Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo03g01486 | ATGGCTCCGGGCCTCAGAGACCTCCAGCTTGCCCAGGTCGCCGCCGCTGACCGTCGCCTGCCGGATATTTCTTCTGCTGCTGCTGAACTTTCCGATGATCTTGAGGATGTGCGTTTGCTTGATTCCTATGAGAAGCAGGAGGAGAATTTGGGCGAAATTAAGAAAGGTCTGAGGAGGGTTCAGGTCTCAGTTTCTGGGATGACCTGCGCTGCTTGTTCTAATTCCGTGGAGGCTGCTTTGAGGGGCGTTAATGGCGTTTTGACGGCTTCCGTTGCATTGCTTCAGAACAGAGCTGACGTTGTTTTTGACTCCAGCTTGGTTAAGGTTTTTGAAGAAGATATCAAAGAAGCAATAGAAGATGCTGGATTCGAGGCTGAGATTATACCTGAAGCTCCTTCAGTTGGAAAGAAGTCGCATGGAACACTGGTGGGTCAATTTACCATCGGTGGTATGACATGTGCAGCATGTGTGAATTCGGTAGAGACCATTTTAAGAGATCTTCCTGGTGTTAGAAGAGCAGTAGTTGCTTTGGCCACATCATTGGGAGAAGTTGAATATGATCCTACAATTTCCAGTAAAGACGACATAGTTAATGCAATTGAGGATGCTGGATTTGAAGCTTCATTTGTACAGAGCAGTGAGCAAGATAAACTTTTACTAGCGGTTGCAGGCATTGCTGGCGAGGTTGATGTACAGTTTCTGGAAGTCATACTTAGCAACTTGAAAGGGTTGCGGCGGTTTCTCTTTGACAGTACATCAGGAACACTTGAGGTTATTTTTGACCCAGTAGTTGTTGGTCCCAGATCCTTAGTGGATGAGATTGAGGGAAGAAGCAACAGAAAATTTAAACTGCATGTTACCAGCCCTTACACGAGGTTAACGTCTAAAGATGTTGAAGAAGCTACGAAAATGTTTTGGCTCTTTATCCCCAGTCTGTTTCTCAGTGTACTGATCTTTCTCCAACAAGTAATATGTCCTCATATTCCTTTAATCTACGCATTGTTACTCTGGCGCTGTGGACCCTTTCTCATGGATGATTGGTTAAAGTGGGCATTGGTGACTGTTGTGCAATTCATCATTGGAAAGCGCTTTTATGTTGCAGCTGCTAGAGCTCTTCGAAATGGTTCAGCTAACATGGATGTCTTGGTTGCTTTGGGTACCACGGCCTCTTATGTCTATTCTGTTTGTGCACTTCTCTATGGTGCAGTCACCGGATTCTGGTCTCCTACTTATTTTGAAACAAGTGCTATGTTGATAACCTTTGTATTATTGGGAAAGTACTTGGAGTGTCTTGCCAAGGGGAAAACATCAGATGCCATCAAGAAGTTGGTAGAACTTGCTCCTGCAACTGCTTTATTGCTCATCCGGGATAAAGGTGGGAATTTGATAGAAGAAAGGGAAATAGATGCTCTGTTAATTCAACCTGGCGACATGTTGAAAGTTCTTCCTGGTACAAAGATTCCAGCGGATGGTGTTGTTAATTGGGGTTCCAGTTATGTTAATGAGAGTATGGTTACTGGAGAATCTGTACCTGTTTTGAAGGAGGTTAACTCACATGTTATTGGGGGTACAATTAACTTTCATGGAGCTCTTCACATCCAAGCAACGAAAGTAGGATCTGATACAGTTTTGAATCAGATTATTAGTTTGGTTGAGACAGCTCAGATGTCTAAAGCCCCAATTCAGAAGTTTGCTGATTTTGTAGCAAGTATATTCGTTCCTACCGTTGTTGCTATAGCATTGTGTACGTTATTTGGCTGGTATGTTGGAGGAATTCTTGGGGCTTATCCAGCTGAATGGCTCCCAGAAAATGGAAATTACTTCGTATTTTCCCTCATGTTTGCAATAGCAGTGGTAGTTATTGCATGTCCTTGTGCACTAGGCTTGGCCACGCCGACTGCTGTCATGGTTGCTACAGGGGTTGGTGCCAGCAATGGTGTCTTGATCAAAGGAGGAGACGCTTTGGAGAGGGCCCAAAAGGTTAAGTACGTGATTTTTGATAAAACAGGCACACTAACCCAAGGGAGAGCCACCGTCACTACTGCCAAAGTATTCACTGAAATTTCTCTAGGAGATTTTCTTAAGCTGGTTGCTTCAGCAGAGGCTAGCAGCGAACACCCTTTGGGAAAAGCTATAGTCGAGTATGCACGACATTTCCATTTCTTCGATGATCCTTCTGCAACAAAAAATGGGGAAAACCAAAGTAGAGAATCTTCTGGATGGCTTTTCGATGTCACAGATTTCTCTGCATTGCCAGGCCAAGGCATCCGGTGCGTTATTGAGGGAAAAAGGATTCTGGTTGGCAACAGGAAGTTGATGAATGAAAATGGAATCTCCATAGCACCTGATGTAGATAATTTCGTTATAGAGCTTGAAGAAAGTGCAAAGACAGGCATTCTTGTTGCATGCAATGATGACTTAATTGGAGTTTTGGGAATAGCAGATCCACTTAAGCGAGAAGCTGCCGTTGTTGTTGAGGGTCTTGTGAAAATGGGTGTTTCTCCAGTCATGGTTACGGGTGATAATTGGAGAACAGCTCGGGCTGTTGCCAAAGAGCTTGGTATAACAGATGTGAGGGCAGAAGTAATGCCGGCAGGAAAAGCCGAAGTGATTCACAACTTCCAAAAGGACGGAAGCACAGTTGCAATGGTAGGAGACGGTATCAACGACTCGCCTGCTCTCGCTGCATCTGATATCGGAATCGCAATTGGTGCGGGAACTGATATTGCCATTGAGGCAGCAGACTTTGTCCTGATGAGAAATAATTTAGAAGATGTAATTACAGCCATCGATCTGTCAAGGAAGACTTTCAATCGAATTCGGTTGAATTACGTGTTTGCAATGGCGTACAATGTAATAGCAATTCCTGTTGCTGCCGGAGTCCTGTTTCCTTCTTTGGGGATTAAATTGCCTCCATGGGCAGCCGGTGCATGCATGGCTTTGTCATCTGTAAGTGTCGTTTGCTCTTCTTTACTTCTTAGGAGATACAAAAGGCCAAGACTTACAACAATACTTAAAATAACTGTAGAATAG | 3033 | 44.08 | MAPGLRDLQLAQVAAADRRLPDISSAAAELSDDLEDVRLLDSYEKQEENLGEIKKGLRRVQVSVSGMTCAACSNSVEAALRGVNGVLTASVALLQNRADVVFDSSLVKVFEEDIKEAIEDAGFEAEIIPEAPSVGKKSHGTLVGQFTIGGMTCAACVNSVETILRDLPGVRRAVVALATSLGEVEYDPTISSKDDIVNAIEDAGFEASFVQSSEQDKLLLAVAGIAGEVDVQFLEVILSNLKGLRRFLFDSTSGTLEVIFDPVVVGPRSLVDEIEGRSNRKFKLHVTSPYTRLTSKDVEEATKMFWLFIPSLFLSVLIFLQQVICPHIPLIYALLLWRCGPFLMDDWLKWALVTVVQFIIGKRFYVAAARALRNGSANMDVLVALGTTASYVYSVCALLYGAVTGFWSPTYFETSAMLITFVLLGKYLECLAKGKTSDAIKKLVELAPATALLLIRDKGGNLIEEREIDALLIQPGDMLKVLPGTKIPADGVVNWGSSYVNESMVTGESVPVLKEVNSHVIGGTINFHGALHIQATKVGSDTVLNQIISLVETAQMSKAPIQKFADFVASIFVPTVVAIALCTLFGWYVGGILGAYPAEWLPENGNYFVFSLMFAIAVVVIACPCALGLATPTAVMVATGVGASNGVLIKGGDALERAQKVKYVIFDKTGTLTQGRATVTTAKVFTEISLGDFLKLVASAEASSEHPLGKAIVEYARHFHFFDDPSATKNGENQSRESSGWLFDVTDFSALPGQGIRCVIEGKRILVGNRKLMNENGISIAPDVDNFVIELEESAKTGILVACNDDLIGVLGIADPLKREAAVVVEGLVKMGVSPVMVTGDNWRTARAVAKELGITDVRAEVMPAGKAEVIHNFQKDGSTVAMVGDGINDSPALAASDIGIAIGAGTDIAIEAADFVLMRNNLEDVITAIDLSRKTFNRIRLNYVFAMAYNVIAIPVAAGVLFPSLGIKLPPWAAGACMALSSVSVVCSSLLLRRYKRPRLTTILKITVE | 1010 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 10644182 | 10650513 | - | CmoCh03G014860.1 | Cmo03g01486 | 378949 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo03g01486 | 1010 | TIGRFAM | TIGR00003: copper ion binding protein | 145 | 207 | IPR006122 | GO:0005507 | |
Cmo03g01486 | 1010 | TIGRFAM | TIGR00003: copper ion binding protein | 60 | 125 | IPR006122 | GO:0005507 | |
Cmo03g01486 | 1010 | CDD | HMA | 61 | 126 | IPR006121 | GO:0046872 | |
Cmo03g01486 | 1010 | Gene3D | - | 144 | 209 | - | - | |
Cmo03g01486 | 1010 | Gene3D | - | 57 | 130 | - | - | |
Cmo03g01486 | 1010 | SFLD | p-type atpase | 647 | 936 | IPR044492 | - | |
Cmo03g01486 | 1010 | CDD | HMA | 145 | 208 | IPR006121 | GO:0046872 | |
Cmo03g01486 | 1010 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 402 | 972 | IPR023298 | - | |
Cmo03g01486 | 1010 | SUPERFAMILY | HAD-like | 664 | 990 | IPR036412 | - | |
Cmo03g01486 | 1010 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 667 | 673 | IPR018303 | - | |
Cmo03g01486 | 1010 | CDD | P-type_ATPase_Cu-like | 306 | 980 | - | - | |
Cmo03g01486 | 1010 | PRINTS | H+-transporting ATPase (proton pump) signature | 884 | 900 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo03g01486 | 1010 | PRINTS | H+-transporting ATPase (proton pump) signature | 856 | 872 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo03g01486 | 1010 | PRINTS | H+-transporting ATPase (proton pump) signature | 915 | 940 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo03g01486 | 1010 | ProSitePatterns | Heavy-metal-associated domain. | 64 | 94 | IPR017969 | GO:0046872 | |
Cmo03g01486 | 1010 | ProSitePatterns | Heavy-metal-associated domain. | 148 | 177 | IPR017969 | GO:0046872 | |
Cmo03g01486 | 1010 | Pfam | Heavy-metal-associated domain | 62 | 124 | IPR006121 | GO:0046872 | |
Cmo03g01486 | 1010 | Pfam | Heavy-metal-associated domain | 146 | 206 | IPR006121 | GO:0046872 | |
Cmo03g01486 | 1010 | SUPERFAMILY | Calcium ATPase, transduction domain A | 465 | 551 | IPR008250 | - | |
Cmo03g01486 | 1010 | ProSiteProfiles | Heavy-metal-associated domain profile. | 143 | 209 | IPR006121 | GO:0046872 | |
Cmo03g01486 | 1010 | PANTHER | HEAVY METAL P-TYPE ATPASE | 24 | 1003 | - | - | |
Cmo03g01486 | 1010 | Gene3D | - | 632 | 941 | IPR023214 | - | |
Cmo03g01486 | 1010 | SUPERFAMILY | HMA, heavy metal-associated domain | 56 | 129 | IPR036163 | GO:0046872 | |
Cmo03g01486 | 1010 | Pfam | E1-E2 ATPase | 446 | 643 | - | - | |
Cmo03g01486 | 1010 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 418 | 966 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cmo03g01486 | 1010 | Gene3D | - | 433 | 555 | - | - | |
Cmo03g01486 | 1010 | TIGRFAM | ATPase-IB_hvy: heavy metal translocating P-type ATPase | 379 | 993 | IPR027256 | GO:0006812|GO:0016021|GO:0019829 | |
Cmo03g01486 | 1010 | Gene3D | - | 672 | 763 | IPR023299 | GO:0000166 | |
Cmo03g01486 | 1010 | Gene3D | - | 764 | 815 | IPR023299 | GO:0000166 | |
Cmo03g01486 | 1010 | SFLD | Haloacid Dehalogenase | 647 | 936 | - | - | |
Cmo03g01486 | 1010 | PANTHER | ATP7, ISOFORM B | 24 | 1003 | - | - | |
Cmo03g01486 | 1010 | Pfam | haloacid dehalogenase-like hydrolase | 661 | 898 | - | - | |
Cmo03g01486 | 1010 | ProSiteProfiles | Heavy-metal-associated domain profile. | 59 | 127 | IPR006121 | GO:0046872 | |
Cmo03g01486 | 1010 | PRINTS | P-type cation-transporting ATPase superfamily signature | 809 | 820 | - | - | |
Cmo03g01486 | 1010 | PRINTS | P-type cation-transporting ATPase superfamily signature | 501 | 515 | - | - | |
Cmo03g01486 | 1010 | PRINTS | P-type cation-transporting ATPase superfamily signature | 665 | 679 | - | - | |
Cmo03g01486 | 1010 | PRINTS | P-type cation-transporting ATPase superfamily signature | 831 | 841 | - | - | |
Cmo03g01486 | 1010 | PRINTS | P-type cation-transporting ATPase superfamily signature | 884 | 903 | - | - | |
Cmo03g01486 | 1010 | PRINTS | P-type cation-transporting ATPase superfamily signature | 907 | 919 | - | - | |
Cmo03g01486 | 1010 | SUPERFAMILY | HMA, heavy metal-associated domain | 143 | 213 | IPR036163 | GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g01486 | Cmo-Chr3:10644182 | Cmo07g01190 | Cmo-Chr7:6446516 | 1.33E-12 | dispersed | |
Cmo05g00742 | Cmo-Chr5:3902126 | Cmo03g01486 | Cmo-Chr3:10644182 | 7.61E-69 | dispersed | |
Cmo03g01486 | Cmo-Chr3:10644182 | Cmo07g00032 | Cmo-Chr7:204486 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo03g01486 | K17686 | - | csv:101205642 | 1791.93 |