Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01385 ATGAATTCGCTTCTCGCTTTTCTTTCGCCACTGCTTCCGTTCGTGGCCTCTCTTGTGTTTCTGCTCCTCTTTCTCGAGCAGATCTCTTATCTGAAGAAGAAGCGCTCTGTTCCTGGTCCTCCTCTCGTTTTCCCCTTCGTCGGCAACGCAATTCCTCTGGTCAGGAATCCTGCCCGCTTCTGGGAGATTCAGGCCTCTTTGGCTAAATCCTCCGGCGTTGGCTTCTCTGTCAACTACATAGCCGGAAACTTCATCGTCTTCATTCGCGACACTGAGCTCTCTCACAAGATTTTCGCCAATGTGCGTTCCGACGCTATGAACCTCGTCGGTCATCCCTTCGGGAAGAAGCTTTTCGGTGAGGATAATCTGATTTACATGTTAGGCCAAAAGCATAAGGATCTGCGCCGTCGAATCGCTCCTAATTTCACGCCCAAAGCGCTCACCACATACACCGCGCTTCAGCAGATCATTATTCTAAAGCATTTGAAACTTTGGGATCAGAAGTCGTCGGAGTCCTCGCCGAAGCCGATTCCCTTGAGGTTTCTGGCTCGAGATCTTAACCTCGAAACCTCTCAGATGGTGTTCGTCGGGCCGTATTTAGGCGAAAAGGTTCGCGAGAAGTTCAGAGTCGATTACAACCTCTTCAATGTCGGCCTGATGAAACTTCCAATCGACTTGCCTGGAACAGGTTTTAGAAACGCGAGACTCGCCGTCAACCGGCTGGTAGAGGTCCTTGCCGACTGCGCTGAGAAGAGCAAGGTGAAGATGAAAAGAGAAGAAGAGCCGTCGTGTTTGATAGACTTTTGGATGCAGGACACCGTGAAGGAACTCGAGGCTGCAGCGGCGGCTGGCGAGGCGGAGCCCGTTCACACCAGTAACTACGAGCTCGGGCTGTATCTCTTCGATTTCCTCTTCGCCGCTCAAGACGCTTCAACTTCGTCGCTTCTGTGGGCCGTCAGTCTCCTCGACTCGCATCCCGAGGTGGTCGCCATAGTTCGGGACGAGGTCAAATCAATCTGGTCGCCGGAATCTGACTCACTGATCTCATCAGAGCAGCTTCTGGAAATGAAGTACACTCAGGCAGTGGCCCGTGAAGTGGTCCGGTACCGCGCTCCGGCAACCGTGGTGCCGCACGTGGCGGCGGCGGAGTTCCCGTTGACTAATTCATACACGATTCCAAAAGGCGCAATCGTGTTCCCATCTGCGTACGAGTCGAGCTTCCAGGGTTTCATCGAACCGGAGCGGTTCGATCCGGACCGGTTCTCGGAGGAAAGGCAAGAGGACCGAATTTTCAAAAGAAACTTTCTGGCATTCGGTGCTGGGTCCCACCAGTGTGTTGGGCAACGGTACGCCTTAAACCAACTGGTTCTCTTCATCGCCATGTTTTGTTCGTTACTTGATTTCAAGCGGCACAGATCTGACGGCTGTGATGAAATCGCCTTCAATCCCACTATCTGTCCCAAAGATGACTGCATGGTCTCCATCTCCCGGCGGTGCCCTCGATTCCCCAATCTCTCGCTTTAA 1524 52.95 MNSLLAFLSPLLPFVASLVFLLLFLEQISYLKKKRSVPGPPLVFPFVGNAIPLVRNPARFWEIQASLAKSSGVGFSVNYIAGNFIVFIRDTELSHKIFANVRSDAMNLVGHPFGKKLFGEDNLIYMLGQKHKDLRRRIAPNFTPKALTTYTALQQIIILKHLKLWDQKSSESSPKPIPLRFLARDLNLETSQMVFVGPYLGEKVREKFRVDYNLFNVGLMKLPIDLPGTGFRNARLAVNRLVEVLADCAEKSKVKMKREEEPSCLIDFWMQDTVKELEAAAAAGEAEPVHTSNYELGLYLFDFLFAAQDASTSSLLWAVSLLDSHPEVVAIVRDEVKSIWSPESDSLISSEQLLEMKYTQAVAREVVRYRAPATVVPHVAAAEFPLTNSYTIPKGAIVFPSAYESSFQGFIEPERFDPDRFSEERQEDRIFKRNFLAFGAGSHQCVGQRYALNQLVLFIAMFCSLLDFKRHRSDGCDEIAFNPTICPKDDCMVSISRRCPRFPNLSL 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10142287 10143810 - CmoCh03G013850.1 Cmo03g01385 378848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01385 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Cmo03g01385 507 Pfam Cytochrome P450 38 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 PANTHER CYTOCHROME P450 26 14 495 - -
Cmo03g01385 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 Gene3D Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo03g01385 507 PANTHER CYTOCHROME P450 61 14 495 - -
Cmo03g01385 507 SUPERFAMILY Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01385 Cmo-Chr3:10142287 Cmo14g02010 Cmo-Chr14:14732173 2.15E-32 dispersed
Cmo03g01385 Cmo-Chr3:10142287 Cmo07g00115 Cmo-Chr7:648809 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01385 K09832 - csv:101221194 909.827