Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo04g00068 | ATGGCTGAACTCTCGAATCTCTCCTCGAGCCCCAGTGAAGAAAGCGACAAGAACGTGCTGCAGAAACACGTGGCGTTCTTCGATAGGAACCATGACGGCGTCGTTTATCCATGGGAAACCTTCAAAGGCTTCCGAGCGATCGGGGCGGGTTTGTTTCTGTCCTCCGTCGGTGCTTTTTTTGTTAACATCGGACTCAGCTCCAAAACCCGACCCGGGAAATGTCCCAACTTTTTATTCCCAATTGTGATAAAGAACATTCACCTTGCCAAACATGGAAGTGATTCTGGTGTATATGATTCCGAAGGAAGGTTTGTTGCATTAAAATTTGAAGAAATTTTCAAAAAGCATGCCCTAACGTATCCGGATGCCTTAACCGAAAAAGAGGTTAAAGCAATGCTGAAAGCAAATAGAGAGCCGAAGGACTATAAGGGATGGATTGGTGCATGGGCAGAGTGGACAGGTCTATACATCCTTTGCAAAGATGAGAATGGATTGCTTACAAAGCAAACGGTGAAGGGTGTTTACGATGGAAGCTTATTCGAACATATGGAGAAACACAGAGTATCAAAGAAGAAGAAATGA | 582 | 44.5 | MAELSNLSSSPSEESDKNVLQKHVAFFDRNHDGVVYPWETFKGFRAIGAGLFLSSVGAFFVNIGLSSKTRPGKCPNFLFPIVIKNIHLAKHGSDSGVYDSEGRFVALKFEEIFKKHALTYPDALTEKEVKAMLKANREPKDYKGWIGAWAEWTGLYILCKDENGLLTKQTVKGVYDGSLFEHMEKHRVSKKKK | 193 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 370805 | 372386 | - | CmoCh04G000680.1 | Cmo04g00068 | 379043 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo04g00068 | 193 | PANTHER | INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED | 13 | 193 | - | - | |
| Cmo04g00068 | 193 | Pfam | Caleosin related protein | 16 | 183 | IPR007736 | - | |
| Cmo04g00068 | 193 | PANTHER | PEROXYGENASE 3-RELATED | 13 | 193 | IPR007736 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo05g00812 | Cmo-Chr5:4812889 | Cmo04g00068 | Cmo-Chr4:370805 | 1.51E-28 | transposed | |
| Cmo17g00143 | Cmo-Chr17:811225 | Cmo04g00068 | Cmo-Chr4:370805 | 1.06E-58 | transposed | |
| Cmo04g00068 | Cmo-Chr4:370805 | Cmo04g01096 | Cmo-Chr4:5550510 | 4.56E-104 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo04g00068 | K17991 | - | csv:101213829 | 316.235 |