Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00106 ATGGATCTTGAGCATGGAAACTGTTGGGACACTGACAAGAAGGGTTCTTGGAAAACGGTTCTTGTATTGGCCTATCAAAGTCTTGGCGTCGTCTATGGCGATTTGAGCATCTCTCCGCTCTACGTTTACAGAAGCACTTTTGCTGAAGACATCCAACATTCAGAGACCAATGAAGAAATCTATGGTGTTCTGTCATTTGTCTTCTGGACTCTCACTATTGTCCCCCTTTTCAAATACGTCTTCGTAGTTCTCAGAGCGGATGACAATGGCGAAGGTGGGACTTTTGCTCTGTACTCATTAATTTGCAGACATGCCAAAGTGAGCCTTCTTCCCAACAGACAAGTTGCAGATGAAGCACTTTCCACTTATTTACTTGAACATCCACCGGAGAAGAAGAAGCAATCTAAGGTTAAATTGCTGCTGGAGAAGCACAGTGCTCTGCACACTGCCTTGTTGATTCTTGTTCTTGTTGGGACTTGTATGGTGATTGGAGATGGGCTTCTCACTCCAGCCATTTCTGTTTTCTCAGCTGTTTCTGGACTTGAATTATCCATGACCAAGGCTCACCATCAGTATGCAGTGGTTCCAATCACATGCTTTATCTTGGTTTGTCTATTTGCACTTCAACACTATGGCACGCATCGTGTTGGCTTCTTCTTCGCTCCCGTTGTATTGATATGGCTACTCTGCATCAGTACCCTTGGCATATACAATATTATACAATGGAATCCACATGTTTATCAGGCTCTTTCTCCGTATTACATGTTCAAGTTTTTGGAGAAGACAAGGAAGAGCGGTTGGATGTCGTTGGGTGGAATATTGTTGTGCATAACAGGCTCAGAAGCTATGTTTGCTGATCTTGGTCACTTCTCATACACTGCAATACAGATTGCTTTCACCTTTCTGGTGTATCCAGCGCTCATATTGGCATACATGGGCCAAGCTGCTTACTTATCTCAACATCACACCACCACCAACAACATTGGCTTCTACGATTCTGTTCCAGAGAGTGTGAGATGGCCAGTGCTTATAATTGCTATACTTGCATCAGTAGTTGGAAGCCAAGCAATCATTAGTGGAACATTCTCCATTATTAACCAGAGCCAGTCCCTTGGGTGCTTCCCTAAGGTGAAGGTTGTTCATACTTCTGACAAGATCCATGGCCAAATCTACATTCCGGAGATCAATTGGGCTCTTATGATTCTCTGTGTTGCTGTTACCATTGGCTTTAGAGACATAAAACACCTCGGAAATGCATCGGGTCTAGCTGTAATGACTGTGATGCTTGTGACAACATGTCTTACATCTTTGGTGATTGTTCTCTGTTGGAACAAAACTCCCCTTTTGGCTCTCTCCTTTTTGATCTTCTTCGGGTCTGTTGAATTGCTCTACTTCTCAGCTTCACTCACCAAGTTCAGGGAGGGCGCTTGGCTCCCCATTCTCTTAGCTCTCTTCCTCATGACCATTATGTTTGTTTGGCACTATGCAACCATCAAGAAGTATGAATATGATCTTCACAACAAGGTTTCATTAGAATGGTTGCTAGCATTGGGACCAAGCCTTGGGATTGCTCGTGTCCCTGGCATTGGATTAGTCTTCACTGATCTCACCTCTGGTATTCCTGCCAACTTCTCCCGGTTTGTCACTAACCTCCCAGCATTCCATCGCATCCTTGTCTTCGTGTGTATAAAGTCGGTACCAGTTCCTTTTGTACCTCCTGCTGAGCGGTATCTTGTTGGACGAGTAGGCCCAGCAGCACATCGGTCATACCGGTGCATTGTTCGATATGGCTACCGTGATAATCACCAGGACGTGGATTCGTTTGAATCTGAATTAGTCAAGAAACTGGCAGACTTCATCAGCTATGACTGGTACAGAAAACAAAGAGGAAACTCTAGCAGTGAGGACGATGCATCATGTTCAAATGAATCAACAAGTGAGCGTAGGCTGGCTGTGATTGGAACCGTAGCATTTGCAGGTGCATCTGCTTATGAAGAGACTATGCAGCCTGCGAGCGGATCAGTCGGGTTCCAAACTGTCGACAGCATCACTGATGTGATCGAAATGGAGCCACTGGGAGAAAAAAAGAGAGTCAGGTTTGCTATAGACGATGATTTTGAAGGTGACTCCCAAGCTGAAACAGAAGCCCTTCTGCAGGAAGAGCTAGAAGATCTCGTAGCAGCCCAGCAATCAGGGACGGCGTTCATTCTCGGGCATTCACATGTCCGAGCTAAACAGGGATCGTCTCTGTTGAAGAGACTGGCTATTAACTATGGCTATAACTTTCTGAGAAGGAACTGCAGAGGCGCAGACGTTGCTCTTAAGGTGCCACCAGTGTCTCTTCTTGAAGTTGGCATGGTTTATGTTGTATAG 2373 45.22 MDLEHGNCWDTDKKGSWKTVLVLAYQSLGVVYGDLSISPLYVYRSTFAEDIQHSETNEEIYGVLSFVFWTLTIVPLFKYVFVVLRADDNGEGGTFALYSLICRHAKVSLLPNRQVADEALSTYLLEHPPEKKKQSKVKLLLEKHSALHTALLILVLVGTCMVIGDGLLTPAISVFSAVSGLELSMTKAHHQYAVVPITCFILVCLFALQHYGTHRVGFFFAPVVLIWLLCISTLGIYNIIQWNPHVYQALSPYYMFKFLEKTRKSGWMSLGGILLCITGSEAMFADLGHFSYTAIQIAFTFLVYPALILAYMGQAAYLSQHHTTTNNIGFYDSVPESVRWPVLIIAILASVVGSQAIISGTFSIINQSQSLGCFPKVKVVHTSDKIHGQIYIPEINWALMILCVAVTIGFRDIKHLGNASGLAVMTVMLVTTCLTSLVIVLCWNKTPLLALSFLIFFGSVELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATIKKYEYDLHNKVSLEWLLALGPSLGIARVPGIGLVFTDLTSGIPANFSRFVTNLPAFHRILVFVCIKSVPVPFVPPAERYLVGRVGPAAHRSYRCIVRYGYRDNHQDVDSFESELVKKLADFISYDWYRKQRGNSSSEDDASCSNESTSERRLAVIGTVAFAGASAYEETMQPASGSVGFQTVDSITDVIEMEPLGEKKRVRFAIDDDFEGDSQAETEALLQEELEDLVAAQQSGTAFILGHSHVRAKQGSSLLKRLAINYGYNFLRRNCRGADVALKVPPVSLLEVGMVYVV 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 568018 572709 + CmoCh04G001060.1 Cmo04g00106 379081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00106 790 TIGRFAM kup: potassium uptake protein 23 789 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g00106 790 PANTHER POTASSIUM TRANSPORTER 2 1 790 - -
Cmo04g00106 790 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 790 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo04g00106 790 Pfam K+ potassium transporter 25 600 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00106 Cmo04g01138 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00106 Cmo-Chr4:568018 Cmo11g01702 Cmo-Chr11:12075480 0 dispersed
Cmo04g00106 Cmo-Chr4:568018 Cmo04g01138 Cmo-Chr4:5807372 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00106 K03549 - csv:101211022 1468.75