Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo04g00186 ATGGGTTTTACTACGAATGTTCCTCGTGTAAAACAAGTTGAAAGCGACATAGTAGTGGGAGTTTTGGACACAGGAATCTGGCCGGAGTCTCCTAGCTTTAATGACGTAGGCTATGGCCCTCCACCAGCTAAATGGAAGGGCGCTTGCCAAACCTCAACCAACTTCCGTTGCAACAAAAAAATCATCGGAGCTCGAGCATACCGCAGTGACAACAATTTTCCTCCCGAAGACTTTAAAAGTCCAAGAGATTCAGAAGGCCACGGGACACACACGGCATCGACTGTGGCCGGTGGTCTCGTGAGCCAGGCAAGTTTATTCGGTCTTGCGCTTGGCACAGCTAGAGGAGGGGTTCCTTCCGCGCGCATTGCTGTGTACAAGATATGTTGGTCGGATGGGTGCGAGGATGCCGATATTCTTGCTGCATTTGACGACGCAATTGCCGATGGTGTCGATATCATATCTCTTTCAGTTGGGGGGAATGAACCCAAGTTTTACTTCAACGATTCAATTGCCATTGGAGCTTTCCATTCCATGAAGAATGGAATATTGACCTCCAACTCCGCTGGGAATGATGGCCCTGACTTCCTCACCATCAGAAATTTCTCTCCATGGTCTCTTTCTGTGGCTGCAAGCTCCATCGACAGAAAGTTGGTATCAAAAGTGCAGCTTGGCAACAATAATATCTTTCAGGTCATACTTTTTATCTTATTCGATCGCAACTTGGTGAAAGGAAAAATCCTTGTTTGCGATTCCATAGTATCTCCTTCAACATTTGCGTCCTTCAGTAGCGCGGTTGGCGTTGTTATGAATGATGCTGGCGTGAAAGATAACGCAAGGTCCTATCCCTTGCCTTCTTCCTACCTCGGCACAGTGGCTGGTAACAACATCAAAACCTACATGGGATCAAACAACTTTCCGACTGCAACGATTTTCAAGAGCAATGCAGTGAACGATACATCTGCTCCTATAGTCGTTTCCTTCTCCTCAAGAGGACCCAATCCTGAAACCTTGGACATTCTCAAGCCTGATTTGACTGCTCCTGGAGTTGAAATTCTCGCCGCATGGCCTCCCGATGCTCCGGTCTCCAGCGGAATCAGAGATTCAAGGTCGACGCTCTATAATATAATCTCGGGGACGTCGATGTCTTGCCCACATGCCACCGCAGCTGCAGTGTACGTAAAAACATTCCATCCCACCTGGTCTCCCGCTGCCATTAAGTCAGCTCTCATGACAACGGCTATTCCTTTGAATGTGGGACTCAATCCACAAGCAGAGTTCGCATATGGTGCTGGCCATATCGACCCACTAAAGGCAACGAATCCAGGGTTGGTCTACGATGCCAATGAGACTGACTACGTGAACTTCTTGTGTGGCCAAGGTTACTCCACCGCCATGGTACGGCGTCTCACCGGCGACGGCAGTGTTTGTACCGCCGCCAACTCCGGCAGAGTTTGGGATCTAAACTATCCCTCCTTTGCACTGTCCACCACTCCTTCAGAATCCATCAACCAATTCTTCACAAGAACACTCACAAACGTGGACACGGAAGCCTCCACATATACATCTAAGATCCTTGGCGCCCCAGAAGGGCTCACAATCACAGTGGACCCGCCGGCTCTGTCATTCAATGGCATTGGAGACAAGAAATCTTTCACGTTAACCATTGATGGAACCATCATCCAAACCATAGTGTCTGCTTCTGTGGTGTGGAGCGATGGCTCTCACAACGTGAGAAGCCCTATTACAATATACATTGTCAACAAAGCTTAA 1770 48.59 MGFTTNVPRVKQVESDIVVGVLDTGIWPESPSFNDVGYGPPPAKWKGACQTSTNFRCNKKIIGARAYRSDNNFPPEDFKSPRDSEGHGTHTASTVAGGLVSQASLFGLALGTARGGVPSARIAVYKICWSDGCEDADILAAFDDAIADGVDIISLSVGGNEPKFYFNDSIAIGAFHSMKNGILTSNSAGNDGPDFLTIRNFSPWSLSVAASSIDRKLVSKVQLGNNNIFQVILFILFDRNLVKGKILVCDSIVSPSTFASFSSAVGVVMNDAGVKDNARSYPLPSSYLGTVAGNNIKTYMGSNNFPTATIFKSNAVNDTSAPIVVSFSSRGPNPETLDILKPDLTAPGVEILAAWPPDAPVSSGIRDSRSTLYNIISGTSMSCPHATAAAVYVKTFHPTWSPAAIKSALMTTAIPLNVGLNPQAEFAYGAGHIDPLKATNPGLVYDANETDYVNFLCGQGYSTAMVRRLTGDGSVCTAANSGRVWDLNYPSFALSTTPSESINQFFTRTLTNVDTEASTYTSKILGAPEGLTITVDPPALSFNGIGDKKSFTLTIDGTIIQTIVSASVVWSDGSHNVRSPITIYIVNKA 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 942149 944969 - CmoCh04G001860.1 Cmo04g00186 379161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo04g00186 589 ProSitePatterns Serine proteases, subtilase family, serine active site. 378 388 IPR023828 -
Cmo04g00186 589 Gene3D Peptidase S8/S53 domain 318 452 IPR036852 GO:0004252|GO:0006508
Cmo04g00186 589 Gene3D Peptidase S8/S53 domain 16 213 IPR036852 GO:0004252|GO:0006508
Cmo04g00186 589 CDD Peptidases_S8_3 15 414 IPR034197 -
Cmo04g00186 589 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 238 584 IPR045051 -
Cmo04g00186 589 Gene3D - 214 230 - -
Cmo04g00186 589 Gene3D - 237 317 - -
Cmo04g00186 589 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 229 IPR045051 -
Cmo04g00186 589 CDD PA_subtilisin_like 238 310 - -
Cmo04g00186 589 Pfam Subtilase family 15 431 IPR000209 GO:0006508|GO:0008236
Cmo04g00186 589 PRINTS Subtilisin serine protease family (S8) signature 377 393 IPR015500 -
Cmo04g00186 589 PRINTS Subtilisin serine protease family (S8) signature 83 96 IPR015500 -
Cmo04g00186 589 PRINTS Subtilisin serine protease family (S8) signature 14 33 IPR015500 -
Cmo04g00186 589 Gene3D - 456 586 - -
Cmo04g00186 589 Pfam Fibronectin type-III domain 486 583 IPR041469 -
Cmo04g00186 589 MobiDBLite consensus disorder prediction 72 92 - -
Cmo04g00186 589 PANTHER PUTATIVE-RELATED 238 584 - -
Cmo04g00186 589 PANTHER PUTATIVE-RELATED 1 229 - -
Cmo04g00186 589 ProSiteProfiles Serine proteases, subtilase domain profile. 1 439 - -
Cmo04g00186 589 SUPERFAMILY Subtilisin-like 14 440 IPR036852 GO:0004252|GO:0006508
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g00186 Cmo04g01223 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00186 Cmo-Chr4:942149 Cmo04g00572 Cmo-Chr4:2848730 0 dispersed
Cmo04g00185 Cmo-Chr4:933658 Cmo04g00186 Cmo-Chr4:942149 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo04g00186 - - csv:101215626 960.288