Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01453 ATGGGGAAGTTTCAAATCCGGAAATTCTTGATTCCTCTACTACTTCTGATAATTTTTGAGTATCTACTAACTGGAGACGCCAAAACCAATTCTCTTTTCATCAACTGTGGCTCAAGCTCAAACGAAACTGCTGATGGGCGGAAATGGATTGGCGACCTGACTTCCGAAGTGAACTTTTCCGTGGGTAATCTTGGTGCTAATGTCAATGCCTCCACTGACACTTTAAACGGCGATTCAGTCTTTGAGCCGCTGTACAAAACTGCTCGAATATTTACTAATTCCCTGAACTATACTTTTAAAGGCGTTTGGGGTAATCATTTGGTTCGCCTCCATTTCTGCCCCTTTCCTTTTGAGAACTTCAATGTGAACGAGTCATCATTTTCTGTCTCAGCAAATGGTCTTAGACTGGTTTCAGAGTTCAGCGTTCCCAATGAGATTGCATATAAGAATATGGAGTTTCAGCGTTCTGGGGTCAATTCAAGTTCATTCTCTTTGATTAAAGAGTTCATTATTTCTGTCAATTCAGAAGCATTTGTTCTTGAGTTCTCCCCTTCTGGAGGATCATTTGGGTTCATTAATGCTATTGAAATCGTCCCCCTGGTGAATGAGCTTTTTGCAGGTTCGATTGATAAGGTGGGTGGAAGTGCTGTTAGTTTGAATGTGAGTGAAAGGGGAGCTGAAACTATGTACAGATTGAATGTTGGAGGTTCGGTGATCAAGCCCACTCAAGATTCAAATCTTTGGAGAATGTGGGAAGTGGACTCAAGTTATATGATTACAGCAGATGCTGGGTCGGAGATACATAACAGTTCTAATGTAACGTATGCTTCCATGAATGACTCCATTGTAGCTCCTCTCCCTGTGTATGAAACAGCCAGAACGATGTCCGAGACTGAAGTGCTCGAGAAAAGATTTAACATGTCGTGGAAATTTGAAGTTCATCCTGGTTTCGAATATTTGATTAGATTACATTTCTGTGAGCTGCTGTATGACAAGGCAAGAGAGAGGGTTTTCAAGATTTACATAAACAATCGAACTGCAATTGAGAGTTTTGATGTGTTTGTACGAGCGGGGGGGATGAACAGAGCATATCATGTGGATTTTCTTGAACCAATATCGTCCAAAATCAACACCCTTTGGATTCAACTAGGCCCTGATACGGCTGCAGGTGCTGCCGGAACAGATGCTCTCTTGAATGGTCTGGAAATATTTAAGCTGAGTCAAAATGGGAATCTTGCGTTCATTGACAGGTTTAATGCCTTGGAAGAGTCCATGGGAAACTCGAAATCTCAAATTCTTTGGATAGGCATTGGAGCAGGTTTGGCATCTGTTGTTTTCCTTGCTGTTATTGTCATTCTCACCATCTATTTCTGCAGACACCGGAGGAGGAATTTTACTAAGAAGAACTCTTCTAAGTGGAGAGCAGGATCCAGTCATGGGGCCACTGTCACCAGCACCTTGGGGGGAGGCCAAAGTGTATTTGGGACCCTGCCATCTACCAGAGTTGGCAAATGGTTTACATTAGCAGAGATTCTTGCAGCAACAGATAACTTTGATGAAGCTCTGATGATCGGAGTTGGCGGTTTTGGTAAGGTCTACAGAGGGGAGATTGACGATGGTACTCTTGTGGCAATCAAGAGAGCAAACCCGCAGTCTCAGCAGGGACTTGCCGAGTTCGAGACCGAAATTGAAATGCTTTCTAAACTTAGGCATAGGCATCTGGTCTCCATGATCGGCTTTTGCGACGAGCAAAAGGAAATGATCTTGGTTTACGAATACATGGCGAATGGCACTTTAAGAAGCCATCTCTTTGGGAGTGATCTCCCACCTTTGACATGGAAGCAGCGATTGGAAGTGTGCATTGGTGCAGCCAGGGGACTCCATTACCTTCACACAGGAGCTGAGAGAGGAATAATCCACAGAGATGTGAAGACGACCAACATACTCTTGGATGAGAACTTTGTTGCAAAAATGTCTGATTTTGGTCTTTCAAAAACAGGTCCTGCTTTGGATCATACCCATGTTAGTACTGCAGTTAAGGGCAGCTTTGGCTACCTCGATCCAGAGTATTTCAGGCGCCAGCAGTTGAGTGAAAAATCTGATGTCTATTCTTTTGGTGTGGTATTGTTAGAAGTTGTTTGTGCACGAGCTGTTATAAACCCAACTTTGCCCAAGGATCAGATAAATCTTGCAGAATGGGCAATGAAATGGCAGCGCAAAAAGTTGCTGCACACCATCATAGACTCACATCTCAAAGACAAGTATTGCCCTGAGTCTCTTAAAACATTTGGAGAGATAGCAGAAAAATGCCTTGCTGATGAAGGCAAGATTCGTCCAACAATGGGGGAAGTTCTATGGCACCTAGAATTTGCTATGCAACTCCATGATGCTTGGATCCGCACCAATGATGCTCAAAGTTCTTGCACAGTAAACTCAGAAGGAGCCCAAGCTGAGGAACAGAGGGTAGAAGTTGATCGGGAAGAGGAAAGCTCCAGCTTGAAAGCTTCAACTCCAACTGATCACTTATCCTAA 2532 43.56 MGKFQIRKFLIPLLLLIIFEYLLTGDAKTNSLFINCGSSSNETADGRKWIGDLTSEVNFSVGNLGANVNASTDTLNGDSVFEPLYKTARIFTNSLNYTFKGVWGNHLVRLHFCPFPFENFNVNESSFSVSANGLRLVSEFSVPNEIAYKNMEFQRSGVNSSSFSLIKEFIISVNSEAFVLEFSPSGGSFGFINAIEIVPLVNELFAGSIDKVGGSAVSLNVSERGAETMYRLNVGGSVIKPTQDSNLWRMWEVDSSYMITADAGSEIHNSSNVTYASMNDSIVAPLPVYETARTMSETEVLEKRFNMSWKFEVHPGFEYLIRLHFCELLYDKARERVFKIYINNRTAIESFDVFVRAGGMNRAYHVDFLEPISSKINTLWIQLGPDTAAGAAGTDALLNGLEIFKLSQNGNLAFIDRFNALEESMGNSKSQILWIGIGAGLASVVFLAVIVILTIYFCRHRRRNFTKKNSSKWRAGSSHGATVTSTLGGGQSVFGTLPSTRVGKWFTLAEILAATDNFDEALMIGVGGFGKVYRGEIDDGTLVAIKRANPQSQQGLAEFETEIEMLSKLRHRHLVSMIGFCDEQKEMILVYEYMANGTLRSHLFGSDLPPLTWKQRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPALDHTHVSTAVKGSFGYLDPEYFRRQQLSEKSDVYSFGVVLLEVVCARAVINPTLPKDQINLAEWAMKWQRKKLLHTIIDSHLKDKYCPESLKTFGEIAEKCLADEGKIRPTMGEVLWHLEFAMQLHDAWIRTNDAQSSCTVNSEGAQAEEQRVEVDREEESSSLKASTPTDHLS 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10495984 10498515 + CmoCh03G014530.1 Cmo03g01453 378916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01453 843 Pfam Malectin-like domain 34 405 IPR024788 -
Cmo03g01453 843 SMART serkin_6 518 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g01453 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Cmo03g01453 843 MobiDBLite consensus disorder prediction 818 834 - -
Cmo03g01453 843 ProSiteProfiles Protein kinase domain profile. 518 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo03g01453 843 CDD STKc_IRAK 524 789 - -
Cmo03g01453 843 Pfam Protein tyrosine and serine/threonine kinase 523 785 IPR001245 GO:0004672|GO:0006468
Cmo03g01453 843 PANTHER OSJNBA0058K23.13 PROTEIN 21 829 - -
Cmo03g01453 843 MobiDBLite consensus disorder prediction 809 843 - -
Cmo03g01453 843 SUPERFAMILY Protein kinase-like (PK-like) 497 792 IPR011009 -
Cmo03g01453 843 Gene3D - 27 200 - -
Cmo03g01453 843 Gene3D - 224 408 - -
Cmo03g01453 843 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Cmo03g01453 843 Gene3D Phosphorylase Kinase; domain 1 495 593 - -
Cmo03g01453 843 Gene3D Transferase(Phosphotransferase) domain 1 594 813 - -
Cmo03g01453 843 PANTHER OS07G0166700 PROTEIN 21 829 IPR045272 GO:0004714|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01453 Cmo07g00058 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01453 Cmo-Chr3:10495984 Cmo09g00879 Cmo-Chr9:4556558 0 dispersed
Cmo16g00379 Cmo-Chr16:1744813 Cmo03g01453 Cmo-Chr3:10495984 2.27E-75 dispersed
Cmo03g01453 Cmo-Chr3:10495984 Cmo07g00058 Cmo-Chr7:341576 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74218 PF12819 Malectin_like 3.40E-32 CL0202 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01453 - - bhj:120073088 1533.08