Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01375 ATGGAGGATTCGGAGGGAATCAAGCCTGGCCTGGTTTCCTTTTTGTTGGGCGTGATTCCAGTTTTTGTTGCCTGGGTATATTCAGAGTTTCTAGAGTATCAGAAGGCTCGACTTCTTTCTAAAGTTCATTCAGACATTAATCTTGTTGAATTGGGTGAGGAGAAAGGAGATAAAGTTAAAGATGATGAGGCTGCTTTGCTGGAAGGAGGCCTTGCAAGATCAGCCTCGGCAAAGTTGCATAGTTCATCAATTAAAACAAACTTAATCAGGTTTTTGACATTAGATGAGTCCTTCTTGCTGGAAAATCGGGCTACATTGAGAGCAATATCTGAATTTGGGGCAATTCTTGTGTACTTCTACGTATGTGACCGCACAAATATATTGGGAGATTCTAAGAAGAATTACAATCGGGATCTCTTCCTCTTTCTTTACATCCTTCTCATCATTGTTTCTGCAATGACGTCTTTGAAGAAACACAATGATAAATCAGCATTTTCTGGAAAGGCGATACTTTACCTAAATCGACATCAAACAGAGGAATGGAAAGGGTGGATGCAGGTTCTATTTTTAATGTACCATTATTTTGCTGCGACGGAAATTTATAATGCCATACGGGTATTTATTGCTGCTTATGTGTGGATGACTGGATTTGGAAACTTCTCCTACTATTATATTCGAAAGGATTTTAGCTTGGCACGCTTTGCTCAGATGATGTGGCGACTAAATTTCTTTGTCGCTTTTTGCTGTATTATTCTTTCCAATGACTACATGCTGTACTACATCTGTCCGATGCATACACTTTTTACTCTCATGGTGTATGGAGCTCTTGGAATTTTTAACAAGTACAATGAGATAAGATCAGTGATGATTGCAAAGATCCTTGCTTGCTTCCTTGTGGTTATTGCAGTCTGGGAAATTCCTGGAGTTTTTGACATCATCTGGAGTCCATTTACATTCCTTTTAGGGTATACTGATCCTGCAAAAGTTGATCTTCCCAAACTGCACGAGTGGCATTTTAGATCTGGTCTAGATCGCTATATATGGATCATCGGCATGATATATGCATACTATCACCCCAATGTTGAAAAATGGATGGAGAAATTGGAGGAAGCTGAAGCAAGGAAGAGAATTTCGGTCAAGACAAGCATTGTTACTGTTTCTGTTATAGCTGGTTATATGTGGTACGAGTACATTTACAAGCTGGACAAAGTGACTTACAATAAATATCATCCCTACACATCGTGGATTCCTATAACTGTTTACATTTGCTTACGAAACTTTACTCAGCAATTGCGAAGCTACTCTTTGACCCTCTTTGCGTGGCTTGGCAAGATAACGTTGGAGACCTATATTTCACAGTTCCATATATGGTTGAGATCGAATGTGTCTAATGGACAGCCAAAGTGGCTTCTCTCAATCATCCCAGAATACCCGATGCTCAACTTCATGCTTACAACTGCCATCTATGTCATAGTGTCCCTCCGGATTTTTGAATTAACCAATACACTGAAATCAACCTTTGTACCTACAAAAGATAATAGACGGTTGCTGCATAATCTCCTTGCTGGAGCTGCAATTTCTCCGAGTGGTGAAGCAAGACTAAAGATAGATATAGAAAGGAATTATGTTGAACCTCTGCTTTTCGACCACTAG 1653 39.62 MEDSEGIKPGLVSFLLGVIPVFVAWVYSEFLEYQKARLLSKVHSDINLVELGEEKGDKVKDDEAALLEGGLARSASAKLHSSSIKTNLIRFLTLDESFLLENRATLRAISEFGAILVYFYVCDRTNILGDSKKNYNRDLFLFLYILLIIVSAMTSLKKHNDKSAFSGKAILYLNRHQTEEWKGWMQVLFLMYHYFAATEIYNAIRVFIAAYVWMTGFGNFSYYYIRKDFSLARFAQMMWRLNFFVAFCCIILSNDYMLYYICPMHTLFTLMVYGALGIFNKYNEIRSVMIAKILACFLVVIAVWEIPGVFDIIWSPFTFLLGYTDPAKVDLPKLHEWHFRSGLDRYIWIIGMIYAYYHPNVEKWMEKLEEAEARKRISVKTSIVTVSVIAGYMWYEYIYKLDKVTYNKYHPYTSWIPITVYICLRNFTQQLRSYSLTLFAWLGKITLETYISQFHIWLRSNVSNGQPKWLLSIIPEYPMLNFMLTTAIYVIVSLRIFELTNTLKSTFVPTKDNRRLLHNLLAGAAISPSGEARLKIDIERNYVEPLLFDH 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10101364 10107215 + CmoCh03G013750.1 Cmo03g01375 378838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01375 550 Pfam 10 TM Acyl Transferase domain found in Cas1p 103 515 IPR012419 -
Cmo03g01375 550 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 4 527 - -
Cmo03g01375 550 PANTHER O-ACETYLTRANSFERASE FAMILY PROTEIN-RELATED 4 527 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01375 Cmo07g00133 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01375 Cmo-Chr3:10101364 Cmo07g00133 Cmo-Chr7:715010 0 dispersed
Cmo03g01375 Cmo-Chr3:10101364 Cmo18g00445 Cmo-Chr18:2928183 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01375 K03377 - csv:101215014 996.497