Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01461 ATGGTCGGAGGCTTTGAAGTGGGAGCTGTTCCCTACAACCCGGACGGTTGGGGTCCGCCGGACTCTACCGATTCTCTCGTCGCTTCCTCCAACCTCCCTCTCAATGTTCCCTTCGCTCCCTTCTCTCGCTCCGATAGGCTTGGCCGGATCGCTGATTGGACCCGAACTATGAATAACCCTGGTCGCCCCAAGACTGCTTCCGATTCCGTCTTCGACTTCACCAATGACGATTCCTTCCCAGCCAATGCGGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGTCCCAAATTTGGCCCTAAATGGCGATTCAACCAACAAAGGACGCAGCTACCTCAGCGCCGTGACGAAGAAGTTGAAGCTCGGAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGATCGTCTTTACAACCTCAATAGGTCTAATGTCAATGCCCCCCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTGGAAATTCAACCCGAATGGAACATGCTTGATCAGATTCCCTTCTCCACGTTCTCGAAGCTGTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGTGCATACGACCGAATCACTCCCAAGAACGAGCGCCGCCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACAGACGACCCTGTCATTCGTCGTCTTGCTAATGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTTCCCTTATGTGCGCAACCAGATCGGTTTACTCCTGGGATATTGTGGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTCCCGTCCACGAGACTTCTCAGGAACCCTTGCCAGAAGCGAAGGACGATATCAATTCAGCTTACTCACTGAGTGTTGAAGCTGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTGGTTAGGGACGGAAGTAAGGTGGCCTTCGATGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTCGCTTCTGTTGCTTATAGGTATAGGAGATGGAAGCTCGATGATGATATGTATCTTGTGGCGAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAAAGATCATTTTTGACTCTGAATGCTCTTAATGAATTTGATCCCAAATATTCTGGTGTCGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTGTTGGCCACTGAGTTGAAGAACAATGCTAATAAATTGGCAAAATGGACAGCTCAAGCTCTGTTGGCTAGCGCAGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGCGATCACTTCAACCATGTCATCTTAGCCGTTGTTGGATATAAACCTAAGGATTTTGCAGCTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTCAAGTCTATCGTGGATTTGTGCATGAAATTGAACGAAGGCAAGTATGTTTTGGTCAAGGACCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCACCAGGAGAAGATGAAAATGGTGTCACTGTTAATGCAGGGACGGATGATGCAGAAGAGAAGGCTCTATTCGCTATGCAGCTTTCACCGGAGAAGATGCTTGCTAGTCTTGGAGAAGTTCTCAATCTGCTTTGTTATTTGGCTGCTTACTTTTAG 1773 48.51 MVGGFEVGAVPYNPDGWGPPDSTDSLVASSNLPLNVPFAPFSRSDRLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSSLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLPVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGSKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGVTVNAGTDDAEEKALFAMQLSPEKMLASLGEVLNLLCYLAAYF 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10521434 10523699 - CmoCh03G014610.1 Cmo03g01461 378924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01461 590 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cmo03g01461 590 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 557 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cmo03g01461 590 Coils Coil 118 138 - -
Cmo03g01461 590 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cmo03g01461 590 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 6 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
Cmo03g01461 590 MobiDBLite consensus disorder prediction 114 134 - -
Cmo03g01461 590 MobiDBLite consensus disorder prediction 88 134 - -
Cmo03g01461 590 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 4 557 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01461 Cmo-Chr3:10521434 Cmo07g00050 Cmo-Chr7:318886 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01461 K03251 - csv:101208923 1082.78