Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g01461 | ATGGTCGGAGGCTTTGAAGTGGGAGCTGTTCCCTACAACCCGGACGGTTGGGGTCCGCCGGACTCTACCGATTCTCTCGTCGCTTCCTCCAACCTCCCTCTCAATGTTCCCTTCGCTCCCTTCTCTCGCTCCGATAGGCTTGGCCGGATCGCTGATTGGACCCGAACTATGAATAACCCTGGTCGCCCCAAGACTGCTTCCGATTCCGTCTTCGACTTCACCAATGACGATTCCTTCCCAGCCAATGCGGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCGCGTCCCAAATTTGGCCCTAAATGGCGATTCAACCAACAAAGGACGCAGCTACCTCAGCGCCGTGACGAAGAAGTTGAAGCTCGGAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGATCGTCTTTACAACCTCAATAGGTCTAATGTCAATGCCCCCCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTGGAAATTCAACCCGAATGGAACATGCTTGATCAGATTCCCTTCTCCACGTTCTCGAAGCTGTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGGCTAGAGTTCTATGATCGTGCATACGACCGAATCACTCCCAAGAACGAGCGCCGCCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACAGACGACCCTGTCATTCGTCGTCTTGCTAATGAGGACAAAGCCACAGTTTTTGCTACCGATGCCATCCTTTCTTCCCTTATGTGCGCAACCAGATCGGTTTACTCCTGGGATATTGTGGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGGTCGCAACTTGATTTGCTTCCCGTCCACGAGACTTCTCAGGAACCCTTGCCAGAAGCGAAGGACGATATCAATTCAGCTTACTCACTGAGTGTTGAAGCTGCTTACATTAATCAGAACTTCTCGCAGCAAGTTTTGGTTAGGGACGGAAGTAAGGTGGCCTTCGATGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTCGCTTCTGTTGCTTATAGGTATAGGAGATGGAAGCTCGATGATGATATGTATCTTGTGGCGAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAAAGATCATTTTTGACTCTGAATGCTCTTAATGAATTTGATCCCAAATATTCTGGTGTCGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTGTTGGCCACTGAGTTGAAGAACAATGCTAATAAATTGGCAAAATGGACAGCTCAAGCTCTGTTGGCTAGCGCAGATATGATGAAGTTGGGGTATGTCTCTAGGGTTCATCCTCGCGATCACTTCAACCATGTCATCTTAGCCGTTGTTGGATATAAACCTAAGGATTTTGCAGCTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTCAAGTCTATCGTGGATTTGTGCATGAAATTGAACGAAGGCAAGTATGTTTTGGTCAAGGACCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCACCAGGAGAAGATGAAAATGGTGTCACTGTTAATGCAGGGACGGATGATGCAGAAGAGAAGGCTCTATTCGCTATGCAGCTTTCACCGGAGAAGATGCTTGCTAGTCTTGGAGAAGTTCTCAATCTGCTTTGTTATTTGGCTGCTTACTTTTAG | 1773 | 48.51 | MVGGFEVGAVPYNPDGWGPPDSTDSLVASSNLPLNVPFAPFSRSDRLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSSLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLPVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGSKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGVTVNAGTDDAEEKALFAMQLSPEKMLASLGEVLNLLCYLAAYF | 590 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 10521434 | 10523699 | - | CmoCh03G014610.1 | Cmo03g01461 | 378924 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g01461 | 590 | Hamap | Eukaryotic translation initiation factor 3 subunit D [EIF3D]. | 3 | 529 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo03g01461 | 590 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 | 4 | 557 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo03g01461 | 590 | Coils | Coil | 118 | 138 | - | - | |
Cmo03g01461 | 590 | PIRSF | Transl_init_eIF3d | 1 | 547 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo03g01461 | 590 | Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | 6 | 517 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Cmo03g01461 | 590 | MobiDBLite | consensus disorder prediction | 114 | 134 | - | - | |
Cmo03g01461 | 590 | MobiDBLite | consensus disorder prediction | 88 | 134 | - | - | |
Cmo03g01461 | 590 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D | 4 | 557 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g01461 | Cmo-Chr3:10521434 | Cmo07g00050 | Cmo-Chr7:318886 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g01461 | K03251 | - | csv:101208923 | 1082.78 |