCATTGAGCACAACTTTTACACTATCCTTAATGCTAGAGGTTTGTGTGGAGAGGGTGCAATTCCTCATGTTTCTGGCTACTGTCCCAGCATTTGCCCTCCACCTGCTGCTTTTTTAGGCCCAAAATGTGCGCTTTGGGATTGCCCGCGACCTGCCCAAGGGATGGATTGGTGTGGGGACTACTGTAGCAGTTTTCATACTGCCTTAGCATTGAATGAAGGCCCTCCTGGAATGGGTCCGGTGTTACGACCTGGTGGCATTGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGGGCAAAGGCACAAGGGAAAGATGTTGGTATCCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAGCTTTTTGATCTGTCAATACTGGAGGGTGAGATGATTAGGGAGTGGCTATTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGAAAGCAGAGGTCTTTGCCTGATTACAGTGGACGTGGTTGGCATGAATCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCTTATTATATGGATCCTCAGCCACTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAATAAGTACGACGCCTGTGCTTTGTATCGATTGGAGCTGAAACTTGTTGATGGGAAAAAAGGTTCCAAGGCAAAGGTAACCAACGATTCAGTTACTGATTTACAGAGGCAAATGGGGAGACTGACTGCTGAATTTCCTGATAATAAACGCCTTGTGAAGGGGAGGACCAGAATTAACACAAAAGTTGGTATTGGAAATGTTTACCCCTCAGCAAATAGAGTCATGCCACCCAATGGAACATATGACTATATGCTGCATGCACAATATGATTACCTGGTGGAGAATTTGAGCGAATATTACCTTACATAG 1731 45.18 MIITHRTMWIITLPSSIGYWSEENLLFDHSLRREYFTSICSSFFSLLPPGVSALSCSILWQLEALFVTRACDFTCFQLCCHFPGSRRNVKSSAMGKHSKTSCKSASHKLFKDKAKNRVDDLQNIFVDLQYARKESRTVDVSVLEEQVHQMLREWKSELNEPSPASSLQQGGSFGSFSSDICRLLQLCEEDDDASSPLAAPKPEPKEQNLQVGDAMAHQEGFNVNRIHQEPSFPLVDQCKNSPSGVHGMVMNNMEGPTHSECHPFDLQQGIEHNFYTILNARGLCGEGAIPHVSGYCPSICPPPAAFLGPKCALWDCPRPAQGMDWCGDYCSSFHTALALNEGPPGMGPVLRPGGIGLKDGLLFAALRAKAQGKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKGSKAKVTNDSVTDLQRQMGRLTAEFPDNKRLVKGRTRINTKVGIGNVYPSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 576
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 9786940 9791897 + CmoCh03G012970.1 Cmo03g01297 378760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01297 576 PANTHER TRANSCRIPTION FACTOR VOZ1 94 576 IPR039277 GO:0006355|GO:0048578
Cmo03g01297 576 PANTHER TRANSCRIPTION FACTOR VOZ1 94 576 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01297 Cmo07g00212 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00199 Cmo-Chr2:932111 Cmo03g01297 Cmo-Chr3:9786940 3.26E-168 wgd
Cmo20g00652 Cmo-Chr20:3187678 Cmo03g01297 Cmo-Chr3:9786940 9.25E-176 wgd
Cmo03g01297 Cmo-Chr3:9786940 Cmo07g00212 Cmo-Chr7:1063694 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
9473 None None None None Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01297 - - csv:101219536 947.962