Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01376 ATGGCTGCTTCCACAATGGCTCTTTCTTCTCCATCACTGGCTGGTAAGGCCGTGAATCTCTCCCCCAACACCCCTGACATTCAGGGCAATGCAAGAGTCAGCATGAGGAAGACCGCCAGCAAGTCAGTTTCCTCTGGCAGCCCATGGTACGGCCCCGACCGTGTTAAGTATTTGGGCCCATTCTCCGGCGAGCCACCGTCCTACCTCACCGGAGAGTTCCCCGGTGACTACGGTTGGGACACTGCTGGACTTTCAGCCGACCCCGAGACCTTCGCCAAGAACCGTGAGCTGGAAGTGATCCACTCCAGATGGGCCATGCTCGGAGCTTTGGGCTGTGTGTTCCCCGAGCTTCTGTCCCGCAATGGCGTGAAGTTCGGCGAGGCTGTTTGGTTCAAGGCAGGATCTCAGATCTTCAGCGAGGGAGGCCTCGACTACTTGGGCAACCCCAGCCTGATCCACGCACAGAGCATTTTGGCCATCTGGGCCACTCAGGTTGTGTTGATGGGCGCCGTCGAAGGGTACCGTATTGCCGGAGGCCCACTCGGGGAGGTCGTCGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTTGCTGACGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGCTCAAGAATGGAAGGCTGGCCATGTTCTCCATGTTTGGATTCTTCGTTCAGGCCATTGTCACCGGAAAGGGTCCTTTGGAAAACTTGGCTGACCACCTTGCCGACCCAGTCAACAACAACGCATGGGCCTACGCCACAAACTTTGTTCCTGGAAAGTGA 798 57.27 MAASTMALSSPSLAGKAVNLSPNTPDIQGNARVSMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVVLMGAVEGYRIAGGPLGEVVDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10108407 10109204 - CmoCh03G013760.1 Cmo03g01376 378839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01376 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Cmo03g01376 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cmo03g01376 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Cmo03g01376 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Cmo03g01376 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01376 Cmo07g00129 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01376 Cmo-Chr3:10108407 Cmo07g00130 Cmo-Chr7:703094 0 dispersed
Cmo13g00573 Cmo-Chr13:6475233 Cmo03g01376 Cmo-Chr3:10108407 0 transposed
Cmo20g00287 Cmo-Chr20:1389168 Cmo03g01376 Cmo-Chr3:10108407 0 wgd
Cmo03g01376 Cmo-Chr3:10108407 Cmo07g00129 Cmo-Chr7:701442 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01376 K08912 - csv:101221671 525.398