Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo03g01474 ATGGATATCATTCACCGTGCACGTCTACTATGCGCTGTTGTATGTTTTGGGATGTTTATATGCGCATCTTGTCTGGACGAATTCGGGGATTCAACAGCCGTGTACATTGTAACCCTCAAGGAACCTCCTCCTACTACTCATTACTATGGTCAGCTTAGGCAGAATACCACTTCTTTTAGGCTCGGTGCTTCTGGTGGATTAAGCATCCACAAACCAAGAAACATATCAAGAAAGCATCGAAGATATAGATCTTATATAGCTCGAGTTCATGATTCATTGTTGAAGAAGGTCTTGAAGGGGGAGAAATACTTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTCGCTGTGCTTGTTACTGAAGAACAGGCTAATAAACTTTCAAAGAGAAAGGAGGTGGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCGCAGTTCTTGGGGCTTCCTCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAAAGTGCTGGAGCTGGGATTGTGATAGGGTTCGTTGACACTGGCATTGACCCTTCTCACCCCAGCTTTGCTGATGATTTGAGTGATAAACCATTTCCAGTTCCACCCCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGGTCATGCAATCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCTTCACCATTTGATGGTGATGGGCATGGCACGCACACAGCTTCCATTGCTGCTGGAAACCATGGCATTCCAGTGCTAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCGCACATTGCTGTTTATAAGGCACTGTACAAAAGCTTTGGAGGTTTTGCTGCGGATGTTGTTGCTGCAGTCGATCAGGCTGCTCAGGATGGGGTGGATATAATAAGTTTATCAATCACACCGAACAGGCGTCCCCCGGGTATTGCAACGTTTTTTAATCCCATAGATATGGCATTGCTCTCTGCTGTAAAGGCTGGTATATTCGTTGTGCAAGCAGCTGGTAACACTGGTCCAGCACCTAAGAGCATGTCTTCCTTCAGTCCATGGATCTTCACTGTTGGGGCTGCTTCTCACGACAGAAGCTATGCTAACTCGATAAGCCTTGGCAATAACGTCACCATCCCGGGAGTCGGACTTGCTCCTGGAACTTATAATGGCACAAAGAACAAACTAATTGCTGCAATACACGCTTTGAACAATGGGACAAACGTGTCGGCGGACATGTACGTGGGCGAATGCCAAGACTCCAGTAACTATGATCAGGATCTGATCCAAGGGAACCTTCTAATATGCAGCTACTCAATCAGATTTGTGCTGGGGCTTTCCACAGTTAAACAAGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATACCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATATTACAATTCTTCCCTGGAAGTAGATGGATTAACAAAGAGAATTTCAAAATTTGGAGCTGTTGCTAGCATATGTGGGGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATCATGTACTATTCTGCTAGAGGACCAGACCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCCAACTTGGTAGCTCCTGGAAATTCCATATGGGCTGCTTGGAGCTCTGTTGCCACTGACTCTATTGAATTTCTCGGTGAAAGCTTTGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGTCTAGCCTCACTGGTAAAGCAGAAGTACTCCAGTCTTAGTCCTTCAGCCATTGCATCTGCACTATCCACAACTGCTTCTCTTTACGACAAGACTGGTGGACCAATCATGGCTCAGCGTGCTTATGCTAATCCCGAACAGAACCAGTCTCCAGCTACGCCTTTTGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCGACCCAGGGTTGATCTTTGATTCCAGTTACGATGATTATATGTCGTTTCTTTGTGGAATCAATGGATCATCCCCTGTGGTATTCAACTACACAGGCCAGAACTGCGGGCTTTACAATTCCAGTATCAGTGGAGCTGATTTGAACTTGCCCTCTGTGACCATAGCAAAACTTAACCAGTCAAGAGTAGTGCAACGAACCGTGACCAACATAGCTGGACCTGAGATTTATAATGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCAACTCGATTTACAATCGACAGCGGCAAGAAACAAGAGCTAACCATATTCTTGAATGCGACAATGAACAGCTCGGTTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAGTGCAGGCCATATAATCAACATTCCTGTTTCAGTAATTTTGAAGATCTCATATAACAACACTACTAATTGA 2535 44.54 MDIIHRARLLCAVVCFGMFICASCLDEFGDSTAVYIVTLKEPPPTTHYYGQLRQNTTSFRLGASGGLSIHKPRNISRKHRRYRSYIARVHDSLLKKVLKGEKYLKLYSYHFLINGFAVLVTEEQANKLSKRKEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVIGFVDTGIDPSHPSFADDLSDKPFPVPPHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSISLGNNVTIPGVGLAPGTYNGTKNKLIAAIHALNNGTNVSADMYVGECQDSSNYDQDLIQGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKRISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNSIWAAWSSVATDSIEFLGESFAMMSGTSMAAPHIAGLASLVKQKYSSLSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALDPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSISGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEIYNVGWSAPYGISLKVSPTRFTIDSGKKQELTIFLNATMNSSVASFGRIGLFGSAGHIINIPVSVILKISYNNTTN 844
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 10565873 10570246 + CmoCh03G014740.1 Cmo03g01474 378937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo03g01474 844 ProSitePatterns Serine proteases, subtilase family, serine active site. 617 627 IPR023828 -
Cmo03g01474 844 CDD PA_subtilisin_like 392 527 - -
Cmo03g01474 844 CDD Peptidases_S8_3 146 653 IPR034197 -
Cmo03g01474 844 SUPERFAMILY Subtilisin-like 146 698 IPR036852 GO:0004252|GO:0006508
Cmo03g01474 844 Pfam Subtilase family 171 664 IPR000209 GO:0006508|GO:0008236
Cmo03g01474 844 PRINTS Subtilisin serine protease family (S8) signature 171 190 IPR015500 -
Cmo03g01474 844 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Cmo03g01474 844 PRINTS Subtilisin serine protease family (S8) signature 616 632 IPR015500 -
Cmo03g01474 844 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 837 - -
Cmo03g01474 844 ProSiteProfiles Serine proteases, subtilase domain profile. 151 694 - -
Cmo03g01474 844 Gene3D - 711 835 - -
Cmo03g01474 844 Gene3D - 386 554 - -
Cmo03g01474 844 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 837 IPR045051 -
Cmo03g01474 844 Pfam Peptidase inhibitor I9 34 146 IPR010259 -
Cmo03g01474 844 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 176 187 IPR023827 -
Cmo03g01474 844 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 144 IPR037045 -
Cmo03g01474 844 Pfam Fibronectin type-III domain 740 833 IPR041469 -
Cmo03g01474 844 Gene3D Peptidase S8/S53 domain 173 707 IPR036852 GO:0004252|GO:0006508
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01474 Cmo18g00546 CCT
Cmo03g01474 Cmo07g00039 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01474 Cmo-Chr3:10565873 Cmo12g00913 Cmo-Chr12:8405049 0 dispersed
Cmo18g00547 Cmo-Chr18:4242328 Cmo03g01474 Cmo-Chr3:10565873 6.08E-42 dispersed
Cmo03g01474 Cmo-Chr3:10565873 Cmo07g00039 Cmo-Chr7:270776 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo03g01474 - - bhj:120074717 1576.22